PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000380184	[[5535622, 5537935]]	[[5536243, 5537671]]
NM_145053	[[5535622, 5537956]]	[[5536243, 5537671]]

Promoter

Chrom	Start	End	Description
chr11	5537900	5537907	CAGE_peak_2_at_UBQLNL_5end
chr11	5537920	5537934	CAGE_peak_1_at_UBQLNL_5end
chr11	5537937	5537942	CAGE_peak_3_at_UBQLNL_5end
chr11	5537955	5537956	CAGE_peak_4_at_UBQLNL_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I005618	5618431	5622267	1.66	[{'connected_gene': 'TRIM34', 'score': 550.77}, {'connected_gene': 'TRIM5', 'score': 17.44}, {'connected_gene': 'UBQLNL', 'score': 14.83}, {'connected_gene': 'ENSG00000239920', 'score': 14.0}, {'connected_gene': 'HBG2', 'score': 11.91}, {'connected_gene': 'TRIM6', 'score': 11.54}, {'connected_gene': 'TRIM22', 'score': 10.99}, {'connected_gene': 'TRIM6-TRIM34', 'score': 0.34}, {'connected_gene': 'GC11P005579', 'score': 0.26}]
chr11	GH11I005504	5504048	5506260	0.9	[{'connected_gene': 'HBE1', 'score': 550.77}, {'connected_gene': 'OR51B5', 'score': 550.77}, {'connected_gene': 'ENSG00000167355', 'score': 550.77}, {'connected_gene': 'FAM160A2', 'score': 22.96}, {'connected_gene': 'DNHD1', 'score': 13.29}, {'connected_gene': 'TRIM34', 'score': 10.03}, {'connected_gene': 'UBQLNL', 'score': 6.05}, {'connected_gene': 'OR52D1', 'score': 0.37}, {'connected_gene': 'HBG2', 'score': 0.11}]
chr11	GH11I005518	5518475	5518605	0.38	[{'connected_gene': 'UBQLNL', 'score': 611.81}, {'connected_gene': 'UBQLN3', 'score': 57.06}, {'connected_gene': 'OLFM5P', 'score': 0.44}, {'connected_gene': 'HBG2', 'score': 0.13}]
chr11	GH11I005516	5516689	5516748	0.5	[{'connected_gene': 'UBQLNL', 'score': 550.77}, {'connected_gene': 'UBQLN3', 'score': 0.44}, {'connected_gene': 'OLFM5P', 'score': 0.44}, {'connected_gene': 'HBG2', 'score': 0.13}]