PPI network (data source: BioGrid)

Symbol A GeneA coding DNM count Symbol B GeneB coding DNM count Interaction detection method Publication Evidence
NTRK1 1 CSE1L 1 affinity chromatography technology Emdal KB (2015) 1
ATP6V1A 3 VCL 6 biochemical Havugimana PC (2012) 1
CBX8 3 UBR1 3 affinity chromatography technology Vandamme J (2011) 1
NPB 0 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
UBE2B 3 UBR1 3 two hybrid, affinity chromatography technology Stelzl U (2005), Hong JH (2015) 2
NXF1 0 PFAS 3 affinity chromatography technology Castello A (2012) 1
HNRNPA1 1 GADD45A 1 affinity chromatography technology Roy R (2014) 1
NTRK1 1 UBC 7 affinity chromatography technology Emdal KB (2015) 1
UBC 7 UBR1 3 affinity chromatography technology Bish RA (2007) 1
UBC 7 TAC3 0 pull down Nathan JA (2013) 1
NTRK1 1 VCL 6 affinity chromatography technology Emdal KB (2015) 1
FAF2 4 UBXN7 3 affinity chromatography technology, affinity chromatography technology Raman M (2015), Raman M (2015) 2
PFAS 3 VCL 6 biochemical Kristensen AR (2012) 1
USP5 2 UCHL3 1 biochemical Havugimana PC (2012) 1
VIM 0 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
SIL1 1 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
XPO1 8 VCL 6 biochemical Kristensen AR (2012) 1
UBE2D1 0 UBE2B 3 biochemical Havugimana PC (2012) 1
GADD45A 1 VIM 0 two hybrid Vinayagam A (2011) 1
PPP1R32 0 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
CDC42 3 UBR1 3 two hybrid Stelzl U (2005) 1
PRSS23 1 RECQL4 5 two hybrid Stelzl U (2005) 1
DNPH1 1 UBR1 3 biochemical Havugimana PC (2012) 1
UBXN1 0 UBC 7 pull down, pull down, affinity chromatography technology, pull down, pull down, pull down Wu-Baer F (2010), Fenner BJ (2009), Alexandru G (2008), LaLonde DP (2011), McNeill H (2004), Zhang X (2017) 6
HNRNPA1 1 POLDIP3 0 affinity chromatography technology Roy R (2014) 1
FAF1 1 CUL2 3 affinity chromatography technology, affinity chromatography technology Alexandru G (2008), Alexandru G (2008) 2
NSFL1C 1 UBR1 3 affinity chromatography technology Alexandru G (2008) 1
PFAS 3 UBR1 3 biochemical Havugimana PC (2012) 1
UBXN7 3 UBR1 3 affinity chromatography technology, affinity chromatography technology Alexandru G (2008), Alexandru G (2008) 2
DMTN 3 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
NXPH2 0 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
UBE2A 0 UBE2B 3 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Hong JH (2015), Hong JH (2015), Huttlin EL (2017) 3
TIRAP 1 UBR1 3 affinity chromatography technology Li S (2011) 1
UBC 7 FAF2 4 affinity chromatography technology, affinity chromatography technology Bish RA (2007), Alexandru G (2008) 2
NXF1 0 UBR1 3 affinity chromatography technology Castello A (2012) 1
BTBD2 4 UBR1 3 two hybrid Stelzl U (2005) 1
UBE2D1 0 UBXN7 3 biochemical Havugimana PC (2012) 1
BRCA1 7 XPO1 8 affinity chromatography technology Ertych N (2016) 1
UBXN7 3 UCHL3 1 biochemical Havugimana PC (2012) 1
NTRK1 1 ATP6V1A 3 affinity chromatography technology Emdal KB (2015) 1
UBXN7 3 NSFL1C 1 affinity chromatography technology, affinity chromatography technology Raman M (2015), Raman M (2015) 2
ARL3 1 UBR1 3 two hybrid Stelzl U (2005) 1
CROCC 8 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
