PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000554218	[[58605818, 58606132], [58758352, 58758425], [58764672, 58764857]]	None
ENST00000267485	[[58467478, 58471522], [58471765, 58471900], [58478836, 58478868], [58563441, 58563699], [58598229, 58598439], [58599807, 58600059], [58604707, 58606132], [58618792, 58618931]]	[[58471453, 58471522], [58471765, 58471900], [58478836, 58478868], [58563441, 58563699], [58598229, 58598439], [58599807, 58600059], [58604707, 58606076]]
ENST00000557175	[[58582833, 58583225], [58598229, 58598439], [58599807, 58600059], [58605065, 58605959]]	None
ENST00000334342	[[58582841, 58583225], [58598229, 58598439], [58599807, 58600059], [58604707, 58606132], [58618792, 58618901]]	None
ENST00000556788	[[58466452, 58466567], [58470624, 58470742]]	None
ENST00000555101	[[58597924, 58598439], [58599807, 58599849]]	None

Promoter

Chrom	Start	End	Description
chr14	58618867	58618894	CAGE_peak_3_at_C14orf37_5end
chr14	58618896	58618939	CAGE_peak_2_at_C14orf37_5end
chr14	58764824	58764863	CAGE_peak_1_at_C14orf37_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I058242	58242808	58246401	2.23	[{'connected_gene': 'PSMA3', 'score': 550.77}, {'connected_gene': 'RNU6-341P', 'score': 12.61}, {'connected_gene': 'C14orf37', 'score': 12.6}, {'connected_gene': 'ARID4A', 'score': 12.6}, {'connected_gene': 'PSMA3-AS1', 'score': 9.04}, {'connected_gene': 'ENSG00000258682', 'score': 7.94}, {'connected_gene': 'TRK-CTT1-1', 'score': 0.77}, {'connected_gene': 'GC14P058110', 'score': 0.12}]
chr14	GH14I058280	58280564	58282943	1.56	[{'connected_gene': 'ACTR10', 'score': 22.62}, {'connected_gene': 'TOMM20L', 'score': 10.84}, {'connected_gene': 'ENSG00000258682', 'score': 8.7}, {'connected_gene': 'ARID4A', 'score': 5.8}, {'connected_gene': 'HMGB1P14', 'score': 0.77}, {'connected_gene': 'PIR55001', 'score': 0.39}, {'connected_gene': 'C14orf37', 'score': 0.37}, {'connected_gene': 'PSMA3-AS1', 'score': 0.37}]
chr14	GH14I058199	58199200	58201614	1.93	[{'connected_gene': 'ACTR10', 'score': 550.77}, {'connected_gene': 'PSMA3-AS1', 'score': 6.16}, {'connected_gene': 'C14orf37', 'score': 5.93}, {'connected_gene': 'TRK-CTT1-1', 'score': 0.28}, {'connected_gene': 'GC14P058110', 'score': 0.17}]
chr14	GH14I058198	58198203	58198352	0.31	[{'connected_gene': 'ACTR10', 'score': 550.77}, {'connected_gene': 'GC14P058189', 'score': 0.44}, {'connected_gene': 'GC14P058110', 'score': 0.17}, {'connected_gene': 'C14orf37', 'score': 0.15}]
chr14	GH14I058138	58138091	58138684	0.72	[{'connected_gene': 'ACTR10', 'score': 13.97}, {'connected_gene': 'ENSG00000259969', 'score': 4.82}, {'connected_gene': 'UBA52P3', 'score': 0.77}, {'connected_gene': 'PIR47835', 'score': 0.37}, {'connected_gene': 'GC14P058110', 'score': 0.31}, {'connected_gene': 'C14orf37', 'score': 0.1}]
