PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_080759	[[72012097, 72014824], [72049272, 72049341], [72049837, 72049981], [72053300, 72053448], [72063128, 72063280], [72131155, 72131290], [72133951, 72134087], [72146971, 72147144], [72204687, 72204849], [72255926, 72256042], [72440053, 72441330]]	[[72014786, 72014824], [72049272, 72049341], [72049837, 72049981], [72053300, 72053448], [72063128, 72063280], [72131155, 72131290], [72133951, 72134087], [72146971, 72147144], [72204687, 72204849], [72255926, 72256042], [72440053, 72440907]]
NM_080760	[[72012097, 72014824], [72049272, 72049341], [72049837, 72049981], [72053300, 72053448], [72063128, 72063280], [72204687, 72204849], [72255926, 72256042], [72440053, 72441330]]	[[72014786, 72014824], [72049272, 72049341], [72049837, 72049981], [72053300, 72053448], [72063128, 72063280], [72204687, 72204849], [72255926, 72256042], [72440053, 72440907]]
NM_004392	[[72012097, 72014824], [72049272, 72049341], [72049837, 72049981], [72053300, 72053448], [72063128, 72063280], [72255926, 72256042], [72440053, 72441330]]	[[72014786, 72014824], [72049272, 72049341], [72049837, 72049981], [72053300, 72053448], [72063128, 72063280], [72255926, 72256042], [72440053, 72440907]]

Promoter

Chrom	Start	End	Description
chr13	72440346	72440352	CAGE_peak_21_at_DACH1_5end
chr13	72440434	72440479	CAGE_peak_6_at_DACH1_5end
chr13	72440493	72440513	CAGE_peak_12_at_DACH1_5end
chr13	72440540	72440579	CAGE_peak_9_at_DACH1_5end
chr13	72440583	72440605	CAGE_peak_10_at_DACH1_5end
chr13	72440693	72440706	CAGE_peak_15_at_DACH1_5end
chr13	72440726	72440736	CAGE_peak_19_at_DACH1_5end
chr13	72440745	72440757	CAGE_peak_18_at_DACH1_5end
chr13	72440765	72440769	CAGE_peak_25_at_DACH1_5end
chr13	72440772	72440847	CAGE_peak_5_at_DACH1_5end
chr13	72440880	72440895	CAGE_peak_7_at_DACH1_5end
chr13	72440901	72440968	CAGE_peak_4_at_DACH1_5end
chr13	72441047	72441060	CAGE_peak_11_at_DACH1_5end
chr13	72441074	72441172	CAGE_peak_2_at_DACH1_5end
chr13	72441259	72441268	CAGE_peak_8_at_DACH1_5end
chr13	72441289	72441300	CAGE_peak_13_at_DACH1_5end
chr13	72441315	72441454	CAGE_peak_1_at_DACH1_5end
chr13	72441493	72441502	CAGE_peak_20_at_DACH1_5end
chr13	72441506	72441562	CAGE_peak_3_at_DACH1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I072319	72319590	72319770	0.22	[{'connected_gene': 'DACH1', 'score': 3.0}, {'connected_gene': 'PIBF1', 'score': 1.42}, {'connected_gene': 'GC13P072290', 'score': 0.31}, {'connected_gene': 'GC13P072432', 'score': 0.14}]
chr13	GH13I071827	71827801	71829033	0.74	[{'connected_gene': 'DACH1', 'score': 11.8}, {'connected_gene': 'RPL35AP31', 'score': 0.37}, {'connected_gene': 'GC13P071789', 'score': 0.28}]
chr13	GH13I071814	71814999	71815236	0.51	[{'connected_gene': 'DACH1', 'score': 12.32}, {'connected_gene': 'GC13P071789', 'score': 0.31}, {'connected_gene': 'RPL35AP31', 'score': 0.29}]
chr13	GH13I071879	71879001	71879512	0.96	[{'connected_gene': 'DACH1', 'score': 0.39}, {'connected_gene': 'RPS10P21', 'score': 0.29}]
