PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000509617	[[71858254, 71858308], [71858570, 71858795], [71859448, 71859597]]	[[71859552, 71859597]]
ENST00000286648	[[71859155, 71859643], [71863783, 71863899], [71888083, 71888277], [71889275, 71889423], [71891532, 71891648], [71892381, 71892472], [71895068, 71896631]]	[[71859552, 71859643], [71863783, 71863899], [71888083, 71888277], [71889275, 71889423], [71891532, 71891648], [71892381, 71892472], [71895068, 71895095]]
ENST00000503359	[[71859279, 71859734], [71863783, 71863899], [71888083, 71888277], [71889275, 71889423], [71891532, 71891648], [71892381, 71892472], [71895068, 71896631]]	[[71859552, 71859699]]
ENST00000504952	[[71859354, 71859643], [71863783, 71863899], [71888083, 71888277], [71889275, 71889423], [71891532, 71891648], [71892381, 71892472], [71894339, 71894436], [71895068, 71896631]]	[[71859552, 71859643], [71863783, 71863899], [71888083, 71888277], [71889275, 71889423], [71891532, 71891648], [71892381, 71892472], [71894339, 71894436], [71895068, 71895169]]
ENST00000504730	[[71859354, 71859643], [71863783, 71863899], [71888083, 71888277], [71889275, 71889423], [71892381, 71892472], [71895068, 71896631]]	[[71859552, 71859643], [71863783, 71863899], [71888083, 71888277], [71889275, 71889423], [71892381, 71892432]]
ENST00000509764	[[71891600, 71891648], [71892381, 71892516]]	None
NM_000788	[[71859264, 71859643], [71863783, 71863899], [71888083, 71888277], [71889275, 71889423], [71891532, 71891648], [71892381, 71892472], [71895068, 71896631]]	[[71859552, 71859643], [71863783, 71863899], [71888083, 71888277], [71889275, 71889423], [71891532, 71891648], [71892381, 71892472], [71895068, 71895095]]

Promoter

Chrom	Start	End	Description
chr4	71859258	71859372	CAGE_peak_1_at_DCK_5end
chr4	71859385	71859407	CAGE_peak_2_at_DCK_5end
chr4	71859413	71859473	CAGE_peak_3_at_DCK_5end
chr4	71859476	71859496	CAGE_peak_5_at_DCK_5end
chr4	71859502	71859522	CAGE_peak_4_at_DCK_5end
chr4	71859526	71859547	CAGE_peak_6_at_DCK_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I070947	70947201	70947800	0.2	[{'connected_gene': 'MOB1B', 'score': 12.2}, {'connected_gene': 'UTP3', 'score': 10.05}, {'connected_gene': 'JCHAIN', 'score': 10.04}, {'connected_gene': 'DCK', 'score': 4.36}]
chr4	GH04I070948	70948801	70949000	0.31	[{'connected_gene': 'MOB1B', 'score': 12.2}, {'connected_gene': 'UTP3', 'score': 10.05}, {'connected_gene': 'JCHAIN', 'score': 10.04}, {'connected_gene': 'DCK', 'score': 0.26}]
chr4	GH04I070938	70938257	70938316	0.76	[{'connected_gene': 'MOB1B', 'score': 550.28}, {'connected_gene': 'GRSF1', 'score': 11.12}, {'connected_gene': 'JCHAIN', 'score': 10.22}, {'connected_gene': 'DCK', 'score': 0.23}]
chr4	GH04I070901	70901526	70904540	2.36	[{'connected_gene': 'MOB1B', 'score': 567.62}, {'connected_gene': 'DCK', 'score': 11.9}, {'connected_gene': 'GRSF1', 'score': 11.85}, {'connected_gene': 'UTP3', 'score': 10.35}, {'connected_gene': 'JCHAIN', 'score': 10.35}]
chr4	GH04I070923	70923964	70924401	0.86	[{'connected_gene': 'MOB1B', 'score': 12.7}, {'connected_gene': 'DCK', 'score': 0.2}]