chr14	GH14I058287	58287643	58287792	0.9	[{'connected_gene': 'LINC00216', 'score': 550.77}, {'connected_gene': 'HMGB1P14', 'score': 0.77}, {'connected_gene': 'C14orf37', 'score': 0.39}, {'connected_gene': 'PSMA3-AS1', 'score': 0.39}]
chr14	GH14I058104	58104883	58105032	0.75	[{'connected_gene': 'TOMM20L', 'score': 20.1}, {'connected_gene': 'ENSG00000259969', 'score': 11.88}, {'connected_gene': 'SLC35F4', 'score': 11.36}, {'connected_gene': 'RPL31P4', 'score': 10.08}, {'connected_gene': 'LOC440181', 'score': 9.8}, {'connected_gene': 'GC14M058071', 'score': 0.77}, {'connected_gene': 'GC14P058110', 'score': 0.44}, {'connected_gene': 'C14orf37', 'score': 0.08}]
chr14	GH14I058274	58274508	58276383	0.51	[{'connected_gene': 'TOMM20L', 'score': 11.15}, {'connected_gene': 'ENSG00000258682', 'score': 7.76}, {'connected_gene': 'PIR55001', 'score': 0.77}, {'connected_gene': 'HMGB1P14', 'score': 0.44}, {'connected_gene': 'C14orf37', 'score': 0.34}, {'connected_gene': 'PSMA3-AS1', 'score': 0.34}]
chr14	GH14I058296	58296200	58300650	2.53	[{'connected_gene': 'PSMA3-AS1', 'score': 570.55}, {'connected_gene': 'ARID4A', 'score': 557.25}, {'connected_gene': 'C14orf37', 'score': 550.77}, {'connected_gene': 'KIAA0586', 'score': 25.08}, {'connected_gene': 'ENSG00000258682', 'score': 24.68}, {'connected_gene': 'TIMM9', 'score': 13.82}, {'connected_gene': 'TOMM20L', 'score': 10.77}, {'connected_gene': 'ACTR10', 'score': 6.46}, {'connected_gene': 'GC14P058345', 'score': 0.25}]
chr14	GH14I057977	57977319	57977579	0.22	[{'connected_gene': 'SLC35F4', 'score': 8.25}, {'connected_gene': 'ACTR10', 'score': 1.37}, {'connected_gene': 'C14orf37', 'score': 1.35}, {'connected_gene': 'GC14M057931', 'score': 0.39}]
chr14	GH14I057760	57760270	57760649	0.22	[{'connected_gene': 'SLC35F4', 'score': 13.62}, {'connected_gene': 'NAA30', 'score': 2.76}, {'connected_gene': 'ACTR10', 'score': 1.76}, {'connected_gene': 'EXOC5', 'score': 1.61}, {'connected_gene': 'C14orf37', 'score': 1.51}, {'connected_gene': 'RN7SKP99', 'score': 0.18}, {'connected_gene': 'GC14M057656', 'score': 0.18}]
chr14	GH14I058283	58283125	58284541	0.82	[{'connected_gene': 'HMGB1P14', 'score': 550.77}, {'connected_gene': 'ENSG00000258682', 'score': 5.77}, {'connected_gene': 'C14orf37', 'score': 0.39}, {'connected_gene': 'PSMA3-AS1', 'score': 0.39}, {'connected_gene': 'PIR55001', 'score': 0.39}]
chr14	GH14I058151	58151243	58152915	1.8	[{'connected_gene': 'C14orf37', 'score': 560.48}, {'connected_gene': 'GC14P058142', 'score': 0.39}, {'connected_gene': 'RN7SL598P', 'score': 0.31}, {'connected_gene': 'GC14P058110', 'score': 0.26}]
chr14	GH14I058076	58076996	58079613	0.77	[{'connected_gene': 'C14orf37', 'score': 10.53}, {'connected_gene': 'LOC100420347', 'score': 0.34}, {'connected_gene': 'GC14M058071', 'score': 0.34}, {'connected_gene': 'GC14M058040', 'score': 0.31}]