chr13	GH13I071872	71872254	71875369	0.71	[{'connected_gene': 'DACH1', 'score': 0.77}, {'connected_gene': 'RPS10P21', 'score': 0.26}]
chr13	GH13I071871	71871410	71871611	0.77	[{'connected_gene': 'DACH1', 'score': 0.77}, {'connected_gene': 'RPS10P21', 'score': 0.26}]
chr13	GH13I071876	71876842	71877640	0.56	[{'connected_gene': 'DACH1', 'score': 0.44}, {'connected_gene': 'RPS10P21', 'score': 0.28}]
chr13	GH13I071860	71860478	71868114	2.46	[{'connected_gene': 'DACH1', 'score': 578.33}, {'connected_gene': 'GC13M071866', 'score': 550.77}, {'connected_gene': 'GC13M071865', 'score': 550.77}, {'connected_gene': 'GC13P071867', 'score': 0.77}, {'connected_gene': 'GC13M071857', 'score': 0.77}]
chr13	GH13I071632	71632207	71632438	0.26	[{'connected_gene': 'DACH1', 'score': 2.34}, {'connected_gene': 'GC13P071626', 'score': 0.44}, {'connected_gene': 'GC13P071643', 'score': 0.39}]
chr13	GH13I072125	72125412	72127529	0.59	[{'connected_gene': 'DACH1', 'score': 2.52}, {'connected_gene': 'GC13P072120', 'score': 0.44}, {'connected_gene': 'GC13M072184', 'score': 0.21}]
chr13	GH13I071775	71775134	71775161	0.4	[{'connected_gene': 'DACH1', 'score': 2.28}, {'connected_gene': 'GC13P071789', 'score': 0.39}, {'connected_gene': 'GC13M071714', 'score': 0.21}, {'connected_gene': 'GC13M071713', 'score': 0.21}]
chr13	GH13I071541	71541910	71541950	0.22	[{'connected_gene': 'DACH1', 'score': 6.53}, {'connected_gene': 'GC13P071515', 'score': 0.31}, {'connected_gene': 'GC13P071626', 'score': 0.18}]
chr13	GH13I071527	71527992	71528302	0.42	[{'connected_gene': 'DACH1', 'score': 4.04}, {'connected_gene': 'GC13P071515', 'score': 0.39}, {'connected_gene': 'GC13P071626', 'score': 0.15}]
chr13	GH13I071681	71681704	71682907	0.71	[{'connected_gene': 'H3F3BP1', 'score': 0.44}, {'connected_gene': 'RPL21P109', 'score': 0.34}, {'connected_gene': 'DACH1', 'score': 0.09}]
chr13	GH13I071831	71831929	71832078	0.7	[{'connected_gene': 'RPL35AP31', 'score': 0.39}, {'connected_gene': 'DACH1', 'score': 0.28}, {'connected_gene': 'GC13P071789', 'score': 0.26}]
chr13	GH13I071845	71845646	71845938	0.25	[{'connected_gene': 'RPL35AP31', 'score': 550.77}, {'connected_gene': 'GC13P071846', 'score': 550.77}, {'connected_gene': 'DACH1', 'score': 6.82}, {'connected_gene': 'GC13P071789', 'score': 0.22}]
chr13	GH13I071515	71515617	71515841	1.12	[{'connected_gene': 'GC13P071515', 'score': 550.77}, {'connected_gene': 'GC13P071626', 'score': 0.14}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071621	71621048	71622105	1.03	[{'connected_gene': 'GC13P071626', 'score': 0.44}, {'connected_gene': 'GC13P071515', 'score': 0.14}, {'connected_gene': 'DACH1', 'score': 0.07}]
chr13	GH13I071753	71753196	71753408	0.4	[{'connected_gene': 'GC13M071714', 'score': 0.28}, {'connected_gene': 'GC13P071789', 'score': 0.28}, {'connected_gene': 'GC13M071713', 'score': 0.28}, {'connected_gene': 'DACH1', 'score': 0.13}]
chr13	GH13I071587	71587062	71587373	0.66	[{'connected_gene': 'GC13P071626', 'score': 0.28}, {'connected_gene': 'GC13P071515', 'score': 0.19}, {'connected_gene': 'DACH1', 'score': 0.06}]
