PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000511792	[[39393359, 39393495], [39394331, 39394523], [39462179, 39462402]]	[[39393359, 39393495], [39394331, 39394422]]
ENST00000509457	[[39417674, 39417712], [39418282, 39418447], [39462179, 39462256]]	None
ENST00000339788	[[39371779, 39373527], [39375115, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39388406, 39388469], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394523], [39424905, 39425082]]	[[39375120, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39388406, 39388469], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394422]]
ENST00000320816	[[39371779, 39373527], [39375115, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39382719, 39383373], [39388406, 39388469], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394523], [39424905, 39425272]]	[[39375120, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39382719, 39383373], [39388406, 39388469], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394422]]
ENST00000545653	[[39371779, 39373527], [39375115, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39382719, 39383373], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394523], [39424905, 39425335]]	[[39375120, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39382719, 39383373], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394422]]
ENST00000509337	[[39373122, 39373527], [39375115, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39382719, 39383373], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394502]]	[[39375120, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39382719, 39383373], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394422]]
ENST00000502879	[[39374846, 39375186], [39376098, 39376144]]	None
ENST00000512525	[[39385269, 39385530], [39388406, 39388469], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392541]]	None
ENST00000505968	[[39387798, 39388469], [39388900, 39388959]]	None
ENST00000507539	[[39389209, 39389225], [39389953, 39390034], [39390545, 39390677], [39392305, 39392565], [39393355, 39393495], [39394331, 39394523], [39424905, 39425015]]	[[39392445, 39392565], [39393355, 39393495], [39394331, 39394422]]
ENST00000503513	[[39393385, 39393495], [39394331, 39394523], [39423805, 39423999], [39424905, 39424970]]	[[39393385, 39393495], [39394331, 39394422]]
ENST00000515700	[[39393470, 39393495], [39394331, 39394523], [39417290, 39417386], [39418282, 39418447], [39424905, 39425078]]	[[39393470, 39393495], [39394331, 39394422]]
ENST00000513052	[[39394395, 39394523], [39408482, 39408939]]	None
ENST00000515269	[[39394455, 39394523], [39418282, 39418447], [39424905, 39424972]]	None
ENST00000511536	[[39417654, 39417712], [39418282, 39418447], [39424905, 39424972]]	None
ENST00000502388	[[39418047, 39418447], [39424905, 39425061]]	None
ENST00000507990	[[39460968, 39461353], [39462179, 39462400]]	None
NM_001343	[[39371775, 39373527], [39375115, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39382719, 39383373], [39388406, 39388469], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394523], [39424905, 39425335]]	[[39375120, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39382719, 39383373], [39388406, 39388469], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394422]]
NM_001244871	[[39371775, 39373527], [39375115, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39382719, 39383373], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394523], [39424905, 39425335]]	[[39375120, 39375186], [39376098, 39376208], [39376751, 39377384], [39381555, 39381718], [39382719, 39383373], [39388900, 39388954], [39389198, 39389225], [39389953, 39390034], [39390545, 39390677], [39392466, 39392565], [39393355, 39393495], [39394331, 39394422]]