chr4	GH04I070946	70946401	70947000	0.2	[{'connected_gene': 'MOB1B', 'score': 0.26}, {'connected_gene': 'DCK', 'score': 0.25}]
chr4	GH04I070926	70926002	70926453	0.79	[{'connected_gene': 'MOB1B', 'score': 12.7}, {'connected_gene': 'DCK', 'score': 0.2}]
chr4	GH04I071107	71107202	71108759	0.2	[{'connected_gene': 'SLC4A4', 'score': 5.97}, {'connected_gene': 'DCK', 'score': 5.04}, {'connected_gene': 'GC04M071034', 'score': 0.23}]
chr4	GH04I071126	71126341	71127583	0.57	[{'connected_gene': 'SLC4A4', 'score': 8.76}, {'connected_gene': 'DCK', 'score': 4.19}, {'connected_gene': 'GC04M071034', 'score': 0.29}]
chr4	GH04I070973	70973108	70974085	0.31	[{'connected_gene': 'RUFY3', 'score': 12.16}, {'connected_gene': 'MOB1B', 'score': 5.7}, {'connected_gene': 'DCK', 'score': 0.37}]
chr4	GH04I070914	70914084	70916233	0.65	[{'connected_gene': 'RUFY3', 'score': 4.83}, {'connected_gene': 'MOB1B', 'score': 0.39}, {'connected_gene': 'DCK', 'score': 0.18}]
chr4	GH04I070953	70953801	70954800	0.46	[{'connected_gene': 'RUFY3', 'score': 12.18}, {'connected_gene': 'DCK', 'score': 7.36}, {'connected_gene': 'MOB1B', 'score': 0.23}]
chr4	GH04I071130	71130322	71132072	0.95	[{'connected_gene': 'RUFY3', 'score': 4.34}, {'connected_gene': 'GC04M071034', 'score': 0.31}, {'connected_gene': 'DCK', 'score': 0.12}]
chr4	GH04I071137	71137205	71138898	0.2	[{'connected_gene': 'RUFY3', 'score': 4.26}, {'connected_gene': 'DCK', 'score': 4.12}, {'connected_gene': 'GC04M071034', 'score': 0.34}]
chr4	GH04I070927	70927023	70928233	0.79	[{'connected_gene': 'UTP3', 'score': 10.59}, {'connected_gene': 'JCHAIN', 'score': 10.59}, {'connected_gene': 'MOB1B', 'score': 6.33}, {'connected_gene': 'DCK', 'score': 0.21}]
chr4	GH04I071008	71008317	71009075	0.2	[{'connected_gene': 'UTP3', 'score': 11.0}, {'connected_gene': 'JCHAIN', 'score': 11.0}, {'connected_gene': 'DCK', 'score': 5.05}, {'connected_gene': 'MOB1B', 'score': 0.14}, {'connected_gene': 'GC04M071034', 'score': 0.1}]
chr4	GH04I071003	71003259	71007942	0.88	[{'connected_gene': 'UTP3', 'score': 11.0}, {'connected_gene': 'JCHAIN', 'score': 11.0}, {'connected_gene': 'DCK', 'score': 4.57}, {'connected_gene': 'RUFY3', 'score': 4.48}, {'connected_gene': 'MOB1B', 'score': 0.15}, {'connected_gene': 'GC04M071034', 'score': 0.1}]
chr4	GH04I071025	71025565	71026879	0.66	[{'connected_gene': 'UTP3', 'score': 10.23}, {'connected_gene': 'JCHAIN', 'score': 10.22}, {'connected_gene': 'DCK', 'score': 4.98}, {'connected_gene': 'GC04M071034', 'score': 0.12}]
chr4	GH04I070957	70957887	70959530	0.2	[{'connected_gene': 'JCHAIN', 'score': 10.18}, {'connected_gene': 'UTP3', 'score': 10.18}, {'connected_gene': 'DCK', 'score': 6.2}, {'connected_gene': 'RUFY3', 'score': 5.72}, {'connected_gene': 'MOB1B', 'score': 0.22}]
chr4	GH04I070759	70759134	70759800	0.49	[{'connected_gene': 'JCHAIN', 'score': 10.75}, {'connected_gene': 'UTP3', 'score': 10.55}, {'connected_gene': 'DCK', 'score': 5.61}, {'connected_gene': 'PIR34937', 'score': 0.77}, {'connected_gene': 'ENSG00000272986', 'score': 0.23}, {'connected_gene': 'RUFY3', 'score': 0.22}]
chr4	GH04I071067	71067484	71067613	0.8	[{'connected_gene': 'JCHAIN', 'score': 10.12}, {'connected_gene': 'UTP3', 'score': 9.63}, {'connected_gene': 'DCK', 'score': 0.18}, {'connected_gene': 'GC04M071034', 'score': 0.16}]
