PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000262442	[[11501747, 11502232], [11511445, 11511642], [11513712, 11513871], [11514966, 11515097], [11520727, 11520939], [11522864, 11523098], [11532733, 11532901], [11535903, 11536020], [11539950, 11540101], [11543586, 11543701], [11547947, 11548016], [11550388, 11550515], [11554385, 11554641], [11556077, 11556319], [11568149, 11568285], [11572380, 11572577], [11572686, 11573111], [11583073, 11583296], [11584039, 11584206], [11592882, 11593753], [11597184, 11597315], [11597637, 11597764], [11603047, 11603200], [11604438, 11604564], [11607519, 11607759], [11608341, 11608502], [11622650, 11622807], [11631134, 11631239], [11642196, 11642354], [11645491, 11645630], [11648113, 11648401], [11650872, 11651083], [11656149, 11656277], [11659884, 11659993], [11660861, 11661009], [11666756, 11666931], [11671769, 11671943], [11672438, 11672646], [11684325, 11684491], [11686962, 11687065], [11687616, 11687856], [11696819, 11696981], [11700913, 11701110], [11711048, 11711211], [11713562, 11713686], [11725236, 11725379], [11725754, 11725916], [11726117, 11726351], [11737954, 11738215], [11757319, 11757745], [11772450, 11772570], [11774914, 11775103], [11778265, 11778501], [11783394, 11783517], [11784525, 11784730], [11786902, 11787067], [11790141, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11833182, 11833410], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11873065]]	[[11501815, 11502232], [11511445, 11511642], [11513712, 11513871], [11514966, 11515097], [11520727, 11520939], [11522864, 11523098], [11532733, 11532901], [11535903, 11536020], [11539950, 11540101], [11543586, 11543701], [11547947, 11548016], [11550388, 11550515], [11554385, 11554641], [11556077, 11556319], [11568149, 11568285], [11572380, 11572577], [11572686, 11573111], [11583073, 11583296], [11584039, 11584206], [11592882, 11593753], [11597184, 11597315], [11597637, 11597764], [11603047, 11603200], [11604438, 11604564], [11607519, 11607759], [11608341, 11608502], [11622650, 11622807], [11631134, 11631239], [11642196, 11642354], [11645491, 11645630], [11648113, 11648401], [11650872, 11651083], [11656149, 11656277], [11659884, 11659993], [11660861, 11661009], [11666756, 11666931], [11671769, 11671943], [11672438, 11672646], [11684325, 11684491], [11686962, 11687065], [11687616, 11687856], [11696819, 11696981], [11700913, 11701110], [11711048, 11711211], [11713562, 11713686], [11725236, 11725379], [11725754, 11725916], [11726117, 11726351], [11737954, 11738215], [11757319, 11757745], [11772450, 11772570], [11774914, 11775103], [11778265, 11778501], [11783394, 11783517], [11784525, 11784730], [11786902, 11787067], [11790141, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11833182, 11833410], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11872844]]
ENST00000454412	[[11501815, 11502232], [11511445, 11511642], [11513712, 11513871], [11514966, 11515097], [11520727, 11520939], [11522864, 11523098], [11532733, 11532901], [11535903, 11536020], [11539950, 11540101], [11543586, 11543701], [11547947, 11548016], [11550388, 11550515], [11554385, 11554641], [11556077, 11556319], [11568149, 11568285], [11572380, 11572577], [11572686, 11573111], [11583073, 11583296], [11584039, 11584206], [11592882, 11593753], [11597184, 11597315], [11597637, 11597764], [11603047, 11603200], [11604438, 11604564], [11607519, 11607759], [11608341, 11608502], [11622650, 11622807], [11631134, 11631239], [11642196, 11642354], [11645491, 11645630], [11648113, 11648401], [11650872, 11651083], [11656149, 11656277], [11659884, 11659993], [11660861, 11661009], [11666756, 11666931], [11671769, 11671943], [11672438, 11672646], [11684325, 11684491], [11686962, 11687065], [11687616, 11687856], [11696819, 11696981], [11700913, 11701110], [11711048, 11711211], [11713562, 11713686], [11725236, 11725379], [11725754, 11725916], [11726117, 11726351], [11737954, 11738215], [11757319, 11757745], [11772450, 11772570], [11774914, 11775103], [11778265, 11778501], [11783394, 11783517], [11784525, 11784730], [11786902, 11787067], [11790141, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11873063]]	[[11501815, 11502232], [11511445, 11511642], [11513712, 11513871], [11514966, 11515097], [11520727, 11520939], [11522864, 11523098], [11532733, 11532901], [11535903, 11536020], [11539950, 11540101], [11543586, 