Promoter

Chrom	Start	End	Description
chr5	39388938	39388949	CAGE_peak_6_at_DAB2_5end
chr5	39390581	39390594	CAGE_peak_12_at_DAB2_5end
chr5	39424961	39424980	CAGE_peak_1_at_C9_5end,CAGE_peak_2_at_DAB2_5end
chr5	39424998	39425006	CAGE_peak_11_at_DAB2_5end
chr5	39425015	39425020	CAGE_peak_13_at_DAB2_5end
chr5	39425045	39425067	CAGE_peak_3_at_DAB2_5end
chr5	39425068	39425098	CAGE_peak_1_at_DAB2_5end
chr5	39425107	39425112	CAGE_peak_10_at_DAB2_5end
chr5	39425163	39425178	CAGE_peak_7_at_DAB2_5end
chr5	39425222	39425283	CAGE_peak_4_at_DAB2_5end
chr5	39425290	39425336	CAGE_peak_5_at_DAB2_5end
chr5	39462221	39462233	CAGE_peak_33_at_DAB2_5end
chr5	39462245	39462252	CAGE_peak_50_at_DAB2_5end
chr5	39462267	39462297	CAGE_peak_9_at_DAB2_5end
chr5	39462298	39462311	CAGE_peak_27_at_DAB2_5end
chr5	39462314	39462332	CAGE_peak_15_at_DAB2_5end
chr5	39462336	39462343	CAGE_peak_49_at_DAB2_5end
chr5	39462348	39462359	CAGE_peak_41_at_DAB2_5end
chr5	39462363	39462369	CAGE_peak_47_at_DAB2_5end
chr5	39462390	39462405	CAGE_peak_26_at_DAB2_5end
chr5	39462422	39462430	CAGE_peak_34_at_DAB2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I039157	39157718	39159038	1.52	[{'connected_gene': 'FYB1', 'score': 17.71}, {'connected_gene': 'RICTOR', 'score': 11.36}, {'connected_gene': 'DAB2', 'score': 10.51}, {'connected_gene': 'GOLGA5P1', 'score': 0.39}, {'connected_gene': 'GC05M039106', 'score': 0.23}]
chr5	GH05I039163	39163794	39165499	1.26	[{'connected_gene': 'FYB1', 'score': 18.8}, {'connected_gene': 'RICTOR', 'score': 11.34}, {'connected_gene': 'DAB2', 'score': 10.51}, {'connected_gene': 'GOLGA5P1', 'score': 0.44}, {'connected_gene': 'GC05M039106', 'score': 0.22}]
chr5	GH05I039159	39159434	39162225	0.46	[{'connected_gene': 'FYB1', 'score': 18.37}, {'connected_gene': 'RICTOR', 'score': 11.35}, {'connected_gene': 'DAB2', 'score': 10.51}, {'connected_gene': 'GOLGA5P1', 'score': 0.44}, {'connected_gene': 'GC05M039106', 'score': 0.22}]
chr5	GH05I039268	39268401	39271000	1.36	[{'connected_gene': 'FYB1', 'score': 550.77}, {'connected_gene': 'C9', 'score': 14.64}, {'connected_gene': 'RICTOR', 'score': 9.95}, {'connected_gene': 'DAB2', 'score': 9.21}, {'connected_gene': 'GC05P039191', 'score': 0.18}]
chr5	GH05I039185	39185184	39205845	2.69	[{'connected_gene': 'FYB1', 'score': 569.26}, {'connected_gene': 'C9', 'score': 9.73}, {'connected_gene': 'DAB2', 'score': 9.72}, {'connected_gene': 'RICTOR', 'score': 4.33}, {'connected_gene': 'GC05P039191', 'score': 0.77}]
chr5	GH05I039238	39238601	39239000	0.51	[{'connected_gene': 'FYB1', 'score': 11.87}, {'connected_gene': 'C9', 'score': 9.61}, {'connected_gene': 'DAB2', 'score': 9.6}, {'connected_gene': 'GC05P039191', 'score': 0.25}]
chr5	GH05I039150	39150328	39156927	0.74	[{'connected_gene': 'RICTOR', 'score': 22.21}, {'connected_gene': 'FYB1', 'score': 17.79}, {'connected_gene': 'DAB2', 'score': 10.51}, {'connected_gene': 'GOLGA5P1', 'score': 0.37}, {'connected_gene': 'GC05M039106', 'score': 0.25}]
chr5	GH05I039394	39394200	39403428	1.69	[{'connected_gene': 'RICTOR', 'score': 13.36}, {'connected_gene': 'C9', 'score': 12.05}, {'connected_gene': 'DAB2', 'score': 11.95}, {'connected_gene': 'FYB1', 'score': 0.13}]
chr5	GH05I039458	39458468	39459848	0.8	[{'connected_gene': 'RICTOR', 'score': 21.36}, {'connected_gene': 'DAB2', 'score': 0.77}, {'connected_gene': 'C9', 'score': 0.29}]
chr5	GH05I039472	39472959	39473759	0.31	[{'connected_gene': 'C9', 'score': 10.71}, {'connected_gene': 'FYB1', 'score': 9.38}, {'connected_gene': 'DAB2', 'score': 0.39}, {'connected_gene': 'LINC02104', 'score': 0.25}]
chr5	GH05I039475	39475132	39477493	0.4	[{'connected_gene': 'C9', 'score': 10.69}, {'connected_gene': 'FYB1', 'score': 9.38}, {'connected_gene': 'DAB2', 'score': 0.39}, {'connected_gene': 'LINC02104', 'score': 0.26}]
