PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr10	5046042	5046058	CAGE_peak_1_at_AKR1C2_5end
chr10	5060113	5060122	CAGE_peak_4_at_AKR1C2_5end
chr10	5060148	5060171	CAGE_peak_2_at_AKR1C2_5end
chr10	5060184	5060198	CAGE_peak_3_at_AKR1C2_5end
chr10	5060201	5060211	CAGE_peak_5_at_AKR1C2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I004901	4901848	4903634	0.63	[{'connected_gene': 'AKR1C3', 'score': 5.17}, {'connected_gene': 'AKR1C2', 'score': 5.12}, {'connected_gene': 'AKR1C1', 'score': 4.68}, {'connected_gene': 'AKR1C6P', 'score': 0.39}, {'connected_gene': 'PIR32364', 'score': 0.25}]
chr10	GH10I005069	5069438	5073572	1.46	[{'connected_gene': 'AKR1C3', 'score': 17.55}, {'connected_gene': 'AKR1C2', 'score': 11.04}, {'connected_gene': 'AKR1C1', 'score': 5.38}, {'connected_gene': 'PIR40953', 'score': 0.39}, {'connected_gene': 'ENSG00000239142', 'score': 0.34}, {'connected_gene': 'GC10P005044', 'score': 0.31}]
chr10	GH10I005032	5032912	5034098	0.68	[{'connected_gene': 'AKR1C3', 'score': 566.6}, {'connected_gene': 'AKR1C2', 'score': 11.21}]
chr10	GH10I005025	5025473	5025833	0.78	[{'connected_gene': 'AKR1C3', 'score': 14.84}, {'connected_gene': 'AKR1C2', 'score': 0.44}]
chr10	GH10I005022	5022807	5022828	0.2	[{'connected_gene': 'AKR1C3', 'score': 15.32}, {'connected_gene': 'AKR1C2', 'score': 0.77}]
chr10	GH10I004807	4807187	4809649	0.79	[{'connected_gene': 'AKR1E2', 'score': 18.91}, {'connected_gene': 'AKR1C2', 'score': 5.57}, {'connected_gene': 'GC10P004844', 'score': 0.28}]
chr10	GH10I004825	4825549	4827596	1.92	[{'connected_gene': 'AKR1E2', 'score': 558.14}, {'connected_gene': 'UCN3', 'score': 10.29}, {'connected_gene': 'TUBAL3', 'score': 9.7}, {'connected_gene': 'AKR1C2', 'score': 8.64}, {'connected_gene': 'GC10P004844', 'score': 0.37}]
chr10	GH10I004847	4847121	4851089	1.46	[{'connected_gene': 'FAM208B', 'score': 11.85}, {'connected_gene': 'NRBF2P5', 'score': 11.37}, {'connected_gene': 'AKR1E2', 'score': 11.0}, {'connected_gene': 'ENSG00000226647', 'score': 9.95}, {'connected_gene': 'UCN3', 'score': 9.86}, {'connected_gene': 'AKR1C2', 'score': 5.31}, {'connected_gene': 'GC10P004844', 'score': 0.77}, {'connected_gene': 'PIR32364', 'score': 0.77}]
chr10	GH10I005018	5018529	5021400	1.24	[{'connected_gene': 'AKR1C2', 'score': 577.25}, {'connected_gene': 'AKR1C3', 'score': 14.48}, {'connected_gene': 'ENSG00000239142', 'score': 11.01}, {'connected_gene': 'UCN3', 'score': 10.4}, {'connected_gene': 'AKR1C1', 'score': 8.69}]
chr10	GH10I005021	5021917	5022193	0.43	[{'connected_gene': 'AKR1C2', 'score': 14.15}, {'connected_gene': 'ENSG00000239142', 'score': 11.01}, {'connected_gene': 'AKR1C3', 'score': 10.89}, {'connected_gene': 'UCN3', 'score': 10.4}]
chr10	GH10I004924	4924825	4924970	0.48	[{'connected_gene': 'AKR1C2', 'score': 18.13}, {'connected_gene': 'AKR1C1', 'score': 10.8}, {'connected_gene': 'UCN3', 'score': 9.72}, {'connected_gene': 'AKR1C6P', 'score': 0.44}, {'connected_gene': 'GC10P004937', 'score': 0.39}]
