Visualization of regulatory element with DNMs in transcripts



Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.

Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000545030 [[73518057, 73519909], [73520309, 73520829]] [[73518584, 73519909], [73520309, 73520754]]
ENST00000436467 [[73518061, 73519909], [73520309, 73520833]] [[73518584, 73519909], [73520309, 73520445]]
NM_001965 [[73518056, 73519909], [73520309, 73520829]] [[73518584, 73519909], [73520309, 73520754]]
Promoter
Chrom Start End Description
chr2 73520667 73520683 CAGE_peak_1_at_EGR4_5end

Enhancer
Chrom Start End Genehancer ID Score Attributes
chr2 GH02I073291 73291233 73291382 0.87 [{'connected_gene': 'EGR4', 'score': 0.77}, {'connected_gene': 'FBXO41', 'score': 0.44}]
chr2 GH02I073293 73293613 73293826 1.29 [{'connected_gene': 'EGR4', 'score': 550.77}, {'connected_gene': 'RNU6-111P', 'score': 0.77}]
chr2 GH02I073283 73283211 73285862 1.41 [{'connected_gene': 'FBXO41', 'score': 550.77}, {'connected_gene': 'EGR4', 'score': 0.44}]
chr2 GH02I073175 73175043 73178265 1.56 [{'connected_gene': 'SMYD5', 'score': 21.01}, {'connected_gene': 'ALMS1', 'score': 14.1}, {'connected_gene': 'DUSP11', 'score': 13.27}, {'connected_gene': 'SFXN5', 'score': 12.86}, {'connected_gene': 'PRADC1', 'score': 11.86}, {'connected_gene': 'NOTO', 'score': 11.63}, {'connected_gene': 'SPR', 'score': 11.18}, {'connected_gene': 'ENSG00000273245', 'score': 11.14}, {'connected_gene': 'EMX1', 'score': 10.46}, {'connected_gene': 'CCT7', 'score': 5.09}, {'connected_gene': 'EGR4', 'score': 1.45}, {'connected_gene': 'GC02P073186', 'score': 0.44}, {'connected_gene': 'RAB11FIP5', 'score': 0.37}]