RABGEF1 1 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
XPO1 8 VIM 0 affinity chromatography technology Kirli K (2015) 1
NTRK1 1 XPO1 8 affinity chromatography technology Emdal KB (2015) 1
UBR1 3 ATP6V1A 3 biochemical Havugimana PC (2012) 1
CLCC1 4 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
UBC 7 UBE2B 3 affinity chromatography technology, affinity chromatography technology Bish RA (2007), Hong JH (2015) 2
HNRNPA1 1 CDC42 3 biochemical Wan C (2015) 1
CUL2 3 UBC 7 affinity chromatography technology, affinity chromatography technology, enzymatic study Bennett EJ (2010), Bish RA (2007), Wu K (2016) 3
BCL2L1 0 UBR1 3 two hybrid Vinayagam A (2011) 1
UBXN7 3 FAF1 1 affinity chromatography technology, affinity chromatography technology Raman M (2015), Raman M (2015) 2
NTRK1 1 UBXN7 3 affinity chromatography technology Emdal KB (2015) 1
BRCA1 7 HNRNPA1 1 affinity chromatography technology Goina E (2008) 1
RECQL4 5 UBR1 3 biochemical, affinity chromatography technology, affinity chromatography technology Yin J (2004), Yin J (2004), Yin J (2004) 3
CUL2 3 UBE2D1 0 pull down, affinity chromatography technology, pull down Sufan RI (2006), Sufan RI (2006), Maine GN (2007) 3
GFAP 0 NXF1 0 two hybrid Rolland T (2014) 1
LIPT1 1 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
ITM2B 2 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
UBXN1 0 CSE1L 1 biochemical Havugimana PC (2012) 1
CDC42 3 UBC 7 two hybrid Bandyopadhyay S (2010) 1
INSL5 0 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
FGL1 3 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
NXF1 0 XPO1 8 affinity chromatography technology Bachi A (2000) 1
NES 2 VIM 0 affinity chromatography technology, affinity chromatography technology Hein MY (2015), Huttlin EL (2017) 2
TAC3 0 UBR1 3 two hybrid Stelzl U (2005) 1
SEM1 0 NSFL1C 1 affinity chromatography technology Besche HC (2014) 1
ANXA3 0 UBR1 3 two hybrid Stelzl U (2005) 1
NXF1 0 UBXN1 0 affinity chromatography technology Castello A (2012) 1
UBXN1 0 BTBD2 4 affinity chromatography technology Alexandru G (2008) 1
NXF1 0 NES 2 affinity chromatography technology Castello A (2012) 1
TP53I3 1 UBR1 3 two hybrid Stelzl U (2005) 1
HNRNPA1 1 UBR1 3 affinity chromatography technology Jeronimo C (2007) 1
UBC 7 RABGEF1 1 affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, two hybrid, pull down, pull down, pull down Mattera R (2004), La Rosa P (2011), Kalesnikoff J (2007), Penengo L (2006), Sokratous K (2012), Rolland T (2014), Mattera R (2006), Zhang X (2017), Kristariyanto YA (2017) 9
NTRK1 1 UBR1 3 affinity chromatography technology Emdal KB (2015) 1
GADD45A 1 UBR1 3 two hybrid Vinayagam A (2011) 1
GFAP 0 NES 2 affinity chromatography technology Huttlin EL (2017) 1
USP5 2 ZNF593 1 biochemical Havugimana PC (2012) 1
GSK3B 1 BCL2L1 0 enzymatic study Wang J (2012) 1
SCML4 3 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
FOS 0 UBR1 3 affinity chromatography technology, affinity chromatography technology, pull down Sasaki T (2006), Sasaki T (2006), Sasaki T (2006) 3
SPINK2 1 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
DNAJB11 3 UBXN1 0 biochemical Havugimana PC (2012) 1
UBE2B 3 UBXN7 3 biochemical Havugimana PC (2012) 1
GFAP 0 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
