PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000471646	[[30692199, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30721793, 30722314]]	[[30693075, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30721793, 30721896]]
ENST00000341843	[[30692862, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30726004, 30726065]]	[[30693075, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30726004, 30726065]]
ENST00000452278	[[30692862, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30726004, 30726231], [30728806, 30728900], [30739559, 30739679]]	[[30726220, 30726231], [30728806, 30728900], [30739559, 30739649]]
ENST00000348438	[[30692862, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30728806, 30728900], [30739559, 30739719]]	[[30693075, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30728806, 30728900], [30739559, 30739649]]
ENST00000506074	[[30693075, 30693216], [30694313, 30694497], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30721793, 30721896]]	[[30694479, 30694497], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30721793, 30721896]]
ENST00000423776	[[30721835, 30721948], [30726004, 30726231], [30728806, 30728900], [30739559, 30739661]]	[[30726220, 30726231], [30728806, 30728900], [30739559, 30739649]]
ENST00000445981	[[30721835, 30721948], [30728806, 30728900], [30739559, 30739661]]	[[30721835, 30721948], [30728806, 30728900], [30739559, 30739649]]
ENST00000462882	[[30726023, 30726231], [30728429, 30728624], [30728806, 30728900], [30739559, 30739745]]	None
NM_001202483	[[30691558, 30693216], [30694313, 30694424], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30721793, 30722141]]	[[30694355, 30694424], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30721793, 30721896]]
NM_001883	[[30691558, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30721793, 30722141]]	[[30693075, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30721793, 30721896]]
NM_001202482	[[30691558, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705252], [30706843, 30706929], [30721530, 30721656], [30721793, 30722141]]	[[30693075, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705252], [30706843, 30706929], [30721530, 30721656], [30721793, 30721896]]
NM_001202481	[[30691558, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30726004, 30726231], [30728806, 30728900], [30739559, 30739719]]	[[30693075, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30726004, 30726065]]
NM_001202475	[[30691558, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30728806, 30728900], [30739559, 30739719]]	[[30693075, 30693216], [30694654, 30694696], [30695195, 30695331], [30695542, 30695628], [30700188, 30700261], [30701771, 30701832], [30702309, 30702463], [30704685, 30704803], [30705145, 30705255], [30706843, 30706929], [30721530, 30721656], [30728806, 30728900], [30739559, 30739649]]

Promoter

Chrom	Start	End	Description
chr7	30722064	30722077	CAGE_peak_2_at_CRHR2_5end
chr7	30722089	30722114	CAGE_peak_1_at_CRHR2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I030814	30814595	30817832	0.71	[{'connected_gene': 'MINDY4', 'score': 18.22}, {'connected_gene': 'ENSG00000250424', 'score': 11.28}, {'connected_gene': 'AQP1', 'score': 11.16}, {'connected_gene': 'CRHR2', 'score': 5.48}, {'connected_gene': 'ENSG00000229263', 'score': 0.39}, {'connected_gene': 'GC07M030827', 'score': 0.39}, {'connected_gene': 'INMT-MINDY4', 'score': 0.21}]
