PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000286688	[[96257146, 96259998], [96264415, 96264511], [96272067, 96272133], [96272695, 96272760], [96275914, 96276002], [96281262, 96281429]]	[[96259844, 96259998], [96264415, 96264511], [96272067, 96272133], [96272695, 96272760], [96275914, 96276002], [96281262, 96281417]]
NM_177965	[[96257140, 96259998], [96264415, 96264511], [96272067, 96272133], [96272695, 96272760], [96275914, 96276002], [96281262, 96281462]]	[[96259844, 96259998], [96264415, 96264511], [96272067, 96272133], [96272695, 96272760], [96275914, 96276002], [96281262, 96281417]]

Promoter

Chrom	Start	End	Description
chr8	96281419	96281444	CAGE_peak_1_at_C8orf37_5end
chr8	96281501	96281522	CAGE_peak_3_at_C8orf37_5end
chr8	96281627	96281658	CAGE_peak_2_at_C8orf37_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I094946	94946965	94951642	2.22	[{'connected_gene': 'TP53INP1', 'score': 559.8}, {'connected_gene': 'ENSG00000253878', 'score': 550.77}, {'connected_gene': 'NDUFAF6', 'score': 6.79}, {'connected_gene': 'C8orf37', 'score': 4.52}, {'connected_gene': 'CCNE2', 'score': 0.23}]
chr8	GH08I095248	95248793	95248982	0.96	[{'connected_gene': 'PLEKHF2', 'score': 11.81}, {'connected_gene': 'INTS8', 'score': 10.74}, {'connected_gene': 'ENSG00000253878', 'score': 10.53}, {'connected_gene': 'TP53INP1', 'score': 10.53}, {'connected_gene': 'TRS-AGA2-5', 'score': 0.34}, {'connected_gene': 'C8orf37', 'score': 0.34}, {'connected_gene': 'LINC01298', 'score': 0.29}, {'connected_gene': 'C8orf37-AS1', 'score': 0.26}]
chr8	GH08I095220	95220102	95221871	0.43	[{'connected_gene': 'PLEKHF2', 'score': 10.54}, {'connected_gene': 'C8orf37', 'score': 4.8}, {'connected_gene': 'LINC01298', 'score': 0.77}, {'connected_gene': 'C8orf37-AS1', 'score': 0.37}, {'connected_gene': 'TRS-AGA2-5', 'score': 0.25}]
chr8	GH08I095228	95228363	95230580	1.09	[{'connected_gene': 'PLEKHF2', 'score': 10.92}, {'connected_gene': 'C8orf37', 'score': 5.86}, {'connected_gene': 'LINC01298', 'score': 0.39}, {'connected_gene': 'C8orf37-AS1', 'score': 0.31}, {'connected_gene': 'TRS-AGA2-5', 'score': 0.26}]
chr8	GH08I095236	95236693	95237055	0.63	[{'connected_gene': 'PLEKHF2', 'score': 10.96}, {'connected_gene': 'RNU6-1209P', 'score': 10.93}, {'connected_gene': 'ENSG00000253878', 'score': 10.43}, {'connected_gene': 'TP53INP1', 'score': 10.43}, {'connected_gene': 'C8orf37', 'score': 5.87}, {'connected_gene': 'LINC01298', 'score': 0.34}, {'connected_gene': 'C8orf37-AS1', 'score': 0.29}, {'connected_gene': 'TRS-AGA2-5', 'score': 0.29}]
chr8	GH08I095237	95237253	95238557	0.97	[{'connected_gene': 'PLEKHF2', 'score': 10.96}, {'connected_gene': 'RNU6-1209P', 'score': 10.93}, {'connected_gene': 'ENSG00000253878', 'score': 10.43}, {'connected_gene': 'TP53INP1', 'score': 10.43}, {'connected_gene': 'C8orf37', 'score': 5.87}, {'connected_gene': 'LINC01298', 'score': 0.34}, {'connected_gene': 'C8orf37-AS1', 'score': 0.29}, {'connected_gene': 'TRS-AGA2-5', 'score': 0.29}]
chr8	GH08I096260	96260138	96265430	2.09	[{'connected_gene': 'MTERF3', 'score': 559.79}, {'connected_gene': 'PTDSS1', 'score': 550.77}, {'connected_gene': 'C8orf37', 'score': 10.71}, {'connected_gene': 'GC08P096270', 'score': 0.44}, {'connected_gene': 'LOC105375652', 'score': 0.34}]
chr8	GH08I096103	96103296	96105553	0.8	[{'connected_gene': 'MTERF3', 'score': 11.64}, {'connected_gene': 'GDF6', 'score': 11.45}, {'connected_gene': 'C8orf37', 'score': 11.31}, {'connected_gene': 'TUBBP7', 'score': 0.34}, {'connected_gene': 'GAPDHP30', 'score': 0.29}]