BRCA1 7 CSE1L 1 affinity chromatography technology Ertych N (2016) 1
BRCA1 7 CUL2 3 affinity chromatography technology Ertych N (2016) 1
MRM1 1 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
UBR1 3 ZNF593 1 biochemical Havugimana PC (2012) 1
BRCA1 7 UBR1 3 affinity chromatography technology Ertych N (2016) 1
NTRK1 1 RABGEF1 1 affinity chromatography technology Emdal KB (2015) 1
NXF1 0 UBE2Z 0 affinity chromatography technology Castello A (2012) 1
GSK3B 1 UBE2D1 0 two hybrid Vinayagam A (2011) 1
NTRK1 1 USP5 2 affinity chromatography technology Emdal KB (2015) 1
ADAMTS12 2 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
USP5 2 UBR1 3 biochemical Havugimana PC (2012) 1
UBE2D1 0 UBC 7 x-ray crystallography Bosanac I (2010) 1
CUL2 3 HNRNPA1 1 affinity chromatography technology Bennett EJ (2010) 1
UBR1 3 VCL 6 biochemical Havugimana PC (2012) 1
PNLIPRP1 2 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
LDLRAD4 1 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
SEM1 0 CUL2 3 affinity chromatography technology Besche HC (2014) 1
SEM1 0 BRCA1 7 two hybrid Gudmundsdottir K (2007) 1
DNAJB11 3 FAF1 1 two hybrid Vinayagam A (2011) 1
DNAJB11 3 UBR1 3 two hybrid, two hybrid Stelzl U (2005), Vinayagam A (2011) 2
NTRK1 1 HNRNPA1 1 affinity chromatography technology Emdal KB (2015) 1
EPN3 2 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
UBR1 3 CDC6 0 pull down Madura K (1993) 1
GSK3B 1 NSFL1C 1 two hybrid Vinayagam A (2011) 1
FAF2 4 CUL2 3 affinity chromatography technology, affinity chromatography technology Alexandru G (2008), Alexandru G (2008) 2
CRHBP 2 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
NTRK1 1 DNAJB11 3 affinity chromatography technology Emdal KB (2015) 1
SEM1 0 UBC 7 affinity chromatography technology Besche HC (2014) 1
USP5 2 UBC 7 pull down, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, pull down, pull down, pull down, pull down, pull down, pull down, unspecified method, affinity chromatography technology, pull down, x-ray crystallography, pull down, pull down, pull down, enzymatic study, enzymatic study, pull down, pull down Reyes-Turcu FE (2008), Nicassio F (2007), Zhang YH (2012), Bremm A (2010), Komander D (2009), Melandri F (1996), Sokratous K (2012), Fenner BJ (2009), Schulz S (2012), Raasi S (2005), Nathan JA (2013), Ernst A (2013), Bish RA (2007), Reyes-Turcu FE (2006), Reyes-Turcu FE (2006), Zhang YH (2012), Liu Y (2014), Scott D (2015), Flierman D (2016), Castaneda CA (2016), Zhang X (2017), Kwasna D (2018) 22
NXF1 0 UBC 7 affinity chromatography technology Castello A (2012) 1
UCHL3 1 CSE1L 1 biochemical Havugimana PC (2012) 1
NXF1 0 DMTN 3 affinity chromatography technology Castello A (2012) 1
RABGEF1 1 UBE2D1 0 pull down Kalesnikoff J (2007) 1
UBR1 3 UCHL3 1 biochemical Havugimana PC (2012) 1
USP5 2 ATP6V1A 3 biochemical Havugimana PC (2012) 1
CRH 1 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
UBXN1 0 BRCA1 7 affinity chromatography technology, pull down Wu-Baer F (2010), Wu-Baer F (2010) 2
ARL15 0 UBR1 3 two hybrid Stelzl U (2005) 1
GFAP 0 VIM 0 two hybrid, affinity chromatography technology Rual JF (2005), Huttlin EL (2017) 2
GSK3B 1 VIM 0 two hybrid Vinayagam A (2011) 1
