PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000369295	[[115803805, 115806667]]	[[115803891, 115805325]]
NM_000684	[[115803805, 115806667]]	[[115803891, 115805325]]

Promoter

Chrom	Start	End	Description
chr10	115803583	115803609	CAGE_peak_2_at_ADRB1_5end
chr10	115803618	115803641	CAGE_peak_1_at_ADRB1_5end
chr10	115803650	115803661	CAGE_peak_4_at_ADRB1_5end
chr10	115805581	115805585	CAGE_peak_3_at_ADRB1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I113799	113799682	113799851	0.63	[{'connected_gene': 'CASP7', 'score': 15.51}, {'connected_gene': 'ENSG00000234393', 'score': 10.72}, {'connected_gene': 'ADRB1', 'score': 10.34}, {'connected_gene': 'PLEKHS1', 'score': 10.06}, {'connected_gene': 'TDRD1', 'score': 9.98}, {'connected_gene': 'ENSG00000212589', 'score': 0.34}, {'connected_gene': 'MIR4483', 'score': 0.34}]
chr10	GH10I113788	113788429	113789520	1.01	[{'connected_gene': 'CASP7', 'score': 22.83}, {'connected_gene': 'ENSG00000234393', 'score': 11.43}, {'connected_gene': 'RNU6-709P', 'score': 11.39}, {'connected_gene': 'PLEKHS1', 'score': 11.05}, {'connected_gene': 'ADRB1', 'score': 10.05}, {'connected_gene': 'NRAP', 'score': 9.81}, {'connected_gene': 'MIR4483', 'score': 0.39}, {'connected_gene': 'ENSG00000212589', 'score': 0.29}]
chr10	GH10I114150	114150949	114152403	0.52	[{'connected_gene': 'TDRD1', 'score': 21.5}, {'connected_gene': 'VWA2', 'score': 19.56}, {'connected_gene': 'RNU6-709P', 'score': 11.51}, {'connected_gene': 'ADRB1', 'score': 10.09}, {'connected_gene': 'ENSG00000273904', 'score': 0.37}, {'connected_gene': 'CCDC186', 'score': 0.34}, {'connected_gene': 'UBE2V1P5', 'score': 0.29}]
chr10	GH10I114697	114697871	114699202	0.52	[{'connected_gene': 'ABLIM1', 'score': 17.28}, {'connected_gene': 'ADRB1', 'score': 4.36}, {'connected_gene': 'PPIAP19', 'score': 0.44}, {'connected_gene': 'LOC101927692', 'score': 0.2}]
chr10	GH10I114678	114678200	114679523	0.38	[{'connected_gene': 'ABLIM1', 'score': 12.19}, {'connected_gene': 'ADRB1', 'score': 4.64}, {'connected_gene': 'PPIAP19', 'score': 0.39}, {'connected_gene': 'ENSG00000229668', 'score': 0.1}]
chr10	GH10I114681	114681483	114686631	1.82	[{'connected_gene': 'ABLIM1', 'score': 562.2}, {'connected_gene': 'ADRB1', 'score': 4.68}, {'connected_gene': 'PPIAP19', 'score': 0.44}, {'connected_gene': 'ENSG00000229668', 'score': 0.09}]
chr10	GH10I113923	113923862	113924814	0.31	[{'connected_gene': 'ADRB1', 'score': 10.96}, {'connected_gene': 'ENSG00000234393', 'score': 10.29}, {'connected_gene': 'CASP7', 'score': 10.28}, {'connected_gene': 'PLEKHS1', 'score': 9.6}, {'connected_gene': 'GC10P113911', 'score': 0.39}, {'connected_gene': 'LOC105378492', 'score': 0.18}]
chr10	GH10I113956	113956799	113962601	1.38	[{'connected_gene': 'ADRB1', 'score': 11.42}, {'connected_gene': 'CASP7', 'score': 4.59}, {'connected_gene': 'LOC105378492', 'score': 0.25}, {'connected_gene': 'GC10P113911', 'score': 0.25}]
chr10	GH10I113891	113891642	113891791	0.31	[{'connected_gene': 'ADRB1', 'score': 11.11}, {'connected_gene': 'TDRD1', 'score': 9.57}, {'connected_gene': 'GC10P113911', 'score': 0.34}, {'connected_gene': 'NHLRC2', 'score': 0.28}]
chr10	GH10I114042	114042482	114047579	1.54	[{'connected_gene': 'ADRB1', 'score': 557.93}, {'connected_gene': 'GC10P114045', 'score': 550.77}, {'connected_gene': 'GC10M114041', 'score': 550.77}, {'connected_gene': 'CCDC186', 'score': 13.78}]
chr10	GH10I113865	113865879	113866400	0.2	[{'connected_gene': 'ADRB1', 'score': 10.36}, {'connected_gene': 'NHLRC2', 'score': 0.39}, {'connected_gene': 'GC10P113911', 'score': 0.25}]
chr10	GH10I114073	114073851	114074395	0.84	[{'connected_gene': 'ADRB1', 'score': 12.38}, {'connected_gene': 'VWA2', 'score': 7.65}, {'connected_gene': 'PLEKHS1', 'score': 1.93}, {'connected_gene': 'GC10M114063', 'score': 0.44}, {'connected_gene': 'RNU6-709P', 'score': 0.28}]
