PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000369562	[[88117700, 88117807], [88119552, 88119665], [88120302, 88120386], [88123527, 88123618], [88125403, 88125592], [88126386, 88126545], [88127925, 88128134], [88136243, 88136363], [88138343, 88138542], [88140750, 88140891], [88144577, 88144771], [88170739, 88170883], [88173737, 88174183]]	[[88119557, 88119665], [88120302, 88120386], [88123527, 88123618], [88125403, 88125592], [88126386, 88126545], [88127925, 88128134], [88136243, 88136363], [88138343, 88138542], [88140750, 88140891], [88144577, 88144771], [88170739, 88170883], [88173737, 88173968]]
ENST00000296885	[[88117730, 88117807], [88119552, 88119665], [88120302, 88120386], [88123527, 88123618], [88125403, 88125592], [88126386, 88126545], [88127925, 88128134], [88136243, 88136363], [88138343, 88138542], [88140750, 88140891], [88144577, 88145775]]	None
ENST00000489338	[[88117743, 88117807], [88119556, 88119665], [88120302, 88120386], [88123527, 88123618], [88125280, 88125592], [88126386, 88126545], [88127925, 88128134], [88136243, 88136363], [88138343, 88138542], [88140750, 88140891], [88144577, 88144771], [88170739, 88170883], [88173737, 88174178]]	[[88119557, 88119665], [88120302, 88120386], [88123527, 88123618], [88125280, 88125285]]
ENST00000480123	[[88118206, 88118496], [88119552, 88119665], [88120302, 88120386], [88123527, 88123618], [88125403, 88125592], [88126386, 88126545], [88127925, 88128049]]	[[88119557, 88119665], [88120302, 88120386], [88123527, 88123618], [88125403, 88125592], [88126386, 88126545], [88127925, 88128049]]
NM_001031743	[[88117689, 88117807], [88119552, 88119665], [88120302, 88120386], [88123527, 88123618], [88125403, 88125592], [88126386, 88126545], [88127925, 88128134], [88136243, 88136363], [88138343, 88138542], [88140750, 88140891], [88144577, 88144771], [88170739, 88170883], [88173737, 88174191]]	[[88119557, 88119665], [88120302, 88120386], [88123527, 88123618], [88125403, 88125592], [88126386, 88126545], [88127925, 88128134], [88136243, 88136363], [88138343, 88138542], [88140750, 88140891], [88144577, 88144771], [88170739, 88170883], [88173737, 88173968]]

Promoter

Chrom	Start	End	Description
chr6	88117683	88117751	CAGE_peak_1_at_C6orf165_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I087436	87436401	87436801	0.95	[{'connected_gene': 'ORC3', 'score': 19.23}, {'connected_gene': 'ENSG00000272008', 'score': 11.21}, {'connected_gene': 'LINC01590', 'score': 11.11}, {'connected_gene': 'SLC35A1', 'score': 5.99}, {'connected_gene': 'LOC100420741', 'score': 0.44}, {'connected_gene': 'TAF13P1', 'score': 0.39}, {'connected_gene': 'ENSG00000213204', 'score': 0.31}, {'connected_gene': 'CFAP206', 'score': 0.31}]
chr6	GH06I087450	87450569	87450580	0.22	[{'connected_gene': 'RNU6-444P', 'score': 11.35}, {'connected_gene': 'ST13P16', 'score': 0.44}, {'connected_gene': 'SLC35A1', 'score': 0.34}, {'connected_gene': 'ENSG00000213204', 'score': 0.26}, {'connected_gene': 'CFAP206', 'score': 0.26}]
chr6	GH06I087393	87393163	87393292	0.67	[{'connected_gene': 'SLC35A1', 'score': 13.33}, {'connected_gene': 'CFAP206', 'score': 0.39}, {'connected_gene': 'GC06P087375', 'score': 0.37}, {'connected_gene': 'SMIM8', 'score': 0.19}, {'connected_gene': 'LINC01590', 'score': 0.19}]
chr6	GH06I087421	87421185	87422263	0.71	[{'connected_gene': 'SLC35A1', 'score': 12.02}, {'connected_gene': 'RNU6-444P', 'score': 10.54}, {'connected_gene': 'CFAP206', 'score': 6.77}, {'connected_gene': 'GC06M087427', 'score': 0.77}, {'connected_gene': 'PIR56225', 'score': 0.77}, {'connected_gene': 'ENSG00000213204', 'score': 0.39}]
chr6	GH06I087444	87444296	87445083	0.43	[{'connected_gene': 'ST13P16', 'score': 550.77}, {'connected_gene': 'SLC35A1', 'score': 11.95}, {'connected_gene': 'RNU6-444P', 'score': 11.3}, {'connected_gene': 'LOC100420741', 'score': 0.77}, {'connected_gene': 'ENSG00000213204', 'score': 0.28}, {'connected_gene': 'CFAP206', 'score': 0.28}]
chr6	GH06I087407	87407201	87409271	1.95	[{'connected_gene': 'ENSG00000213204', 'score': 550.77}, {'connected_gene': 'CFAP206', 'score': 550.77}, {'connected_gene': 'SLC35A1', 'score': 16.57}, {'connected_gene': 'GC06M087427', 'score': 0.37}, {'connected_gene': 'PIR56225', 'score': 0.37}]