CCDC130 1 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
UBR1 3 CSE1L 1 biochemical Havugimana PC (2012) 1
NXF1 0 CUL2 3 affinity chromatography technology Castello A (2012) 1
UBE2D1 0 FOS 0 enzymatic study Stancovski I (1995) 1
FAF1 1 UBC 7 pull down, affinity chromatography technology, unspecified method, pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical Song EJ (2005), Lee JJ (2012), Song J (2009), Song J (2009), Song J (2009), Lee JJ (2013), Lee JJ (2013), Nathan JA (2013), Baron Y (2014), Alexandru G (2008), Lee JJ (2012) 11
NTRK1 1 PFAS 3 affinity chromatography technology Emdal KB (2015) 1
POLDIP3 0 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
UBXN1 0 UBR1 3 affinity chromatography technology, affinity chromatography technology Alexandru G (2008), Alexandru G (2008) 2
HNRNPA1 1 NXF1 0 affinity chromatography technology Roy R (2014) 1
DNPH1 1 ZNF593 1 biochemical Havugimana PC (2012) 1
LAMA4 8 UBR1 3 two hybrid Stelzl U (2005) 1
GADD45A 1 UBE2D1 0 two hybrid Vinayagam A (2011) 1
UBE2A 0 UBR1 3 two hybrid, affinity chromatography technology Vinayagam A (2011), Hong JH (2015) 2
XPO1 8 GSK3B 1 affinity chromatography technology Kirli K (2015) 1
UBC 7 BRCA1 7 pull down, enzymatic study Sobhian B (2007), Zhao GY (2007) 2
FTH1 0 UBR1 3 two hybrid Stelzl U (2005) 1
UBR1 3 XPO1 8 biochemical Havugimana PC (2012) 1
NSFL1C 1 FAF1 1 affinity chromatography technology Raman M (2015) 1
NDUFA4L2 0 UBR1 3 two hybrid Stelzl U (2005) 1
NUDT3 0 UBR1 3 two hybrid Vinayagam A (2011) 1
UBXN1 0 FAF1 1 affinity chromatography technology Raman M (2015) 1
UBXN7 3 CUL2 3 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology Alexandru G (2008), Alexandru G (2008), Bandau S (2012), Besten Wd (2012), Besten Wd (2012), Bennett EJ (2010), Besten Wd (2012), Raman M (2015) 8
NXF1 0 USP5 2 affinity chromatography technology Castello A (2012) 1
BMP7 3 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
FAF2 4 UBE2D1 0 pull down Phan VT (2010) 1
PRSS23 1 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
UBXN1 0 NSFL1C 1 biochemical Kristensen AR (2012) 1
XPO1 8 CSE1L 1 biochemical Havugimana PC (2012) 1
UBC 7 UBXN7 3 pull down, affinity chromatography technology, pull down, affinity chromatography technology Kelsall IR (2013), Alexandru G (2008), Besten Wd (2012), Besten Wd (2012) 4
NTRK1 1 FAF1 1 affinity chromatography technology Emdal KB (2015) 1
UBE2D1 0 UBR1 3 biochemical You J (2001) 1
UBXN1 0 FAF2 4 affinity chromatography technology Raman M (2015) 1
UBE2A 0 UBXN1 0 biochemical Wan C (2015) 1
SPATA24 0 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
FAF2 4 UBR1 3 affinity chromatography technology, affinity chromatography technology Alexandru G (2008), Alexandru G (2008) 2
MRM1 1 CUL2 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
UBE2A 0 UBC 7 affinity chromatography technology Hong JH (2015) 1
FAF1 1 UBR1 3 affinity chromatography technology, affinity chromatography technology Alexandru G (2008), Alexandru G (2008) 2
UBXN1 0 UBXN7 3 affinity chromatography technology Raman M (2015) 1
NXF1 0 POLDIP3 0 affinity chromatography technology Castello A (2012) 1
NTRK1 1 VIM 0 affinity chromatography technology Emdal KB (2015) 1
PSG1 0 UBR1 3 affinity chromatography technology Huttlin EL (2015) 1