chr13	GH13I071751	71751052	71751394	0.69	[{'connected_gene': 'GC13M071714', 'score': 0.28}, {'connected_gene': 'GC13P071789', 'score': 0.28}, {'connected_gene': 'GC13M071713', 'score': 0.28}, {'connected_gene': 'DACH1', 'score': 0.13}]
chr13	GH13I071540	71540193	71540521	0.63	[{'connected_gene': 'GC13P071515', 'score': 0.34}, {'connected_gene': 'GC13P071626', 'score': 0.17}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071851	71851655	71854203	1.11	[{'connected_gene': 'GC13M071857', 'score': 0.44}, {'connected_gene': 'GC13P071846', 'score': 0.44}, {'connected_gene': 'DACH1', 'score': 0.37}]
chr13	GH13I071602	71602407	71602624	0.51	[{'connected_gene': 'GC13P071626', 'score': 0.34}, {'connected_gene': 'GC13P071515', 'score': 0.17}, {'connected_gene': 'DACH1', 'score': 0.06}]
chr13	GH13I071786	71786900	71787267	0.6	[{'connected_gene': 'GC13P071789', 'score': 0.77}, {'connected_gene': 'GC13M071714', 'score': 0.19}, {'connected_gene': 'GC13M071713', 'score': 0.19}, {'connected_gene': 'DACH1', 'score': 0.18}]
chr13	GH13I071522	71522904	71523505	0.71	[{'connected_gene': 'GC13P071515', 'score': 0.44}, {'connected_gene': 'GC13P071626', 'score': 0.15}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071546	71546790	71547490	0.51	[{'connected_gene': 'GC13P071515', 'score': 0.29}, {'connected_gene': 'GC13P071626', 'score': 0.18}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071624	71624064	71626995	0.94	[{'connected_gene': 'GC13P071626', 'score': 550.77}, {'connected_gene': 'GC13P071515', 'score': 0.14}, {'connected_gene': 'DACH1', 'score': 0.07}]
chr13	GH13I071642	71642989	71644036	1.07	[{'connected_gene': 'GC13P071643', 'score': 550.77}, {'connected_gene': 'GC13P071626', 'score': 0.37}, {'connected_gene': 'DACH1', 'score': 0.07}]
chr13	GH13I071524	71524686	71525342	0.91	[{'connected_gene': 'GC13P071515', 'score': 0.44}, {'connected_gene': 'GC13P071626', 'score': 0.15}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071771	71771848	71774098	1.18	[{'connected_gene': 'GC13P071789', 'score': 0.37}, {'connected_gene': 'GC13M071714', 'score': 0.22}, {'connected_gene': 'GC13M071713', 'score': 0.22}, {'connected_gene': 'DACH1', 'score': 0.15}]
chr13	GH13I071613	71613001	71613800	0.2	[{'connected_gene': 'GC13P071626', 'score': 0.39}, {'connected_gene': 'GC13P071515', 'score': 0.15}, {'connected_gene': 'DACH1', 'score': 0.07}]
chr13	GH13I071726	71726717	71728802	0.98	[{'connected_gene': 'GC13M071714', 'score': 0.39}, {'connected_gene': 'GC13M071713', 'score': 0.39}, {'connected_gene': 'GC13P071789', 'score': 0.21}, {'connected_gene': 'DACH1', 'score': 0.11}]
chr13	GH13I071767	71767645	71767853	0.4	[{'connected_gene': 'GC13P071789', 'score': 0.34}, {'connected_gene': 'GC13M071714', 'score': 0.23}, {'connected_gene': 'GC13M071713', 'score': 0.23}, {'connected_gene': 'DACH1', 'score': 0.15}]
chr13	GH13I071638	71638273	71638570	0.4	[{'connected_gene': 'GC13P071643', 'score': 0.44}, {'connected_gene': 'GC13P071626', 'score': 0.39}, {'connected_gene': 'DACH1', 'score': 0.07}]
