PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr1	50513716	50513743	CAGE_peak_5_at_ELAVL4_5end
chr1	50513788	50513817	CAGE_peak_7_at_ELAVL4_5end
chr1	50569575	50569586	CAGE_peak_11_at_ELAVL4_5end
chr1	50571340	50571365	CAGE_peak_10_at_ELAVL4_5end
chr1	50571897	50571910	CAGE_peak_9_at_ELAVL4_5end
chr1	50571949	50571958	CAGE_peak_15_at_ELAVL4_5end
chr1	50574585	50574627	CAGE_peak_1_at_ELAVL4_5end
chr1	50575292	50575326	CAGE_peak_8_at_ELAVL4_5end
chr1	50575466	50575485	CAGE_peak_3_at_ELAVL4_5end
chr1	50575491	50575526	CAGE_peak_2_at_ELAVL4_5end
chr1	50575553	50575567	CAGE_peak_6_at_ELAVL4_5end
chr1	50575576	50575579	CAGE_peak_13_at_ELAVL4_5end
chr1	50575586	50575611	CAGE_peak_4_at_ELAVL4_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I050332	50332732	50334032	1.08	[{'connected_gene': 'RPS2P11', 'score': 12.09}, {'connected_gene': 'ENSG00000237337', 'score': 9.86}, {'connected_gene': 'ELAVL4', 'score': 9.82}, {'connected_gene': 'GC01M050274', 'score': 0.39}]
chr1	GH01I050716	50716922	50718214	0.75	[{'connected_gene': 'ELAVL4', 'score': 12.1}, {'connected_gene': 'LINC01562', 'score': 10.26}, {'connected_gene': 'DMRTA2', 'score': 4.63}, {'connected_gene': 'GC01M050693', 'score': 0.44}, {'connected_gene': 'GC01P050735', 'score': 0.39}, {'connected_gene': 'GC01P050737', 'score': 0.39}, {'connected_gene': 'GC01P050734', 'score': 0.39}, {'connected_gene': 'GC01P050738', 'score': 0.39}, {'connected_gene': 'GC01P050733', 'score': 0.39}, {'connected_gene': 'GC01P050736', 'score': 0.39}, {'connected_gene': 'GC01P050732', 'score': 0.39}, {'connected_gene': 'FAF1', 'score': 0.07}]
chr1	GH01I050115	50115684	50118821	0.38	[{'connected_gene': 'ELAVL4', 'score': 10.58}, {'connected_gene': 'ENSG00000233407', 'score': 10.53}, {'connected_gene': 'ENSG00000237337', 'score': 10.36}, {'connected_gene': 'ENSG00000230828', 'score': 0.77}, {'connected_gene': 'GC01M050123', 'score': 0.44}]
chr1	GH01I050106	50106182	50106241	0.93	[{'connected_gene': 'ELAVL4', 'score': 560.23}, {'connected_gene': 'ENSG00000237337', 'score': 10.21}, {'connected_gene': 'GC01P050110', 'score': 0.77}, {'connected_gene': 'GC01M050049', 'score': 0.34}]
chr1	GH01I050108	50108871	50108930	0.88	[{'connected_gene': 'ELAVL4', 'score': 560.67}, {'connected_gene': 'GC01P050110', 'score': 550.77}, {'connected_gene': 'ENSG00000237337', 'score': 10.67}, {'connected_gene': 'GC01M050049', 'score': 0.31}]
chr1	GH01I050103	50103860	50103919	0.99	[{'connected_gene': 'ELAVL4', 'score': 559.87}, {'connected_gene': 'ENSG00000237337', 'score': 9.84}, {'connected_gene': 'GC01P050110', 'score': 0.44}, {'connected_gene': 'GC01M050049', 'score': 0.34}]
chr1	GH01I050023	50023600	50024400	1.68	[{'connected_gene': 'LOC105378708', 'score': 550.77}, {'connected_gene': 'AGBL4', 'score': 550.77}, {'connected_gene': 'ELAVL4', 'score': 10.9}]
chr1	GH01I050271	50271389	50271538	0.43	[{'connected_gene': 'GC01P050269', 'score': 550.77}, {'connected_gene': 'ENSG00000233407', 'score': 11.21}, {'connected_gene': 'ENSG00000237337', 'score': 10.47}, {'connected_gene': 'ELAVL4', 'score': 10.39}, {'connected_gene': 'LOC105378712', 'score': 0.25}]
chr1	GH01I050048	50048006	50048065	0.73	[{'connected_gene': 'GC01M050048', 'score': 550.77}, {'connected_gene': 'GC01M050047', 'score': 550.77}, {'connected_gene': 'ELAVL4', 'score': 550.77}, {'connected_gene': 'LOC105378709', 'score': 0.37}, {'connected_gene': 'GC01M050046', 'score': 0.29}, {'connected_gene': 'GC01M050049', 'score': 0.29}]
chr1	GH01I050109	50109401	50111000	0.83	[{'connected_gene': 'GC01P050110', 'score': 550.77}, {'connected_gene': 'ELAVL4', 'score': 10.67}, {'connected_gene': 'ENSG00000237337', 'score': 10.67}, {'connected_gene': 'ENSG00000230828', 'score': 0.77}]
chr1	GH01I050154	50154236	50154483	0.22	[{'connected_gene': 'ENSG00000233407', 'score': 11.03}, {'connected_gene': 'ENSG00000237337', 'score': 0.34}, {'connected_gene': 'GC01M050123', 'score': 0.31}, {'connected_gene': 'ELAVL4', 'score': 0.14}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000448907	[[50513685, 50513854], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50667540]]	[[50513836, 50513854], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