chr8	GH08I094718	94718637	94721525	2.14	[{'connected_gene': 'DPY19L4', 'score': 556.16}, {'connected_gene': 'VIRMA', 'score': 75.65}, {'connected_gene': 'RBM12B', 'score': 50.15}, {'connected_gene': 'INTS8', 'score': 49.38}, {'connected_gene': 'C8orf37', 'score': 39.47}, {'connected_gene': 'NDUFAF6', 'score': 13.25}, {'connected_gene': 'RPL34P18', 'score': 11.26}, {'connected_gene': 'TMEM67', 'score': 10.99}, {'connected_gene': 'ENSG00000272509', 'score': 10.57}, {'connected_gene': 'ESRP1', 'score': 10.12}, {'connected_gene': 'ENSG00000253704', 'score': 9.77}, {'connected_gene': 'ENSG00000254307', 'score': 0.19}]
chr8	GH08I095249	95248065	95248770	0.75	[{'connected_gene': 'C8orf37', 'score': 12.68}, {'connected_gene': 'PLEKHF2', 'score': 11.82}, {'connected_gene': 'INTS8', 'score': 10.74}, {'connected_gene': 'ENSG00000253878', 'score': 10.53}, {'connected_gene': 'TP53INP1', 'score': 10.53}, {'connected_gene': 'TRS-AGA2-5', 'score': 0.34}, {'connected_gene': 'LINC01298', 'score': 0.29}, {'connected_gene': 'C8orf37-AS1', 'score': 0.26}]
chr8	GH08I095267	95267856	95271238	2.12	[{'connected_gene': 'C8orf37', 'score': 563.74}, {'connected_gene': 'TRS-AGA2-5', 'score': 550.77}, {'connected_gene': 'VIRMA', 'score': 62.5}, {'connected_gene': 'INTS8', 'score': 56.34}, {'connected_gene': 'ENSG00000272509', 'score': 11.48}, {'connected_gene': 'ENSG00000253704', 'score': 10.65}, {'connected_gene': 'ENSG00000253878', 'score': 10.43}, {'connected_gene': 'MTERF3', 'score': 4.99}, {'connected_gene': 'LINC01298', 'score': 0.23}, {'connected_gene': 'C8orf37-AS1', 'score': 0.2}]
chr8	GH08I095230	95230917	95231881	0.58	[{'connected_gene': 'RNU6-1209P', 'score': 11.25}, {'connected_gene': 'PLEKHF2', 'score': 11.11}, {'connected_gene': 'C8orf37', 'score': 5.9}, {'connected_gene': 'LINC01298', 'score': 0.37}, {'connected_gene': 'C8orf37-AS1', 'score': 0.31}, {'connected_gene': 'TRS-AGA2-5', 'score': 0.28}]
chr8	GH08I094963	94963115	94964974	1.17	[{'connected_gene': 'MIR3150BHG', 'score': 9.8}, {'connected_gene': 'TP53INP1', 'score': 8.57}, {'connected_gene': 'NDUFAF6', 'score': 5.87}, {'connected_gene': 'C8orf37', 'score': 4.37}, {'connected_gene': 'PLEKHF2', 'score': 1.84}, {'connected_gene': 'ENSG00000253528', 'score': 0.39}, {'connected_gene': 'ENSG00000253878', 'score': 0.39}]
chr8	GH08I095318	95318653	95318702	0.2	[{'connected_gene': 'FSBP', 'score': 4.17}, {'connected_gene': 'GC08P095334', 'score': 0.37}, {'connected_gene': 'C8orf37', 'score': 0.25}, {'connected_gene': 'C8orf37-AS1', 'score': 0.14}]
chr8	GH08I095223	95223053	95227552	1.38	[{'connected_gene': 'ENSG00000254248', 'score': 11.33}, {'connected_gene': 'PLEKHF2', 'score': 11.1}, {'connected_gene': 'CCNE2', 'score': 10.31}, {'connected_gene': 'C8orf37', 'score': 5.46}, {'connected_gene': 'LINC01298', 'score': 0.44}, {'connected_gene': 'C8orf37-AS1', 'score': 0.34}, {'connected_gene': 'TRS-AGA2-5', 'score': 0.26}]
chr8	GH08I095334	95334093	95334242	0.54	[{'connected_gene': 'GC08P095334', 'score': 550.77}, {'connected_gene': 'C8orf37', 'score': 0.21}, {'connected_gene': 'C8orf37-AS1', 'score': 0.13}]
chr8	GH08I095335	95334245	95335100	0.43	[{'connected_gene': 'GC08P095334', 'score': 550.77}, {'connected_gene': 'C8orf37', 'score': 0.21}, {'connected_gene': 'C8orf37-AS1', 'score': 0.12}]
chr8	GH08I095317	95317593	95318462	0.72	[{'connected_gene': 'GC08P095334', 'score': 0.37}, {'connected_gene': 'C8orf37', 'score': 0.25}, {'connected_gene': 'C8orf37-AS1', 'score': 0.14}]