PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000437102	[[42897496, 42897963], [42915961, 42917390]]	[[42897819, 42897963], [42915961, 42917308]]
ENST00000316161	[[42913683, 42917633]]	[[42915802, 42917308]]
NM_004391	[[42913683, 42917633]]	[[42915802, 42917308]]

Promoter

Chrom	Start	End	Description
chr3	42916749	42916758	CAGE_peak_7_at_CYP8B1_5end
chr3	42916795	42916809	CAGE_peak_6_at_CYP8B1_5end
chr3	42917325	42917328	CAGE_peak_8_at_CYP8B1_5end
chr3	42917329	42917355	CAGE_peak_1_at_CYP8B1_5end
chr3	42917363	42917377	CAGE_peak_2_at_CYP8B1_5end
chr3	42917405	42917412	CAGE_peak_5_at_CYP8B1_5end
chr3	42917432	42917446	CAGE_peak_3_at_CYP8B1_5end
chr3	42917447	42917459	CAGE_peak_4_at_CYP8B1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I042890	42890096	42892438	0.56	[{'connected_gene': 'HNRNPA1P22', 'score': 550.77}, {'connected_gene': 'CCDC13', 'score': 7.1}, {'connected_gene': 'CYP8B1', 'score': 4.69}, {'connected_gene': 'GC03M042884', 'score': 0.77}, {'connected_gene': 'KRBOX1', 'score': 0.18}, {'connected_gene': 'ENSG00000273328', 'score': 0.18}, {'connected_gene': 'ENSG00000273291', 'score': 0.18}]
chr3	GH03I042880	42880401	42881678	1.45	[{'connected_gene': 'NKTR', 'score': 18.34}, {'connected_gene': 'HIGD1A', 'score': 15.01}, {'connected_gene': 'SNRK-AS1', 'score': 13.2}, {'connected_gene': 'ENSG00000235288', 'score': 12.11}, {'connected_gene': 'ACKR2', 'score': 11.98}, {'connected_gene': 'ZNF662', 'score': 11.23}, {'connected_gene': 'CCDC13', 'score': 10.81}, {'connected_gene': 'LINC02158', 'score': 10.8}, {'connected_gene': 'KRBOX1', 'score': 10.68}, {'connected_gene': 'CYP8B1', 'score': 7.29}, {'connected_gene': 'POMGNT2', 'score': 1.24}, {'connected_gene': 'HNRNPA1P22', 'score': 0.44}, {'connected_gene': 'ENSG00000273328', 'score': 0.19}, {'connected_gene': 'ENSG00000273291', 'score': 0.19}]
chr3	GH03I042875	42875845	42875904	1.16	[{'connected_gene': 'CYP8B1', 'score': 550.77}, {'connected_gene': 'GC03P042857', 'score': 0.34}, {'connected_gene': 'GC03P042856', 'score': 0.34}, {'connected_gene': 'KRBOX1', 'score': 0.2}, {'connected_gene': 'ENSG00000273328', 'score': 0.2}, {'connected_gene': 'ENSG00000273291', 'score': 0.2}, {'connected_gene': 'ACKR2', 'score': 0.19}]
chr3	GH03I042850	42850865	42856784	1.37	[{'connected_gene': 'GC03P042857', 'score': 550.77}, {'connected_gene': 'GC03P042856', 'score': 550.77}, {'connected_gene': 'ENSG00000235288', 'score': 550.77}, {'connected_gene': 'ACKR2', 'score': 5.67}, {'connected_gene': 'CCDC13', 'score': 5.61}, {'connected_gene': 'CYP8B1', 'score': 5.4}, {'connected_gene': 'CCDC13-AS1', 'score': 4.93}, {'connected_gene': 'FAM198A', 'score': 4.82}, {'connected_gene': 'KRBOX1', 'score': 0.26}, {'connected_gene': 'ENSG00000273328', 'score': 0.26}, {'connected_gene': 'ENSG00000273291', 'score': 0.26}]