chr5	GH05I039379	39379819	39379968	0.2	[{'connected_gene': 'C9', 'score': 11.17}, {'connected_gene': 'DAB2', 'score': 11.09}, {'connected_gene': 'FYB1', 'score': 0.14}]
chr5	GH05I039380	39380343	39381669	0.31	[{'connected_gene': 'C9', 'score': 10.75}, {'connected_gene': 'DAB2', 'score': 10.66}, {'connected_gene': 'FYB1', 'score': 0.14}]
chr5	GH05I039364	39364485	39364544	0.93	[{'connected_gene': 'C9', 'score': 550.21}, {'connected_gene': 'DAB2', 'score': 10.38}, {'connected_gene': 'FYB1', 'score': 0.17}]
chr5	GH05I039376	39376379	39376448	0.76	[{'connected_gene': 'C9', 'score': 11.19}, {'connected_gene': 'DAB2', 'score': 11.11}, {'connected_gene': 'FYB1', 'score': 0.15}]
chr5	GH05I039382	39382070	39384152	0.2	[{'connected_gene': 'C9', 'score': 11.31}, {'connected_gene': 'DAB2', 'score': 11.23}, {'connected_gene': 'FYB1', 'score': 9.51}]
chr5	GH05I039390	39390530	39392049	0.2	[{'connected_gene': 'C9', 'score': 11.97}, {'connected_gene': 'DAB2', 'score': 11.87}, {'connected_gene': 'FYB1', 'score': 0.13}]
chr5	GH05I039359	39359516	39362271	0.54	[{'connected_gene': 'C9', 'score': 10.68}, {'connected_gene': 'DAB2', 'score': 10.62}, {'connected_gene': 'FYB1', 'score': 0.17}]
chr5	GH05I039368	39368185	39371633	0.73	[{'connected_gene': 'C9', 'score': 11.07}, {'connected_gene': 'DAB2', 'score': 11.0}, {'connected_gene': 'FYB1', 'score': 0.15}]
chr5	GH05I039469	39469920	39470600	0.54	[{'connected_gene': 'C9', 'score': 11.0}, {'connected_gene': 'DAB2', 'score': 6.72}, {'connected_gene': 'LINC02104', 'score': 0.23}]
chr5	GH05I039470	39469347	39469623	0.23	[{'connected_gene': 'C9', 'score': 11.01}, {'connected_gene': 'DAB2', 'score': 0.44}, {'connected_gene': 'LINC02104', 'score': 0.23}]
chr5	GH05I039428	39428759	39428928	0.62	[{'connected_gene': 'C9', 'score': 0.77}, {'connected_gene': 'DAB2', 'score': 0.29}]
chr5	GH05I039429	39429250	39429438	0.33	[{'connected_gene': 'C9', 'score': 0.77}, {'connected_gene': 'DAB2', 'score': 0.29}]
chr5	GH05I039441	39441905	39442823	0.51	[{'connected_gene': 'C9', 'score': 0.37}, {'connected_gene': 'DAB2', 'score': 0.37}]
chr5	GH05I039431	39431718	39434929	0.4	[{'connected_gene': 'DAB2', 'score': 11.5}, {'connected_gene': 'LIFR', 'score': 5.64}, {'connected_gene': 'C9', 'score': 0.44}]
chr5	GH05I039330	39330895	39333536	0.38	[{'connected_gene': 'DAB2', 'score': 10.47}, {'connected_gene': 'FYB1', 'score': 9.99}, {'connected_gene': 'C9', 'score': 7.39}]
chr5	GH05I039543	39543229	39544148	1.38	[{'connected_gene': 'DAB2', 'score': 11.29}, {'connected_gene': 'C9', 'score': 11.24}, {'connected_gene': 'FYB1', 'score': 1.3}, {'connected_gene': 'LINC02104', 'score': 0.34}, {'connected_gene': 'CCDC11P1', 'score': 0.31}]
chr5	GH05I039523	39523560	39528235	1.41	[{'connected_gene': 'DAB2', 'score': 11.43}, {'connected_gene': 'C9', 'score': 11.36}, {'connected_gene': 'ENSG00000251189', 'score': 6.21}, {'connected_gene': 'FYB1', 'score': 2.51}, {'connected_gene': 'LINC02104', 'score': 0.44}, {'connected_gene': 'CCDC11P1', 'score': 0.25}]
chr5	GH05I039547	39547377	39548224	1.09	[{'connected_gene': 'DAB2', 'score': 11.47}, {'connected_gene': 'C9', 'score': 11.43}, {'connected_gene': 'FYB1', 'score': 9.38}, {'connected_gene': 'CCDC11P1', 'score': 0.34}, {'connected_gene': 'LINC02104', 'score': 0.31}]
chr5	GH05I039418	39418370	39428197	2.45	[{'connected_gene': 'DAB2', 'score': 561.02}, {'connected_gene': 'C9', 'score': 550.77}, {'connected_gene': 'FYB1', 'score': 0.11}]
chr5	GH05I039412	39412765	39413728	0.77	[{'connected_gene': 'DAB2', 'score': 10.48}, {'connected_gene': 'C9', 'score': 0.39}, {'connected_gene': 'FYB1', 'score': 0.12}]