chr14	GH14I058081	58081424	58083331	0.92	[{'connected_gene': 'C14orf37', 'score': 10.62}, {'connected_gene': 'LOC100420347', 'score': 0.37}, {'connected_gene': 'GC14M058071', 'score': 0.37}, {'connected_gene': 'GC14M058040', 'score': 0.29}]
chr14	GH14I058072	58072703	58072832	0.64	[{'connected_gene': 'C14orf37', 'score': 7.86}, {'connected_gene': 'GC14M058040', 'score': 0.34}, {'connected_gene': 'LOC100420347', 'score': 0.31}, {'connected_gene': 'GC14M058071', 'score': 0.31}]
chr14	GH14I058131	58131432	58131892	0.74	[{'connected_gene': 'UBA52P3', 'score': 0.44}, {'connected_gene': 'PIR47835', 'score': 0.39}, {'connected_gene': 'GC14P058110', 'score': 0.34}, {'connected_gene': 'C14orf37', 'score': 0.1}]
chr14	GH14I058133	58133043	58133192	0.2	[{'connected_gene': 'UBA52P3', 'score': 0.44}, {'connected_gene': 'PIR47835', 'score': 0.39}, {'connected_gene': 'GC14P058110', 'score': 0.34}, {'connected_gene': 'C14orf37', 'score': 0.1}]
chr14	GH14I058260	58260120	58260720	0.24	[{'connected_gene': 'RNU6-341P', 'score': 11.7}, {'connected_gene': 'TOMM20L', 'score': 10.32}, {'connected_gene': 'ENSG00000258682', 'score': 0.77}, {'connected_gene': 'PSMA3', 'score': 0.37}, {'connected_gene': 'C14orf37', 'score': 0.28}]
chr14	GH14I058238	58238020	58240999	1.6	[{'connected_gene': 'TRK-CTT1-1', 'score': 550.77}, {'connected_gene': 'ARID4A', 'score': 12.77}, {'connected_gene': 'DACT1', 'score': 12.75}, {'connected_gene': 'KIAA0586', 'score': 10.26}, {'connected_gene': 'ENSG00000258682', 'score': 7.5}, {'connected_gene': 'PSMA3-AS1', 'score': 7.34}, {'connected_gene': 'C14orf37', 'score': 5.44}, {'connected_gene': 'ACTR10', 'score': 0.28}, {'connected_gene': 'GC14P058110', 'score': 0.13}]
chr14	GH14I058271	58271639	58273614	1.07	[{'connected_gene': 'PIR55001', 'score': 550.77}, {'connected_gene': 'ENSG00000258682', 'score': 8.15}, {'connected_gene': 'HMGB1P14', 'score': 0.39}, {'connected_gene': 'PSMA3', 'score': 0.31}, {'connected_gene': 'C14orf37', 'score': 0.31}, {'connected_gene': 'PSMA3-AS1', 'score': 0.31}]
chr14	GH14I058121	58121053	58121196	0.2	[{'connected_gene': 'PIR47835', 'score': 550.77}, {'connected_gene': 'GC14P058110', 'score': 0.39}, {'connected_gene': 'C14orf37', 'score': 0.1}]
chr14	GH14I058166	58166401	58166801	0.87	[{'connected_gene': 'ENSG00000259969', 'score': 5.16}, {'connected_gene': 'RN7SL598P', 'score': 0.39}, {'connected_gene': 'GC14P058142', 'score': 0.31}, {'connected_gene': 'GC14P058110', 'score': 0.22}, {'connected_gene': 'C14orf37', 'score': 0.12}]
chr14	GH14I058170	58170651	58171852	1.43	[{'connected_gene': 'ENSG00000259969', 'score': 4.38}, {'connected_gene': 'RN7SL598P', 'score': 0.44}, {'connected_gene': 'GC14P058142', 'score': 0.31}, {'connected_gene': 'GC14P058110', 'score': 0.21}, {'connected_gene': 'C14orf37', 'score': 0.13}]