chr10	GH10I004956	4956337	4959578	0.69	[{'connected_gene': 'AKR1C2', 'score': 22.17}, {'connected_gene': 'AKR1C1', 'score': 11.48}, {'connected_gene': 'LOC101928051', 'score': 5.3}, {'connected_gene': 'ENSG00000238840', 'score': 0.77}, {'connected_gene': 'GC10P004937', 'score': 0.34}, {'connected_gene': 'GC10M004934', 'score': 0.29}]
chr10	GH10I004939	4939361	4944400	1.35	[{'connected_gene': 'AKR1C2', 'score': 19.88}, {'connected_gene': 'AKR1C1', 'score': 14.61}, {'connected_gene': 'GC10P004937', 'score': 0.77}, {'connected_gene': 'ENSG00000238840', 'score': 0.34}, {'connected_gene': 'GC10M004934', 'score': 0.25}]
chr10	GH10I004811	4811602	4814046	1.17	[{'connected_gene': 'AKR1C2', 'score': 6.28}, {'connected_gene': 'LOC101928051', 'score': 6.07}, {'connected_gene': 'AKR1E2', 'score': 5.98}, {'connected_gene': 'AKR1C1', 'score': 4.6}, {'connected_gene': 'GC10P004844', 'score': 0.29}]
chr10	GH10I004981	4981339	4987603	1.39	[{'connected_gene': 'AKR1C2', 'score': 12.46}, {'connected_gene': 'LOC101928051', 'score': 11.42}, {'connected_gene': 'AKR1C1', 'score': 10.9}, {'connected_gene': 'AKR1C3', 'score': 5.1}, {'connected_gene': 'GC10P004980', 'score': 0.77}, {'connected_gene': 'GC10P004986', 'score': 0.77}, {'connected_gene': 'GC10M004934', 'score': 0.44}]
chr10	GH10I005008	5008377	5009881	0.9	[{'connected_gene': 'AKR1C2', 'score': 12.6}, {'connected_gene': 'LOC101928051', 'score': 10.23}, {'connected_gene': 'ENSG00000239148', 'score': 0.77}]
chr10	GH10I004962	4962365	4965288	1.57	[{'connected_gene': 'AKR1C1', 'score': 560.05}, {'connected_gene': 'ENSG00000238840', 'score': 550.77}, {'connected_gene': 'AKR1C2', 'score': 15.57}, {'connected_gene': 'GDI2', 'score': 14.08}, {'connected_gene': 'LOC105376384', 'score': 11.63}, {'connected_gene': 'LOC101928051', 'score': 5.4}, {'connected_gene': 'GC10P004980', 'score': 0.37}, {'connected_gene': 'GC10M004934', 'score': 0.31}]
chr10	GH10I004963	4962009	4962158	0.31	[{'connected_gene': 'AKR1C1', 'score': 559.55}, {'connected_gene': 'ENSG00000238840', 'score': 550.77}, {'connected_gene': 'AKR1C2', 'score': 19.38}, {'connected_gene': 'GC10P004937', 'score': 0.34}, {'connected_gene': 'GC10M004934', 'score': 0.31}]
chr10	GH10I004803	4803576	4805481	0.43	[{'connected_gene': 'UCN3', 'score': 9.84}, {'connected_gene': 'AKR1C2', 'score': 6.09}, {'connected_gene': 'LOC101928051', 'score': 5.4}, {'connected_gene': 'AKR1E2', 'score': 0.37}, {'connected_gene': 'GC10P004844', 'score': 0.26}]
chr10	GH10I004762	4762151	4773797	1.43	[{'connected_gene': 'LOC105376375', 'score': 550.77}, {'connected_gene': 'AKR1C2', 'score': 4.65}, {'connected_gene': 'LOC105376374', 'score': 0.77}, {'connected_gene': 'AKR1E2', 'score': 0.37}]
chr10	GH10I005013	5013549	5013638	0.43	[{'connected_gene': 'LOC101928051', 'score': 7.02}, {'connected_gene': 'AKR1C2', 'score': 0.77}, {'connected_gene': 'ENSG00000239148', 'score': 0.44}]
chr10	GH10I005003	5003400	5004201	1.12	[{'connected_gene': 'ENSG00000239148', 'score': 550.77}, {'connected_gene': 'AKR1C2', 'score': 19.36}, {'connected_gene': 'LOC101928051', 'score': 8.05}]