chr4	GH04I070754	70754119	70755631	0.86	[{'connected_gene': 'JCHAIN', 'score': 11.19}, {'connected_gene': 'DCK', 'score': 5.91}, {'connected_gene': 'PIR34937', 'score': 0.44}, {'connected_gene': 'RUFY3', 'score': 0.23}, {'connected_gene': 'ENSG00000272986', 'score': 0.23}]
chr4	GH04I070836	70836827	70840640	2.01	[{'connected_gene': 'GRSF1', 'score': 550.77}, {'connected_gene': 'GC04P070840', 'score': 550.77}, {'connected_gene': 'UTP3', 'score': 10.1}, {'connected_gene': 'JCHAIN', 'score': 10.1}, {'connected_gene': 'RUFY3', 'score': 8.35}, {'connected_gene': 'DCK', 'score': 5.96}, {'connected_gene': 'PIR34937', 'score': 0.18}]
chr4	GH04I070944	70944601	70944800	0.2	[{'connected_gene': 'DCK', 'score': 7.85}, {'connected_gene': 'MOB1B', 'score': 0.26}]
chr4	GH04I070979	70979764	70979913	0.46	[{'connected_gene': 'DCK', 'score': 0.39}, {'connected_gene': 'MOB1B', 'score': 0.18}]
chr4	GH04I070974	70974205	70974878	0.2	[{'connected_gene': 'DCK', 'score': 0.37}, {'connected_gene': 'MOB1B', 'score': 0.19}]
chr4	GH04I070942	70942801	70943200	0.46	[{'connected_gene': 'DCK', 'score': 7.85}, {'connected_gene': 'MOB1B', 'score': 0.26}]
chr4	GH04I071009	71009165	71010753	0.84	[{'connected_gene': 'DCK', 'score': 5.16}, {'connected_gene': 'MOB1B', 'score': 0.14}, {'connected_gene': 'GC04M071034', 'score': 0.11}]
chr4	GH04I070992	70992159	70998319	2.53	[{'connected_gene': 'DCK', 'score': 559.06}, {'connected_gene': 'RUFY3', 'score': 5.16}, {'connected_gene': 'MOB1B', 'score': 4.77}, {'connected_gene': 'JCHAIN', 'score': 3.75}, {'connected_gene': 'GC04M071034', 'score': 0.1}]
chr4	GH04I070969	70969833	70972006	0.8	[{'connected_gene': 'DCK', 'score': 19.44}, {'connected_gene': 'RUFY3', 'score': 12.17}, {'connected_gene': 'GRSF1', 'score': 11.48}, {'connected_gene': 'JCHAIN', 'score': 10.93}, {'connected_gene': 'UTP3', 'score': 10.93}, {'connected_gene': 'MOB1B', 'score': 0.2}]
chr4	GH04I070773	70773401	70773600	0.31	[{'connected_gene': 'DCK', 'score': 6.29}, {'connected_gene': 'PIR34937', 'score': 0.39}, {'connected_gene': 'RUFY3', 'score': 0.2}, {'connected_gene': 'GC04P070840', 'score': 0.2}]
chr4	GH04I070778	70778826	70779978	0.92	[{'connected_gene': 'DCK', 'score': 6.28}, {'connected_gene': 'PIR34937', 'score': 0.37}, {'connected_gene': 'GC04P070840', 'score': 0.21}, {'connected_gene': 'RUFY3', 'score': 0.18}]
chr4	GH04I070894	70894256	70897328	0.74	[{'connected_gene': 'DCK', 'score': 7.53}, {'connected_gene': 'GC04P070898', 'score': 0.77}, {'connected_gene': 'GC04P070862', 'score': 0.29}]
chr4	GH04I070891	70891944	70892762	0.83	[{'connected_gene': 'DCK', 'score': 4.18}, {'connected_gene': 'GC04P070898', 'score': 0.44}, {'connected_gene': 'GC04P070862', 'score': 0.29}]
chr4	GH04I071032	71032224	71032373	0.31	[{'connected_gene': 'DCK', 'score': 0.28}, {'connected_gene': 'GC04M071034', 'score': 0.13}]
chr4	GH04I070678	70677953	70679133	1.14	[{'connected_gene': 'LOC101927297', 'score': 550.77}, {'connected_gene': 'ENAM', 'score': 10.8}, {'connected_gene': 'JCHAIN', 'score': 6.86}, {'connected_gene': 'DCK', 'score': 2.9}]