11543701], [11547947, 11548016], [11550388, 11550515], [11554385, 11554641], [11556077, 11556319], [11568149, 11568285], [11572380, 11572577], [11572686, 11573111], [11583073, 11583296], [11584039, 11584206], [11592882, 11593753], [11597184, 11597315], [11597637, 11597764], [11603047, 11603200], [11604438, 11604564], [11607519, 11607759], [11608341, 11608502], [11622650, 11622807], [11631134, 11631239], [11642196, 11642354], [11645491, 11645630], [11648113, 11648401], [11650872, 11651083], [11656149, 11656277], [11659884, 11659993], [11660861, 11661009], [11666756, 11666931], [11671769, 11671943], [11672438, 11672646], [11684325, 11684491], [11686962, 11687065], [11687616, 11687856], [11696819, 11696981], [11700913, 11701110], [11711048, 11711211], [11713562, 11713686], [11725236, 11725379], [11725754, 11725916], [11726117, 11726351], [11737954, 11738215], [11757319, 11757745], [11772450, 11772570], [11774914, 11775103], [11778265, 11778501], [11783394, 11783517], [11784525, 11784730], [11786902, 11787067], [11790141, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11872844]]
ENST00000608377	[[11786218, 11786489], [11786902, 11787067], [11790141, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11833182, 11833410], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11873065]]	[[11790234, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11833182, 11833410], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11872844]]
ENST00000396001	[[11786220, 11786489], [11786902, 11787067], [11790141, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11833182, 11833410], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11873065]]	None
ENST00000581682	[[11787650, 11787902], [11790141, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11828476, 11828778]]	None
ENST00000579828	[[11501786, 11502232], [11511445, 11511642], [11513712, 11513871], [11514966, 11516150]]	[[11501815, 11502232], [11511445, 11511642], [11513712, 11513871], [11514966, 11515153]]
ENST00000579406	[[11501788, 11502232], [11511445, 11511642], [11513712, 11513871], [11514966, 11515097], [11520727, 11520939], [11522864, 11523098], [11532733, 11532901], [11533470, 11533831]]	None
ENST00000579602	[[11513833, 11513871], [11514966, 11515097], [11515891, 11516151]]	[[11513833, 11513871], [11514966, 11515097], [11515891, 11515986]]
ENST00000579813	[[11515078, 11515097], [11515859, 11516153]]	[[11515078, 11515097], [11515859, 11515972]]
ENST00000585197	[[11520716, 11520939], [11522864, 11523251]]	None
ENST00000583192	[[11607516, 11607759], [11608341, 11608810]]	None
ENST00000584663	[[11626425, 11626790], [11631134, 11631310]]	None
ENST00000578834	[[11756508, 11756562], [11757319, 11757745], [11772450, 11772512]]	None
ENST00000579703	[[11757370, 11757745], [11772450, 11772570], [11778265, 11778501], [11783394, 11783517]]	[[11757370, 11757745], [11772450, 11772570], [11778265, 11778501], [11783394, 11783517]]
ENST00000580255	[[11776746, 11776769], [11778265, 11778501], [11783394, 11783517], [11784525, 11784689]]	None
NM_001372	[[11501747, 11502232], [11511445, 11511642], [11513712, 11513871], [11514966, 11515097], [11520727, 11520939], [11522864, 11523098], [11532733, 11532901], [11535903, 11536020], [11539950, 11540101], [11543586, 11543701], [11547947, 11548016], [11550388, 11550515], [11554385, 11554641], [11556077, 11556319], [11568149, 11568285], [11572380, 11572577], [11572686, 11573111], [11583073, 11583296], [11584039, 11584206], [11592882, 11593753], [11597184, 11597315], [11597637, 11597764], [11603047, 11603200], [11604438, 11604564], [11607519, 11607759], [11608341, 11608502], [11622650, 11622807], [11631134, 11631239], [11642196, 11642354], [11645491, 11645630], [11648113, 11648401], [11650872, 11651083], [11656149, 11656277], [11659884, 11659993], [11660861, 11661009], [11666756, 11666931], [11671769, 11671943], [11672438, 11672646], [11684325, 11684491], [11686962, 11687065], [11687616, 11687856], [11696819, 11696981], [11700913, 11701110], [11711048, 11711211], [11713562, 11713686], [11725236, 11725379], [11725754, 11725916], [11726117, 11726351], [11737954, 11738215], [11757319, 11757745], [11772450, 11772570], [11774914, 11775103], [11778265, 11778501], [11783394, 11783517], [11784525, 11784730], [11786902, 11787067], [11790141, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11833182, 