chr10	GH10I114083	114082062	114082211	0.49	[{'connected_gene': 'ADRB1', 'score': 11.14}, {'connected_gene': 'VWA2', 'score': 9.22}, {'connected_gene': 'GC10M114063', 'score': 0.37}, {'connected_gene': 'RNU6-709P', 'score': 0.31}]
chr10	GH10I113999	113999201	113999800	0.2	[{'connected_gene': 'ADRB1', 'score': 11.52}, {'connected_gene': 'RNU6-709P', 'score': 10.91}, {'connected_gene': 'TDRD1', 'score': 9.4}, {'connected_gene': 'NRAP', 'score': 9.39}, {'connected_gene': 'LOC105378492', 'score': 0.44}, {'connected_gene': 'GC10P113911', 'score': 0.17}]
chr10	GH10I114022	114022382	114022511	0.52	[{'connected_gene': 'ADRB1', 'score': 13.0}, {'connected_gene': 'LOC105378493', 'score': 0.77}, {'connected_gene': 'LOC105378492', 'score': 0.39}]
chr10	GH10I114041	114041063	114042327	0.43	[{'connected_gene': 'ADRB1', 'score': 0.77}, {'connected_gene': 'GC10M114041', 'score': 0.77}, {'connected_gene': 'LOC105378493', 'score': 0.39}]
chr10	GH10I114029	114029626	114030457	0.2	[{'connected_gene': 'ADRB1', 'score': 6.48}, {'connected_gene': 'LOC105378493', 'score': 0.77}]
chr10	GH10I114040	114040055	114040748	0.2	[{'connected_gene': 'ADRB1', 'score': 0.77}, {'connected_gene': 'LOC105378493', 'score': 0.39}]
chr10	GH10I113937	113937942	113938051	0.6	[{'connected_gene': 'ADRB1', 'score': 11.39}, {'connected_gene': 'GC10P113911', 'score': 0.31}, {'connected_gene': 'LOC105378492', 'score': 0.19}]
chr10	GH10I113993	113993201	113994083	0.38	[{'connected_gene': 'ADRB1', 'score': 11.4}, {'connected_gene': 'LOC105378492', 'score': 0.39}, {'connected_gene': 'GC10P113911', 'score': 0.18}]
chr10	GH10I113965	113965401	113966200	0.6	[{'connected_gene': 'ADRB1', 'score': 11.56}, {'connected_gene': 'LOC105378492', 'score': 0.26}, {'connected_gene': 'GC10P113911', 'score': 0.23}]
chr10	GH10I113944	113944574	113946111	0.94	[{'connected_gene': 'ADRB1', 'score': 10.75}, {'connected_gene': 'GC10P113911', 'score': 0.29}, {'connected_gene': 'LOC105378492', 'score': 0.21}]
chr10	GH10I113801	113801562	113801771	0.2	[{'connected_gene': 'ADRB1', 'score': 10.48}, {'connected_gene': 'ENSG00000212589', 'score': 0.37}, {'connected_gene': 'MIR4483', 'score': 0.34}]
chr10	GH10I113981	113981588	113984351	0.6	[{'connected_gene': 'RNU6-709P', 'score': 11.37}, {'connected_gene': 'ADRB1', 'score': 11.19}, {'connected_gene': 'CASP7', 'score': 4.76}, {'connected_gene': 'LOC105378492', 'score': 0.31}, {'connected_gene': 'GC10P113911', 'score': 0.19}]
chr10	GH10I113946	113946850	113948378	0.97	[{'connected_gene': 'RNU6-709P', 'score': 11.59}, {'connected_gene': 'ADRB1', 'score': 11.39}, {'connected_gene': 'TDRD1', 'score': 9.29}, {'connected_gene': 'PLEKHS1', 'score': 9.22}, {'connected_gene': 'GC10P113911', 'score': 0.28}, {'connected_gene': 'LOC105378492', 'score': 0.21}]
chr10	GH10I114082	114082276	114083495	0.62	[{'connected_gene': 'RNU6-709P', 'score': 12.92}, {'connected_gene': 'ADRB1', 'score': 12.32}, {'connected_gene': 'GC10M114063', 'score': 0.37}]
chr10	GH10I114024	114024499	114028343	1.11	[{'connected_gene': 'LOC105378493', 'score': 550.77}, {'connected_gene': 'ADRB1', 'score': 6.43}, {'connected_gene': 'LOC105378492', 'score': 0.37}]
chr10	GH10I114066	114066465	114067573	0.31	[{'connected_gene': 'GC10M114063', 'score': 550.77}, {'connected_gene': 'ADRB1', 'score': 17.38}, {'connected_gene': 'RNU6-709P', 'score': 0.26}]
chr10	GH10I114067	114067816	114069115	0.38	[{'connected_gene': 'GC10M114063', 'score': 550.77}, {'connected_gene': 'ADRB1', 'score': 12.68}, {'connected_gene': 'RNU6-709P', 'score': 0.26}]
chr10	GH10I114064	114064250	114065091	0.76	[{'connected_gene': 'GC10M114063', 'score': 550.77}, {'connected_gene': 'ADRB1', 'score': 12.68}, {'connected_gene': 'GC10P114045', 'score': 0.37}]