PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000304916	[[127564686, 127569730], [127570278, 127570638]]	[[127568701, 127569634]]
ENST00000517458	[[127565059, 127565748], [127568509, 127568664]]	None
NM_174911	[[127564682, 127569730], [127570278, 127570711]]	[[127568701, 127569634]]

Promoter

Chrom	Start	End	Description
chr8	127567083	127567087	CAGE_peak_6_at_FAM84B_5end
chr8	127569936	127570038	CAGE_peak_3_at_FAM84B_5end
chr8	127570603	127570648	CAGE_peak_1_at_FAM84B_5end
chr8	127570656	127570667	CAGE_peak_5_at_FAM84B_5end
chr8	127570676	127570690	CAGE_peak_4_at_FAM84B_5end
chr8	127570706	127570729	CAGE_peak_2_at_FAM84B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I126562	126562112	126563379	0.72	[{'connected_gene': 'SRRM1P1', 'score': 10.95}, {'connected_gene': 'FAM84B', 'score': 5.17}, {'connected_gene': 'PIR61718', 'score': 0.44}, {'connected_gene': 'LOC105375751', 'score': 0.44}]
chr8	GH08I126824	126824076	126829766	1.46	[{'connected_gene': 'FAM84B', 'score': 17.15}, {'connected_gene': 'MYC', 'score': 9.59}, {'connected_gene': 'CASC11', 'score': 9.59}, {'connected_gene': 'GC08P126836', 'score': 0.44}, {'connected_gene': 'LOC105375753', 'score': 0.34}, {'connected_gene': 'RNU11-4P', 'score': 0.1}]
chr8	GH08I126831	126831506	126836048	1.17	[{'connected_gene': 'FAM84B', 'score': 1.28}, {'connected_gene': 'GC08P126836', 'score': 0.77}, {'connected_gene': 'LOC105375753', 'score': 0.39}, {'connected_gene': 'RNU11-4P', 'score': 0.1}]
chr8	GH08I126553	126553352	126559493	2.18	[{'connected_gene': 'FAM84B', 'score': 557.2}, {'connected_gene': 'ENSG00000254010', 'score': 550.77}, {'connected_gene': 'LOC105375751', 'score': 550.77}, {'connected_gene': 'LOC105375750', 'score': 0.23}]
chr8	GH08I126432	126432991	126436622	1.25	[{'connected_gene': 'FAM84B', 'score': 56.01}, {'connected_gene': 'LOC105375751', 'score': 10.71}, {'connected_gene': 'ENSG00000253427', 'score': 0.28}, {'connected_gene': 'LOC101927657', 'score': 0.14}]
chr8	GH08I126648	126648830	126649239	0.22	[{'connected_gene': 'FAM84B', 'score': 42.53}, {'connected_gene': 'GC08P126672', 'score': 0.34}, {'connected_gene': 'ENSG00000253543', 'score': 0.2}, {'connected_gene': 'LOC105375751', 'score': 0.16}]
chr8	GH08I126530	126530526	126535376	1.02	[{'connected_gene': 'FAM84B', 'score': 5.17}, {'connected_gene': 'ENSG00000254010', 'score': 0.34}, {'connected_gene': 'LOC105375750', 'score': 0.31}]
chr8	GH08I126545	126545955	126548634	1	[{'connected_gene': 'FAM84B', 'score': 5.91}, {'connected_gene': 'ENSG00000254010', 'score': 0.44}, {'connected_gene': 'LOC105375750', 'score': 0.26}]
chr8	GH08I126522	126522604	126523485	0.4	[{'connected_gene': 'FAM84B', 'score': 6.37}, {'connected_gene': 'LOC105375750', 'score': 0.37}, {'connected_gene': 'ENSG00000254010', 'score': 0.29}]
chr8	GH08I126476	126476862	126476942	0.22	[{'connected_gene': 'FAM84B', 'score': 2.02}, {'connected_gene': 'ENSG00000253427', 'score': 0.77}, {'connected_gene': 'LOC105375749', 'score': 0.34}]
