PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000569691	[[55700745, 55700984], [55710420, 55710910]]	[[55700966, 55700984], [55710420, 55710768]]
ENST00000570794	[[55709895, 55709957], [55710420, 55710962]]	None
NM_001198784	[[55700722, 55700984], [55710420, 55710910]]	[[55700966, 55700984], [55710420, 55710768]]

Promoter

Chrom	Start	End	Description
chr15	55700677	55700738	CAGE_peak_1_at_FLJ27352_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I055394	55394803	55394952	0.49	[{'connected_gene': 'MIR628', 'score': 11.53}, {'connected_gene': 'C15orf65', 'score': 7.85}, {'connected_gene': 'DNAAF4', 'score': 4.72}, {'connected_gene': 'GC15M057427', 'score': 0.77}, {'connected_gene': 'CCPG1', 'score': 0.39}, {'connected_gene': 'DNAAF4-CCPG1', 'score': 0.15}]
chr15	GH15I055194	55194906	55198317	1.83	[{'connected_gene': 'RSL24D1', 'score': 559.81}, {'connected_gene': 'PIGB', 'score': 24.14}, {'connected_gene': 'PIGBOS1', 'score': 10.26}, {'connected_gene': 'RAB27A', 'score': 10.02}, {'connected_gene': 'C15orf65', 'score': 4.2}, {'connected_gene': 'ENSG00000279145', 'score': 0.37}, {'connected_gene': 'GC15M057438', 'score': 0.31}]
chr15	GH15I055497	55497600	55499140	1.92	[{'connected_gene': 'DNAAF4', 'score': 556.74}, {'connected_gene': 'DNAAF4-CCPG1', 'score': 550.77}, {'connected_gene': 'RSL24D1', 'score': 13.48}, {'connected_gene': 'PYGO1', 'score': 11.65}, {'connected_gene': 'C15orf65', 'score': 10.38}, {'connected_gene': 'PIGB', 'score': 9.63}, {'connected_gene': 'LOC100420711', 'score': 0.22}]
chr15	GH15I055388	55388595	55389941	0.54	[{'connected_gene': 'C15orf65', 'score': 9.82}, {'connected_gene': 'PIGB', 'score': 5.45}, {'connected_gene': 'GC15M057427', 'score': 0.44}, {'connected_gene': 'MIR628', 'score': 0.37}, {'connected_gene': 'CCPG1', 'score': 0.37}, {'connected_gene': 'DNAAF4-CCPG1', 'score': 0.14}]
chr15	GH15I055401	55401729	55409389	2.1	[{'connected_gene': 'C15orf65', 'score': 560.67}, {'connected_gene': 'CCPG1', 'score': 550.77}, {'connected_gene': 'RSL24D1', 'score': 23.81}, {'connected_gene': 'NEDD4', 'score': 11.87}, {'connected_gene': 'PYGO1', 'score': 11.58}, {'connected_gene': 'DNAAF4', 'score': 11.28}, {'connected_gene': 'PIGBOS1', 'score': 10.62}, {'connected_gene': 'PIGB', 'score': 7.14}, {'connected_gene': 'GC15M057427', 'score': 0.44}, {'connected_gene': 'DNAAF4-CCPG1', 'score': 0.16}]
chr15	GH15I055396	55396659	55397557	0.87	[{'connected_gene': 'GC15M057427', 'score': 550.77}, {'connected_gene': 'MIR628', 'score': 13.11}, {'connected_gene': 'C15orf65', 'score': 10.86}, {'connected_gene': 'PIGB', 'score': 7.05}, {'connected_gene': 'DNAAF4', 'score': 6.32}, {'connected_gene': 'CCPG1', 'score': 0.39}, {'connected_gene': 'DNAAF4-CCPG1', 'score': 0.15}]
chr15	GH15I055439	55439783	55439912	0.57	[{'connected_gene': 'GC15P055441', 'score': 550.77}, {'connected_gene': 'RSL24D1', 'score': 10.01}, {'connected_gene': 'C15orf65', 'score': 0.29}, {'connected_gene': 'DNAAF4-CCPG1', 'score': 0.22}, {'connected_gene': 'DNAAF4', 'score': 0.2}]