DLEU1 0 UBR1 3 two hybrid Stelzl U (2005) 1
UBE2A 0 CSE1L 1 biochemical Havugimana PC (2012) 1
NES 2 MRM1 1 affinity chromatography technology Hein MY (2015) 1
UBXN1 0 ATP6V1A 3 biochemical Havugimana PC (2012) 1
NTRK1 1 CUL2 3 affinity chromatography technology Emdal KB (2015) 1
NSFL1C 1 CUL2 3 affinity chromatography technology Alexandru G (2008) 1
PTPRS 15 UBR1 3 two hybrid Stelzl U (2005) 1
PFAS 3 ZNF593 1 biochemical Havugimana PC (2012) 1
BRCA1 7 UBE2D1 0 pull down, pull down, pull down, pull down, pull down, pull down, two hybrid, x-ray crystallography, pull down, two hybrid, pull down, pull down, pull down, pull down Mallery DL (2002), Brzovic PS (2003), Nishikawa H (2004), Dong Y (2003), Wu-Baer F (2003), Hashizume R (2001), Christensen DE (2009), Christensen DE (2009), Christensen DE (2009), Morris JR (2006), Vandenberg CJ (2003), Morris JR (2006), Nhukeaw T (2014), Thakar A (2010) 14
SERPINB9 0 UBR1 3 two hybrid Stelzl U (2005) 1
UBE2Z 0 UBR1 3 affinity chromatography technology Lee PC (2011) 1
ATP6V1A 3 CSE1L 1 biochemical, biochemical Havugimana PC (2012), Wan C (2015) 2
UBE2Z 0 XPO1 8 biochemical Havugimana PC (2012) 1
SEM1 0 UBR1 3 affinity chromatography technology Besche HC (2014) 1
GSK3B 1 UBR1 3 two hybrid Vinayagam A (2011) 1
UBC 7 NSFL1C 1 pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down Fenner BJ (2009), Shibata Y (2012), Alexandru G (2008), Raasi S (2005), Zhang X (2017) 5
NXF1 0 NUDT3 0 affinity chromatography technology Castello A (2012) 1
PDGFD 1 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
UCHL3 1 UBC 7 enzymatic study, enzymatic study, enzymatic study, x-ray crystallography, pull down, x-ray crystallography, pull down, enzymatic study, pull down, pull down, enzymatic study, enzymatic study, pull down, pull down, enzymatic study, pull down, pull down Bremm A (2010), Boudreaux D (2012), Misaghi S (2005), Misaghi S (2005), Wilkinson KD (1999), Wilkinson KD (1999), Phillips AH (2013), Larsen CN (1998), Wada H (1998), Hemelaar J (2004), Altun M (2015), Flierman D (2016), Zhang X (2017), Kwasna D (2018), Lee YC (2017), Lee YC (2017), Hanpude P (2017) 17
FAF2 4 CSE1L 1 affinity chromatography technology Christianson JC (2012) 1
NRP1 2 UBR1 3 affinity chromatography technology Huttlin EL (2017) 1
ARL4D 0 UBR1 3 two hybrid Stelzl U (2005) 1
UCHL3 1 ZNF593 1 biochemical Havugimana PC (2012) 1
XPO1 8 HNRNPA1 1 affinity chromatography technology Kirli K (2015) 1
LAMTOR3 0 UBR1 3 two hybrid Vinayagam A (2011) 1
ATP6V1A 3 ZNF593 1 biochemical Havugimana PC (2012) 1
UBXN1 0 CUL2 3 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Alexandru G (2008), Alexandru G (2008), Bennett EJ (2010) 3
NTRK1 1 PTPRS 15 affinity chromatography technology Emdal KB (2015) 1
UBE2A 0 UCHL3 1 biochemical Havugimana PC (2012) 1
HNRNPA1 1 BCL2L1 0 unspecified method Roy R (2014) 1
TGFB1 2 UBR1 3 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
BRCA1 7 VCL 6 affinity chromatography technology Ertych N (2016) 1
NES 2 UBR1 3 affinity chromatography technology Hein MY (2015) 1
NTRK1 1 NES 2 affinity chromatography technology Emdal KB (2015) 1
SPRY2 4 UBR1 3 two hybrid Vinayagam A (2011) 1
CUL2 3 UBR1 3 affinity chromatography technology Bennett EJ (2010) 1