chr8	GH08I126496	126496320	126502352	0.82	[{'connected_gene': 'FAM84B', 'score': 10.14}, {'connected_gene': 'LOC105375749', 'score': 0.77}, {'connected_gene': 'GC08P126505', 'score': 0.44}]
chr8	GH08I127058	127058083	127058384	0.24	[{'connected_gene': 'FAM84B', 'score': 13.12}, {'connected_gene': 'PRNCR1', 'score': 0.34}, {'connected_gene': 'PIR56595', 'score': 0.17}]
chr8	GH08I126904	126904621	126904933	0.33	[{'connected_gene': 'FAM84B', 'score': 2.76}, {'connected_gene': 'GC08M126872', 'score': 0.34}, {'connected_gene': 'GC08M126909', 'score': 0.26}, {'connected_gene': 'PCAT1', 'score': 0.22}]
chr8	GH08I126916	126916525	126916888	0.38	[{'connected_gene': 'FAM84B', 'score': 14.52}, {'connected_gene': 'GC08M126909', 'score': 0.29}, {'connected_gene': 'GC08M126872', 'score': 0.28}, {'connected_gene': 'PCAT1', 'score': 0.2}]
chr8	GH08I126505	126505045	126507721	0.52	[{'connected_gene': 'RNU6-869P', 'score': 550.77}, {'connected_gene': 'LOC105375750', 'score': 550.77}, {'connected_gene': 'GC08P126505', 'score': 550.77}, {'connected_gene': 'FAM84B', 'score': 16.3}, {'connected_gene': 'LOC105375751', 'score': 11.64}, {'connected_gene': 'ENSG00000254010', 'score': 0.23}]
chr8	GH08I126504	126504296	126504445	0.31	[{'connected_gene': 'RNU6-869P', 'score': 550.77}, {'connected_gene': 'LOC105375750', 'score': 550.77}, {'connected_gene': 'GC08P126505', 'score': 550.77}, {'connected_gene': 'FAM84B', 'score': 9.43}, {'connected_gene': 'LOC105375749', 'score': 0.44}]
chr8	GH08I126695	126695676	126695865	0.31	[{'connected_gene': 'LOC105375751', 'score': 10.49}, {'connected_gene': 'FAM84B', 'score': 10.49}, {'connected_gene': 'RNU11-4P', 'score': 0.34}, {'connected_gene': 'GC08P126836', 'score': 0.11}]
chr8	GH08I126510	126510396	126510625	0.77	[{'connected_gene': 'LOC105375751', 'score': 11.66}, {'connected_gene': 'FAM84B', 'score': 11.66}, {'connected_gene': 'LOC105375750', 'score': 0.77}, {'connected_gene': 'ENSG00000254010', 'score': 0.25}]
chr8	GH08I126383	126383776	126383965	0.57	[{'connected_gene': 'LOC105375751', 'score': 10.45}, {'connected_gene': 'FAM84B', 'score': 10.45}, {'connected_gene': 'LOC101927657', 'score': 0.22}, {'connected_gene': 'ENSG00000253427', 'score': 0.16}]
chr8	GH08I126395	126395036	126395185	0.52	[{'connected_gene': 'LOC105375751', 'score': 10.19}, {'connected_gene': 'FAM84B', 'score': 10.19}, {'connected_gene': 'LOC101927657', 'score': 0.2}, {'connected_gene': 'ENSG00000253427', 'score': 0.18}]
chr8	GH08I126578	126578925	126581018	1.03	[{'connected_gene': 'LOC105375751', 'score': 11.96}, {'connected_gene': 'FAM84B', 'score': 11.96}, {'connected_gene': 'ENSG00000253543', 'score': 0.77}, {'connected_gene': 'PIR61718', 'score': 0.39}]
chr8	GH08I126582	126582547	126583962	0.69	[{'connected_gene': 'ENSG00000253543', 'score': 550.77}, {'connected_gene': 'FAM84B', 'score': 11.96}, {'connected_gene': 'LOC105375751', 'score': 11.93}, {'connected_gene': 'GC08P126672', 'score': 0.17}]
chr8	GH08I126563	126563566	126565635	0.66	[{'connected_gene': 'PIR61718', 'score': 0.77}, {'connected_gene': 'LOC105375751', 'score': 0.44}, {'connected_gene': 'FAM84B', 'score': 0.44}]