ENST00000371827	[[50569581, 50569672], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50669442]]	[[50569663, 50569672], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
ENST00000463650	[[50571361, 50571622], [50610628, 50610856]]	None
ENST00000357083	[[50571963, 50572065], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50667071]]	[[50572005, 50572065], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
ENST00000371824	[[50574604, 50574870], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50669458]]	[[50574861, 50574870], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
ENST00000371823	[[50574637, 50574870], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666480, 50667074]]	[[50574861, 50574870], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666480, 50666850]]
ENST00000371821	[[50575297, 50575636], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666480, 50668726]]	[[50575612, 50575636], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666480, 50666850]]
ENST00000371819	[[50575377, 50575636], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50667966]]	[[50575612, 50575636], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
ENST00000494555	[[50575487, 50575636], [50607443, 50607530], [50610628, 50610850]]	None
ENST00000492299	[[50610624, 50610869], [50642760, 50642864], [50645215, 50646972]]	None
ENST00000474675	[[50642801, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663257]]	None
NM_001144777	[[50513685, 50513854], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50669458]]	[[50513836, 50513854], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
NM_001324208	[[50513685, 50513854], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666480, 50669458]]	[[50513836, 50513854], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666480, 50666850]]
NM_001144776	[[50569581, 50569672], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50669458]]	[[50569663, 50569672], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
NM_001144775	[[50571936, 50572065], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50669458]]	[[50571948, 50572065], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
NM_001324216	[[50574591, 50574870], [50610628, 50610869], [50642760, 50642864], [50645215, 50646972]]	[[50574861, 50574870], [50610628, 50610869], [50642760, 50642864], [50645215, 50645248]]
NM_001144774	[[50574591, 50574870], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50669458]]	[[50574861, 50574870], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
NM_021952	[[50574591, 50574870], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666480, 50669458]]	[[50574861, 50574870], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666480, 50666850]]
NM_001324209	[[50574591, 50574870], [50607443, 50607530], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50666522, 50669458]]	[[50607524, 50607530], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50666522, 50666850]]
NM_001324212	[[50574591, 50574870], [50607443, 50607530], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50669458]]	[[50607524, 50607530], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
NM_001324217	[[50575287, 50575636], [50610628, 50610869], [50642760, 50642864], [50645215, 50646972]]	[[50575612, 50575636], [50610628, 50610869], [50642760, 50642864], [50645215, 50645248]]
NR_136725	[[50575287, 50575636], [50607443, 50607530], [50610628, 50610869], [50642760, 50642864], [50645215, 50646972]]	None
NM_001324215	[[50575287, 50575636], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50666522, 50669458]]	[[50575612, 50575636], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50666522, 50666850]]
NM_001294348	[[50575287, 50575636], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50669458]]	[[50575612, 50575636], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]
NM_001324213	[[50575287, 50575636], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666480, 50669458]]	[[50575612, 50575636], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666480, 50666850]]
NM_001324214	[[50575287, 50575636], [50607443, 50607530], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50669458]]	[[50607524, 50607530], [50610628, 50610869], [50642760, 50642864], [50659436, 50659590], [50661232, 50661458], [50663100, 50663139], [50666522, 50666850]]