PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000597424	[[21264964, 21265154], [21299634, 21300018]]	[[21299932, 21300018]]
ENST00000596053	[[21264979, 21265154], [21266783, 21266875], [21280990, 21281117], [21281620, 21281716], [21307763, 21308073]]	[[21281074, 21281117], [21281620, 21281716], [21307763, 21307957]]
ENST00000597086	[[21265004, 21265154], [21280990, 21281117], [21299634, 21300003]]	[[21299932, 21300003]]
ENST00000596143	[[21265005, 21265154], [21266783, 21266875], [21280990, 21281117], [21281617, 21281716], [21299612, 21305954]]	[[21281074, 21281117], [21281617, 21281716], [21299612, 21301135]]
ENST00000596367	[[21265008, 21265154], [21280990, 21281117], [21281620, 21281716], [21299612, 21299887]]	[[21265151, 21265154], [21280990, 21281117], [21281620, 21281716], [21299612, 21299887]]
ENST00000601416	[[21265008, 21265154], [21266783, 21266875], [21280990, 21281117], [21281620, 21281716], [21292428, 21292450], [21299612, 21301688]]	[[21281074, 21281117], [21281620, 21281716], [21292428, 21292450], [21299612, 21299706]]
ENST00000600770	[[21265008, 21265154], [21266783, 21266875], [21280990, 21281117], [21281620, 21281716], [21292428, 21292450], [21299612, 21301688], [21307763, 21307897]]	[[21281074, 21281117], [21281620, 21281716], [21292428, 21292450], [21299612, 21299706]]
ENST00000600435	[[21265014, 21265154], [21266783, 21266875], [21280990, 21281117], [21281617, 21281716], [21299612, 21301688], [21307763, 21307897]]	[[21281074, 21281117], [21281617, 21281716], [21299612, 21301135]]
ENST00000291770	[[21265055, 21265154], [21266783, 21266875], [21280990, 21281117], [21281617, 21281716], [21299634, 21301280]]	[[21281074, 21281117], [21281617, 21281716], [21299634, 21299660]]
ENST00000600535	[[21266825, 21266875], [21273716, 21274564]]	None
NR_117088	[[21264952, 21265154], [21266783, 21266875], [21280990, 21281117], [21281620, 21281716], [21307763, 21307897]]	None
NR_117086	[[21264952, 21265154], [21266783, 21266875], [21280990, 21281117], [21281620, 21281716], [21292428, 21292450], [21299612, 21301688], [21307763, 21307897]]	None
NR_117087	[[21264952, 21265154], [21266783, 21266875], [21280990, 21281117], [21281617, 21281716], [21299612, 21301688], [21307763, 21307897]]	None
NM_182515	[[21264952, 21265154], [21266783, 21266875], [21280990, 21281117], [21281617, 21281716], [21299612, 21307897]]	[[21281074, 21281117], [21281617, 21281716], [21299612, 21301135]]

Promoter

Chrom	Start	End	Description
chr19	21264943	21264958	CAGE_peak_3_at_ZNF714_5end
chr19	21264991	21265026	CAGE_peak_1_at_ZNF714_5end
chr19	21265028	21265052	CAGE_peak_2_at_ZNF714_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I021019	21019975	21024577	2.18	[{'connected_gene': 'ZNF430', 'score': 550.77}, {'connected_gene': 'ZNF100', 'score': 22.82}, {'connected_gene': 'LOC641367', 'score': 22.08}, {'connected_gene': 'ZNF714', 'score': 22.01}, {'connected_gene': 'ZNF90', 'score': 19.49}, {'connected_gene': 'BNIP3P26', 'score': 18.57}, {'connected_gene': 'RPL7AP10', 'score': 17.68}, {'connected_gene': 'ZNF66', 'score': 14.57}, {'connected_gene': 'ZNF431', 'score': 13.79}, {'connected_gene': 'ZNF486', 'score': 13.19}, {'connected_gene': 'BNIP3P16', 'score': 12.52}, {'connected_gene': 'VN1R82P', 'score': 11.73}, {'connected_gene': 'LOC101928960', 'score': 10.87}, {'connected_gene': 'ZNF429', 'score': 6.49}, {'connected_gene': 'ZNF738', 'score': 4.38}, {'connected_gene': 'ENSG00000271598', 'score': 0.77}]