chr5	GH05I039415	39415107	39417221	0.2	[{'connected_gene': 'DAB2', 'score': 10.94}, {'connected_gene': 'C9', 'score': 0.44}, {'connected_gene': 'FYB1', 'score': 0.11}]
chr5	GH05I039410	39410677	39412496	1.3	[{'connected_gene': 'DAB2', 'score': 10.47}, {'connected_gene': 'C9', 'score': 0.39}, {'connected_gene': 'FYB1', 'score': 0.12}]
chr5	GH05I039404	39404481	39407212	0.31	[{'connected_gene': 'DAB2', 'score': 11.96}, {'connected_gene': 'C9', 'score': 0.37}, {'connected_gene': 'FYB1', 'score': 0.12}]
chr5	GH05I039533	39533093	39535247	0.4	[{'connected_gene': 'DAB2', 'score': 12.15}, {'connected_gene': 'C9', 'score': 12.1}, {'connected_gene': 'LINC02104', 'score': 0.39}, {'connected_gene': 'CCDC11P1', 'score': 0.28}]
chr5	GH05I039538	39538959	39540168	0.2	[{'connected_gene': 'DAB2', 'score': 10.73}, {'connected_gene': 'C9', 'score': 10.65}, {'connected_gene': 'LINC02104', 'score': 0.37}, {'connected_gene': 'CCDC11P1', 'score': 0.29}]
chr5	GH05I039493	39493891	39495251	0.76	[{'connected_gene': 'DAB2', 'score': 11.69}, {'connected_gene': 'C9', 'score': 11.6}, {'connected_gene': 'LINC02104', 'score': 0.31}]
chr5	GH05I039512	39512732	39514152	0.89	[{'connected_gene': 'DAB2', 'score': 10.96}, {'connected_gene': 'C9', 'score': 10.48}, {'connected_gene': 'LINC02104', 'score': 0.44}]
chr5	GH05I039500	39500007	39504075	1.04	[{'connected_gene': 'DAB2', 'score': 11.67}, {'connected_gene': 'C9', 'score': 11.58}, {'connected_gene': 'LINC02104', 'score': 0.37}]
chr5	GH05I039504	39504949	39507359	0.4	[{'connected_gene': 'DAB2', 'score': 11.21}, {'connected_gene': 'C9', 'score': 11.12}, {'connected_gene': 'LINC02104', 'score': 0.39}]
chr5	GH05I039486	39486178	39486186	0.23	[{'connected_gene': 'DAB2', 'score': 11.19}, {'connected_gene': 'C9', 'score': 10.95}, {'connected_gene': 'LINC02104', 'score': 0.29}]
chr5	GH05I039580	39580824	39581298	0.38	[{'connected_gene': 'DAB2', 'score': 11.28}, {'connected_gene': 'C9', 'score': 11.26}, {'connected_gene': 'CCDC11P1', 'score': 0.44}, {'connected_gene': 'INTS6P1', 'score': 0.11}]
chr5	GH05I039436	39436965	39439343	1.28	[{'connected_gene': 'DAB2', 'score': 11.52}, {'connected_gene': 'C9', 'score': 0.39}]
chr5	GH05I039442	39441079	39441228	0.63	[{'connected_gene': 'DAB2', 'score': 11.02}, {'connected_gene': 'C9', 'score': 0.37}]
chr5	GH05I039446	39446115	39449155	1.08	[{'connected_gene': 'DAB2', 'score': 0.39}, {'connected_gene': 'C9', 'score': 0.34}]
chr5	GH05I039460	39460619	39461621	0.51	[{'connected_gene': 'DAB2', 'score': 550.77}, {'connected_gene': 'C9', 'score': 0.28}]
chr5	GH05I039459	39459959	39460108	0.2	[{'connected_gene': 'DAB2', 'score': 0.77}, {'connected_gene': 'C9', 'score': 0.28}]
chr5	GH05I039462	39462299	39462448	0.2	[{'connected_gene': 'DAB2', 'score': 550.77}, {'connected_gene': 'LINC02104', 'score': 0.22}]
chr5	GH05I039464	39464239	39464388	0.2	[{'connected_gene': 'DAB2', 'score': 0.77}, {'connected_gene': 'LINC02104', 'score': 0.22}]
chr5	GH05I039466	39466019	39466168	0.2	[{'connected_gene': 'DAB2', 'score': 0.77}, {'connected_gene': 'LINC02104', 'score': 0.23}]
chr5	GH05I039521	39521844	39522942	0.31	[{'connected_gene': 'LINC02104', 'score': 550.77}, {'connected_gene': 'DAB2', 'score': 11.43}, {'connected_gene': 'C9', 'score': 11.37}, {'connected_gene': 'CCDC11P1', 'score': 0.23}]
chr5	GH05I039516	39516424	39521281	1.42	[{'connected_gene': 'LINC02104', 'score': 550.77}, {'connected_gene': 'DAB2', 'score': 12.93}, {'connected_gene': 'C9', 'score': 11.37}]
chr5	GH05I039168	39168776	39172556	0.46	[{'connected_gene': 'GOLGA5P1', 'score': 550.77}, {'connected_gene': 'FYB1', 'score': 21.96}, {'connected_gene': 'C9', 'score': 9.03}, {'connected_gene': 'DAB2', 'score': 9.02}, {'connected_gene': 'GC05P039191', 'score': 0.34}]