PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000294445	[[47011315, 47013481], [47014864, 47014939], [47015605, 47015684]]	None
ENST00000524908	[[47013020, 47013481], [47014864, 47014939], [47015378, 47015405]]	None
ENST00000481882	[[47013051, 47013481], [47014864, 47014939], [47015605, 47015674], [47016736, 47017199]]	[[47013401, 47013481], [47014864, 47014939], [47015605, 47015674], [47016736, 47016887]]
ENST00000396314	[[47013099, 47013481], [47014864, 47014939], [47016736, 47016887]]	[[47013401, 47013481], [47014864, 47014939], [47016736, 47016887]]
NM_001322255	[[47011309, 47013481], [47014864, 47014939], [47015605, 47015674], [47016736, 47017329]]	[[47013401, 47013481], [47014864, 47014939], [47015605, 47015674], [47016736, 47016887]]
NM_001097611	[[47011315, 47013481], [47014864, 47014939], [47016736, 47016887]]	[[47013401, 47013481], [47014864, 47014939], [47016736, 47016887]]

Promoter

Chrom	Start	End	Description
chr1	47015424	47015432	CAGE_peak_1_at_KNCN_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I046603	46603039	46605700	2	[{'connected_gene': 'MKNK1', 'score': 574.72}, {'connected_gene': 'GC01P046604', 'score': 550.77}, {'connected_gene': 'EFCAB14', 'score': 11.23}, {'connected_gene': 'TEX38', 'score': 10.86}, {'connected_gene': 'ATPAF1', 'score': 10.85}, {'connected_gene': 'EFCAB14-AS1', 'score': 10.85}, {'connected_gene': 'KNCN', 'score': 0.23}]
chr1	GH01I046594	46594013	46595999	0.89	[{'connected_gene': 'MKNK1', 'score': 38.06}, {'connected_gene': 'MOB3C', 'score': 11.54}, {'connected_gene': 'EFCAB14', 'score': 10.78}, {'connected_gene': 'TEX38', 'score': 10.46}, {'connected_gene': 'ATPAF1', 'score': 10.45}, {'connected_gene': 'EFCAB14-AS1', 'score': 10.45}, {'connected_gene': 'GC01P046604', 'score': 0.44}, {'connected_gene': 'KNCN', 'score': 0.26}]
chr1	GH01I046580	46580451	46581200	0.83	[{'connected_gene': 'MKNK1', 'score': 26.85}, {'connected_gene': 'GC01P046604', 'score': 0.34}, {'connected_gene': 'KNCN', 'score': 0.31}]
chr1	GH01I046583	46581650	46581958	0.63	[{'connected_gene': 'MKNK1', 'score': 27.55}, {'connected_gene': 'GC01P046604', 'score': 0.34}, {'connected_gene': 'KNCN', 'score': 0.29}]
chr1	GH01I046549	46549229	46550425	0.6	[{'connected_gene': 'KNCN', 'score': 550.77}, {'connected_gene': 'MKNK1', 'score': 8.06}, {'connected_gene': 'CMPK1', 'score': 4.45}, {'connected_gene': 'MKNK1-AS1', 'score': 0.39}]
chr1	GH01I046516	46516549	46518609	1.05	[{'connected_gene': 'KNCN', 'score': 11.97}, {'connected_gene': 'MOB3C', 'score': 5.03}, {'connected_gene': 'MKNK1', 'score': 5.0}, {'connected_gene': 'GC01P046525', 'score': 0.44}, {'connected_gene': 'DMBX1', 'score': 0.31}]
chr1	GH01I046556	46556800	46557201	0.63	[{'connected_gene': 'KNCN', 'score': 0.44}, {'connected_gene': 'MKNK1-AS1', 'score': 0.37}, {'connected_gene': 'GC01P046604', 'score': 0.25}]
chr1	GH01I046519	46519827	46523387	1.47	[{'connected_gene': 'EFCAB14-AS1', 'score': 33.93}, {'connected_gene': 'GPBP1L1', 'score': 28.96}, {'connected_gene': 'LRRC41', 'score': 27.27}, {'connected_gene': 'RPL7AP16', 'score': 26.78}, {'connected_gene': 'DMBX1', 'score': 18.33}, {'connected_gene': 'RPS15AP10', 'score': 11.99}, {'connected_gene': 'KNCN', 'score': 11.95}, {'connected_gene': 'EFCAB14', 'score': 11.06}, {'connected_gene': 'MOB3C', 'score': 10.78}, {'connected_gene': 'TEX38', 'score': 10.04}, {'connected_gene': 'ATPAF1', 'score': 10.04}, {'connected_gene': 'MKNK1', 'score': 6.61}, {'connected_gene': 'CYP4Z1', 'score': 4.92}, {'connected_gene': 'FAAH', 'score': 4.58}, {'connected_gene': 'GC01P046525', 'score': 0.77}]
chr1	GH01I046581	46581401	46581601	0.46	[{'connected_gene': 'GC01P046604', 'score': 0.34}, {'connected_gene': 'KNCN', 'score': 0.31}, {'connected_gene': 'MKNK1', 'score': 0.28}]
chr1	GH01I046582	46581969	46582118	0.62	[{'connected_gene': 'GC01P046604', 'score': 0.34}, {'connected_gene': 'KNCN', 'score': 0.29}, {'connected_gene': 'MKNK1', 'score': 0.29}]
chr1	GH01I046527	46527049	46527258	0.74	[{'connected_gene': 'GC01P046525', 'score': 550.77}, {'connected_gene': 'DMBX1', 'score': 12.59}, {'connected_gene': 'KNCN', 'score': 11.99}, {'connected_gene': 'EFCAB14', 'score': 10.05}, {'connected_gene': 'MKNK1', 'score': 5.19}, {'connected_gene': 'LOC105378696', 'score': 0.44}]
chr1	GH01I046523	46523661	46524127	0.52	[{'connected_gene': 'GC01P046525', 'score': 550.77}, {'connected_gene': 'DMBX1', 'score': 12.61}, {'connected_gene': 'KNCN', 'score': 11.96}, {'connected_gene': 'EFCAB14', 'score': 10.05}, {'connected_gene': 'FAAH', 'score': 4.54}]