11833410], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11873065]]	[[11501815, 11502232], [11511445, 11511642], [11513712, 11513871], [11514966, 11515097], [11520727, 11520939], [11522864, 11523098], [11532733, 11532901], [11535903, 11536020], [11539950, 11540101], [11543586, 11543701], [11547947, 11548016], [11550388, 11550515], [11554385, 11554641], [11556077, 11556319], [11568149, 11568285], [11572380, 11572577], [11572686, 11573111], [11583073, 11583296], [11584039, 11584206], [11592882, 11593753], [11597184, 11597315], [11597637, 11597764], [11603047, 11603200], [11604438, 11604564], [11607519, 11607759], [11608341, 11608502], [11622650, 11622807], [11631134, 11631239], [11642196, 11642354], [11645491, 11645630], [11648113, 11648401], [11650872, 11651083], [11656149, 11656277], [11659884, 11659993], [11660861, 11661009], [11666756, 11666931], [11671769, 11671943], [11672438, 11672646], [11684325, 11684491], [11686962, 11687065], [11687616, 11687856], [11696819, 11696981], [11700913, 11701110], [11711048, 11711211], [11713562, 11713686], [11725236, 11725379], [11725754, 11725916], [11726117, 11726351], [11737954, 11738215], [11757319, 11757745], [11772450, 11772570], [11774914, 11775103], [11778265, 11778501], [11783394, 11783517], [11784525, 11784730], [11786902, 11787067], [11790141, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11833182, 11833410], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11872844]]
NM_004662	[[11786218, 11786489], [11786902, 11787067], [11790141, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11833182, 11833410], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11873065]]	[[11790234, 11790282], [11795093, 11795264], [11797690, 11797813], [11806035, 11806229], [11808977, 11809126], [11827130, 11827258], [11833182, 11833410], [11835330, 11835522], [11837196, 11837388], [11840668, 11840839], [11845619, 11845802], [11865183, 11865573], [11872616, 11872844]]

Promoter

Chrom	Start	End	Description
chr17	11501773	11501806	CAGE_peak_1_at_DNAH9_5end
chr17	11501822	11501834	CAGE_peak_2_at_DNAH9_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I011943	11943658	11945389	0.49	[{'connected_gene': 'MAP2K4', 'score': 4.97}, {'connected_gene': 'GC17M011972', 'score': 0.31}, {'connected_gene': 'LOC101928350', 'score': 0.21}, {'connected_gene': 'DNAH9', 'score': 0.05}]
chr17	GH17I011644	11644404	11644553	0.66	[{'connected_gene': 'DNAH9', 'score': 0.25}, {'connected_gene': 'LOC101928350', 'score': 0.07}]
chr17	GH17I011704	11704937	11705760	0.68	[{'connected_gene': 'DNAH9', 'score': 0.14}, {'connected_gene': 'LOC101928350', 'score': 0.1}]
chr17	GH17I011598	11598103	11599368	1.68	[{'connected_gene': 'DNAH9', 'score': 550.77}, {'connected_gene': 'GC17P011447', 'score': 0.1}, {'connected_gene': 'LOC101928350', 'score': 0.06}]
chr17	GH17I011668	11668704	11669354	0.2	[{'connected_gene': 'DNAH9', 'score': 0.19}, {'connected_gene': 'LOC101928350', 'score': 0.08}]
chr17	GH17I011608	11608000	11609187	0.76	[{'connected_gene': 'DNAH9', 'score': 0.39}, {'connected_gene': 'LOC101928350', 'score': 0.06}]
chr17	GH17I011618	11618700	11619702	0.31	[{'connected_gene': 'DNAH9', 'score': 0.34}, {'connected_gene': 'LOC101928350', 'score': 0.07}]
chr17	GH17I011781	11781987	11782236	0.22	[{'connected_gene': 'DNAH9', 'score': 3.92}, {'connected_gene': 'LOC101928350', 'score': 0.15}]
chr17	GH17I011899	11899525	11900861	0.52	[{'connected_gene': 'LOC101928350', 'score': 0.37}, {'connected_gene': 'GC17M011972', 'score': 0.19}, {'connected_gene': 'DNAH9', 'score': 0.06}]
chr17	GH17I011908	11908396	11909653	0.98	[{'connected_gene': 'LOC101928350', 'score': 0.31}, {'connected_gene': 'GC17M011972', 'score': 0.21}, {'connected_gene': 'DNAH9', 'score': 0.06}]
chr17	GH17I011971	11971664	11971685	0.22	[{'connected_gene': 'GC17M011972', 'score': 550.77}, {'connected_gene': 'DNAH9', 'score': 2.61}, {'connected_gene': 'ENSG00000266368', 'score': 0.44}, {'connected_gene': 'LOC101928350', 'score': 0.16}]
chr17	GH17I011590	11590408	11590648	0.22	[{'connected_gene': 'PIR52820', 'score': 550.77}, {'connected_gene': 'DNAH9', 'score': 14.35}, {'connected_gene': 'GC17P011447', 'score': 0.11}]
chr17	GH17I011948	11948743	11949217	0.58	[{'connected_gene': 'GC17M011972', 'score': 0.34}, {'connected_gene': 'LOC101928350', 'score': 0.2}, {'connected_gene': 'DNAH9', 'score': 0.05}]