chr13	GH13I071588	71587643	71587872	0.51	[{'connected_gene': 'GC13P071626', 'score': 0.28}, {'connected_gene': 'GC13P071515', 'score': 0.19}, {'connected_gene': 'DACH1', 'score': 0.06}]
chr13	GH13I071758	71758901	71760856	1.37	[{'connected_gene': 'GC13P071789', 'score': 0.29}, {'connected_gene': 'GC13M071714', 'score': 0.25}, {'connected_gene': 'GC13M071713', 'score': 0.25}, {'connected_gene': 'DACH1', 'score': 0.14}]
chr13	GH13I071516	71516610	71516871	0.6	[{'connected_gene': 'GC13P071515', 'score': 550.77}, {'connected_gene': 'GC13P071626', 'score': 0.14}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071611	71611001	71611400	0.68	[{'connected_gene': 'GC13P071626', 'score': 0.37}, {'connected_gene': 'GC13P071515', 'score': 0.15}, {'connected_gene': 'DACH1', 'score': 0.07}]
chr13	GH13I071712	71712663	71713641	0.56	[{'connected_gene': 'GC13M071714', 'score': 550.77}, {'connected_gene': 'GC13M071713', 'score': 550.77}, {'connected_gene': 'GC13P071705', 'score': 0.44}, {'connected_gene': 'DACH1', 'score': 0.1}]
chr13	GH13I071481	71481043	71481325	0.4	[{'connected_gene': 'GC13M071495', 'score': 0.39}, {'connected_gene': 'RABEPKP1', 'score': 0.09}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071464	71464407	71464818	0.4	[{'connected_gene': 'GC13M071495', 'score': 0.29}, {'connected_gene': 'RABEPKP1', 'score': 0.1}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071489	71489150	71489684	0.6	[{'connected_gene': 'GC13M071495', 'score': 0.44}, {'connected_gene': 'RABEPKP1', 'score': 0.08}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071437	71437966	71438321	0.4	[{'connected_gene': 'GC13M071495', 'score': 0.22}, {'connected_gene': 'RABEPKP1', 'score': 0.11}, {'connected_gene': 'DACH1', 'score': 0.04}]
chr13	GH13I071474	71474984	71475254	0.4	[{'connected_gene': 'GC13M071495', 'score': 0.34}, {'connected_gene': 'RABEPKP1', 'score': 0.1}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071465	71464875	71465091	0.51	[{'connected_gene': 'GC13M071495', 'score': 0.29}, {'connected_gene': 'RABEPKP1', 'score': 0.1}, {'connected_gene': 'DACH1', 'score': 0.05}]
chr13	GH13I071659	71659494	71659692	0.72	[{'connected_gene': 'GC13P071643', 'score': 0.37}, {'connected_gene': 'H3F3BP1', 'score': 0.37}, {'connected_gene': 'DACH1', 'score': 0.08}]
chr13	GH13I071799	71799310	71799577	0.92	[{'connected_gene': 'GC13P071789', 'score': 0.44}, {'connected_gene': 'RPL35AP31', 'score': 0.25}, {'connected_gene': 'DACH1', 'score': 0.2}]
chr13	GH13I071801	71801862	71802164	0.99	[{'connected_gene': 'GC13P071789', 'score': 0.39}, {'connected_gene': 'RPL35AP31', 'score': 0.26}, {'connected_gene': 'DACH1', 'score': 0.2}]
chr13	GH13I071798	71798558	71799060	0.96	[{'connected_gene': 'GC13P071789', 'score': 0.44}, {'connected_gene': 'RPL35AP31', 'score': 0.25}, {'connected_gene': 'DACH1', 'score': 0.19}]
chr13	GH13I071797	71797462	71797864	1.04	[{'connected_gene': 'GC13P071789', 'score': 0.44}, {'connected_gene': 'RPL35AP31', 'score': 0.25}, {'connected_gene': 'DACH1', 'score': 0.19}]