chr10	GH10I005002	5002829	5003222	0.43	[{'connected_gene': 'ENSG00000239148', 'score': 550.77}, {'connected_gene': 'AKR1C2', 'score': 6.09}, {'connected_gene': 'LOC101928051', 'score': 0.44}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000380753	[[5029966, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5041391, 5041469], [5042741, 5042858], [5043705, 5043873], [5045943, 5046215]]	[[5032187, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5041391, 5041469], [5042741, 5042858], [5043705, 5043873], [5045943, 5046027]]
ENST00000421196	[[5031625, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5042741, 5042858], [5043705, 5043873], [5045943, 5046052]]	[[5032187, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5042741, 5042858], [5043705, 5043873], [5045943, 5046027]]
ENST00000407674	[[5031965, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5041391, 5041469], [5042741, 5042858], [5043705, 5043873], [5045943, 5046206], [5049598, 5049698], [5060091, 5060207]]	[[5032187, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5041391, 5041469], [5042741, 5042858], [5043705, 5043873], [5045943, 5046027]]
ENST00000460124	[[5031980, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5041391, 5042858], [5043705, 5043873], [5045943, 5046215]]	None
ENST00000604507	[[5038025, 5038057], [5040816, 5040939], [5041391, 5041469], [5042741, 5042858], [5043705, 5043873], [5045943, 5046114], [5060091, 5060147]]	[[5038025, 5038057], [5040816, 5040939], [5041391, 5041469], [5042741, 5042858], [5043705, 5043873], [5045943, 5046027]]
ENST00000455190	[[5042102, 5042652], [5042741, 5042858], [5043705, 5043873], [5045943, 5046053]]	[[5042601, 5042652], [5042741, 5042858], [5043705, 5043873], [5045943, 5046027]]
ENST00000604184	[[5042494, 5042652], [5042741, 5042858], [5043705, 5043873], [5045943, 5046053]]	None
ENST00000604428	[[5048186, 5048244], [5049598, 5049698], [5052535, 5052845], [5060091, 5060223]]	None
ENST00000604711	[[5048653, 5048784], [5049598, 5049698], [5052535, 5052845], [5060091, 5060126]]	None
ENST00000603073	[[5052654, 5052845], [5057094, 5057426], [5058028, 5058084]]	None
ENST00000604439	[[5055498, 5055812], [5057094, 5057240]]	None
NM_001321027	[[5029966, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5042741, 5042858], [5043705, 5043873], [5045943, 5046206]]	[[5032187, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5042741, 5042858], [5043705, 5043873], [5045943, 5046027]]
NM_001354	[[5029966, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5041391, 5041469], [5042741, 5042858], [5043705, 5043873], [5045943, 5046206], [5049598, 5049698], [5060091, 5060225]]	[[5032187, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5041391, 5041469], [5042741, 5042858], [5043705, 5043873], [5045943, 5046027]]
NM_205845	[[5029966, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5041391, 5041469], [5042741, 5042858], [5043705, 5043873], [5045943, 5046206], [5060091, 5060225]]	[[5032187, 5032230], [5034022, 5034105], [5037510, 5037676], [5037947, 5038057], [5040816, 5040939], [5041391, 5041469], [5042741, 5042858], [5043705, 5043873], [5045943, 5046027]]
NM_001135241	[[5042102, 5042652], [5042741, 5042858], [5043705, 5043873], [5045943, 5046206]]	[[5042601, 5042652], [5042741, 5042858], [5043705, 5043873], [5045943, 5046027]]