PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000524532	[[67656109, 67656286], [67656414, 67656471], [67663987, 67664074], [67664852, 67665037], [67669810, 67669847]]	[[67664878, 67665037], [67669810, 67669847]]
ENST00000311864	[[67656145, 67656286], [67663987, 67664074], [67664852, 67665037], [67669810, 67670010], [67671253, 67671806], [67674918, 67675166], [67688495, 67688524], [67691834, 67691982], [67695104, 67695267]]	[[67664878, 67665037], [67669810, 67670010], [67671253, 67671806], [67674918, 67675166], [67688495, 67688524], [67691834, 67691914]]
ENST00000530728	[[67656156, 67656286], [67663670, 67663746], [67663987, 67664074], [67664852, 67665037], [67669810, 67669884]]	[[67664878, 67665037], [67669810, 67669884]]
ENST00000524914	[[67656159, 67656286], [67663987, 67664074], [67664852, 67665037], [67665691, 67665847], [67666243, 67667277]]	[[67664878, 67665037], [67665691, 67665703]]
ENST00000534174	[[67656177, 67656286], [67663987, 67664074], [67664852, 67665037], [67669810, 67670010], [67671253, 67671806], [67674918, 67674967], [67675033, 67675166], [67688495, 67688524], [67691834, 67691982], [67695104, 67695262]]	[[67664878, 67665037], [67669810, 67670010], [67671253, 67671806], [67674918, 67674967], [67675033, 67675166], [67688495, 67688524], [67691834, 67691914]]
ENST00000556046	[[67663490, 67663601], [67663987, 67664074], [67664852, 67665037], [67668147, 67668464], [67669810, 67670010], [67671253, 67671806], [67674918, 67675166], [67688495, 67688742], [67690469, 67690657]]	[[67664878, 67665037], [67668147, 67668249]]
ENST00000531566	[[67664005, 67664074], [67664852, 67665037], [67669884, 67670004]]	None
ENST00000556117	[[67671664, 67671806], [67688495, 67688524], [67690469, 67690657]]	[[67671664, 67671806], [67688495, 67688510]]
ENST00000557671	[[67675033, 67675166], [67688495, 67688524], [67691357, 67691545]]	[[67675033, 67675166], [67688495, 67688524], [67691357, 67691410]]
ENST00000554500	[[67694187, 67694451], [67695104, 67695261]]	None
NM_173526	[[67656109, 67656286], [67663987, 67664074], [67664852, 67665037], [67669810, 67670010], [67671253, 67671806], [67674918, 67675166], [67688495, 67688524], [67691834, 67691982], [67695104, 67695267]]	[[67664878, 67665037], [67669810, 67670010], [67671253, 67671806], [67674918, 67675166], [67688495, 67688524], [67691834, 67691914]]

Promoter

Chrom	Start	End	Description
chr14	67656044	67656058	CAGE_peak_2_at_FAM71D_5end
chr14	67656142	67656162	CAGE_peak_1_at_FAM71D_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I067226	67226447	67227368	0.2	[{'connected_gene': 'ATP6V1D', 'score': 24.03}, {'connected_gene': 'MPP5', 'score': 0.39}, {'connected_gene': 'ENSG00000258988', 'score': 0.31}, {'connected_gene': 'FAM71D', 'score': 0.28}]
chr14	GH14I067221	67221156	67222864	0.8	[{'connected_gene': 'ATP6V1D', 'score': 25.04}, {'connected_gene': 'MPP5', 'score': 0.37}, {'connected_gene': 'ENSG00000258988', 'score': 0.34}, {'connected_gene': 'FAM71D', 'score': 0.29}]
chr14	GH14I067216	67216844	67219486	0.63	[{'connected_gene': 'ATP6V1D', 'score': 23.66}, {'connected_gene': 'MPP5', 'score': 12.18}, {'connected_gene': 'GPHN', 'score': 5.94}, {'connected_gene': 'ENSG00000258988', 'score': 0.37}, {'connected_gene': 'FAM71D', 'score': 0.31}]
chr14	GH14I067228	67228331	67229627	0.31	[{'connected_gene': 'ATP6V1D', 'score': 24.25}, {'connected_gene': 'EIF2S1', 'score': 7.85}, {'connected_gene': 'MPP5', 'score': 0.39}, {'connected_gene': 'ENSG00000258988', 'score': 0.31}, {'connected_gene': 'FAM71D', 'score': 0.28}]
chr14	GH14I067312	67312004	67312153	0.8	[{'connected_gene': 'ATP6V1D', 'score': 37.24}, {'connected_gene': 'EIF2S1', 'score': 12.33}, {'connected_gene': 'FAM71D', 'score': 11.37}, {'connected_gene': 'GC14P067341', 'score': 0.31}, {'connected_gene': 'GC14M067260', 'score': 0.23}, {'connected_gene': 'GC14M067261', 'score': 0.23}, {'connected_gene': 'MPP5', 'score': 0.19}]
chr14	GH14I067199	67199001	67199400	0.5	[{'connected_gene': 'SF3B4P1', 'score': 550.77}, {'connected_gene': 'ENSG00000258988', 'score': 550.77}, {'connected_gene': 'FAM71D', 'score': 0.44}, {'connected_gene': 'MPP5', 'score': 0.26}]
chr14	GH14I067189	67189391	67189450	0.84	[{'connected_gene': 'LOC105370538', 'score': 550.77}, {'connected_gene': 'FAM71D', 'score': 550.77}, {'connected_gene': 'SF3B4P1', 'score': 0.44}]