chr19	GH19I021091	21091091	21092882	0.38	[{'connected_gene': 'ZNF431', 'score': 6.18}, {'connected_gene': 'ZNF429', 'score': 4.39}, {'connected_gene': 'ZNF714', 'score': 0.44}, {'connected_gene': 'GC19M022124', 'score': 0.34}, {'connected_gene': 'RNA5SP469', 'score': 0.34}]
chr19	GH19I021141	21141125	21144781	1.98	[{'connected_gene': 'ZNF431', 'score': 550.77}, {'connected_gene': 'ZNF100', 'score': 12.96}, {'connected_gene': 'ZNF708', 'score': 12.57}, {'connected_gene': 'ZNF714', 'score': 11.84}, {'connected_gene': 'LOC641367', 'score': 10.93}, {'connected_gene': 'ENSG00000268555', 'score': 10.71}, {'connected_gene': 'LOC105372321', 'score': 6.59}, {'connected_gene': 'ZNF738', 'score': 5.56}, {'connected_gene': 'ZNF429', 'score': 4.7}, {'connected_gene': 'RPL7AP10', 'score': 0.44}]
chr19	GH19I021027	21027793	21029143	0.9	[{'connected_gene': 'ZNF714', 'score': 21.06}, {'connected_gene': 'ENSG00000271598', 'score': 0.77}, {'connected_gene': 'ZNF430', 'score': 0.44}, {'connected_gene': 'VN1R80P', 'score': 0.28}]
chr19	GH19I021081	21081535	21083401	1.96	[{'connected_gene': 'ZNF714', 'score': 562.04}, {'connected_gene': 'LOC641367', 'score': 25.51}, {'connected_gene': 'ZNF100', 'score': 20.92}, {'connected_gene': 'BNIP3P26', 'score': 18.34}, {'connected_gene': 'RPL7AP10', 'score': 10.84}, {'connected_gene': 'BNIP3P16', 'score': 10.75}, {'connected_gene': 'ZNF431', 'score': 6.17}, {'connected_gene': 'GC19M022124', 'score': 0.29}, {'connected_gene': 'RNA5SP469', 'score': 0.29}]
chr19	GH19I021126	21126618	21130798	1.05	[{'connected_gene': 'ZNF714', 'score': 22.07}, {'connected_gene': 'ZNF431', 'score': 6.72}, {'connected_gene': 'LOC105372321', 'score': 5.99}, {'connected_gene': 'BNIP3P17', 'score': 4.8}, {'connected_gene': 'ZNF493', 'score': 4.22}, {'connected_gene': 'VN1R81P', 'score': 0.77}]
chr19	GH19I021138	21138238	21138407	0.46	[{'connected_gene': 'ZNF714', 'score': 11.86}, {'connected_gene': 'ZNF431', 'score': 0.77}, {'connected_gene': 'VN1R81P', 'score': 0.39}]
chr19	GH19I021100	21100911	21102137	0.31	[{'connected_gene': 'ZNF714', 'score': 7.92}, {'connected_gene': 'LOC105372321', 'score': 5.62}, {'connected_gene': 'ZNF493', 'score': 5.07}, {'connected_gene': 'GC19M022124', 'score': 0.39}, {'connected_gene': 'RNA5SP469', 'score': 0.39}]
chr19	GH19I021083	21083594	21083622	0.2	[{'connected_gene': 'ZNF714', 'score': 550.77}, {'connected_gene': 'GC19M022124', 'score': 0.31}, {'connected_gene': 'RNA5SP469', 'score': 0.31}]
chr19	GH19I021084	21083745	21085027	0.52	[{'connected_gene': 'ZNF714', 'score': 8.72}, {'connected_gene': 'GC19M022124', 'score': 0.31}, {'connected_gene': 'RNA5SP469', 'score': 0.31}]
chr19	GH19I021087	21087163	21087222	0.5	[{'connected_gene': 'ZNF714', 'score': 550.44}, {'connected_gene': 'GC19M022124', 'score': 0.31}, {'connected_gene': 'RNA5SP469', 'score': 0.31}]