chr7	GH07I030755	30755261	30758005	0.94	[{'connected_gene': 'MINDY4', 'score': 19.7}, {'connected_gene': 'CRHR2', 'score': 11.27}, {'connected_gene': 'INMT', 'score': 9.16}, {'connected_gene': 'INMT-MINDY4', 'score': 0.77}]
chr7	GH07I030737	30737923	30739017	0.38	[{'connected_gene': 'MINDY4', 'score': 18.02}, {'connected_gene': 'CRHR2', 'score': 15.87}, {'connected_gene': 'ENSG00000223419', 'score': 0.77}, {'connected_gene': 'LOC105375219', 'score': 0.39}, {'connected_gene': 'LOC105375220', 'score': 0.26}, {'connected_gene': 'INMT', 'score': 0.26}]
chr7	GH07I030740	30740400	30740754	0.96	[{'connected_gene': 'MINDY4', 'score': 19.3}, {'connected_gene': 'CRHR2', 'score': 11.55}, {'connected_gene': 'ENSG00000223419', 'score': 0.77}, {'connected_gene': 'LOC105375219', 'score': 0.39}, {'connected_gene': 'LOC105375220', 'score': 0.26}, {'connected_gene': 'INMT', 'score': 0.26}]
chr7	GH07I030693	30693819	30695420	0.52	[{'connected_gene': 'MINDY4', 'score': 9.9}, {'connected_gene': 'INMT', 'score': 0.77}, {'connected_gene': 'GC07P030686', 'score': 0.44}, {'connected_gene': 'CRHR2', 'score': 0.44}]
chr7	GH07I030993	30993701	30994081	0.71	[{'connected_gene': 'CRHR2', 'score': 2.22}, {'connected_gene': 'MINDY4', 'score': 1.24}, {'connected_gene': 'LOC105375221', 'score': 0.44}, {'connected_gene': 'LOC105375222', 'score': 0.39}]
chr7	GH07I030767	30767019	30768399	0.31	[{'connected_gene': 'CRHR2', 'score': 10.35}, {'connected_gene': 'INMT', 'score': 5.5}, {'connected_gene': 'MINDY4', 'score': 0.77}, {'connected_gene': 'INMT-MINDY4', 'score': 0.37}]
chr7	GH07I030700	30700265	30700414	0.31	[{'connected_gene': 'CRHR2', 'score': 550.77}, {'connected_gene': 'LOC105375220', 'score': 0.77}, {'connected_gene': 'INMT', 'score': 0.77}, {'connected_gene': 'LOC105375219', 'score': 0.31}]
chr7	GH07I030681	30681153	30683097	1.22	[{'connected_gene': 'CRHR2', 'score': 550.37}, {'connected_gene': 'ENSG00000244480', 'score': 4.6}, {'connected_gene': 'GC07P030686', 'score': 0.77}, {'connected_gene': 'PIR57163', 'score': 0.18}]
chr7	GH07I030748	30748269	30754061	1.5	[{'connected_gene': 'INMT', 'score': 559.27}, {'connected_gene': 'INMT-MINDY4', 'score': 550.77}, {'connected_gene': 'MINDY4', 'score': 28.58}, {'connected_gene': 'CRHR2', 'score': 10.67}, {'connected_gene': 'ENSG00000244480', 'score': 4.68}, {'connected_gene': 'ENSG00000223419', 'score': 0.44}, {'connected_gene': 'LOC105375220', 'score': 0.23}]
chr7	GH07I030726	30726391	30728203	1.04	[{'connected_gene': 'LOC105375219', 'score': 550.77}, {'connected_gene': 'CRHR2', 'score': 27.64}, {'connected_gene': 'ENSG00000264520', 'score': 22.61}, {'connected_gene': 'PLEKHA8', 'score': 21.81}, {'connected_gene': 'FKBP14', 'score': 13.07}, {'connected_gene': 'ENSG00000226874', 'score': 9.78}, {'connected_gene': 'ENSG00000223419', 'score': 0.37}, {'connected_gene': 'LOC105375220', 'score': 0.31}, {'connected_gene': 'INMT', 'score': 0.31}]
chr7	GH07I030593	30593344	30598963	2.31	[{'connected_gene': 'ENSG00000196295', 'score': 622.52}, {'connected_gene': 'GARS', 'score': 550.77}, {'connected_gene': 'GC07M030589', 'score': 550.77}, {'connected_gene': 'ZNRF2P2', 'score': 15.84}, {'connected_gene': 'ENSG00000244480', 'score': 13.74}, {'connected_gene': 'FKBP14', 'score': 13.06}, {'connected_gene': 'ENSG00000264520', 'score': 11.01}, {'connected_gene': 'PLEKHA8', 'score': 10.34}, {'connected_gene': 'CRHR2', 'score': 5.01}, {'connected_gene': 'PIR57163', 'score': 0.77}]
chr7	GH07I030688	30688386	30689457	0.38	[{'connected_gene': 'ENSG00000196295', 'score': 15.18}, {'connected_gene': 'CRHR2', 'score': 4.98}, {'connected_gene': 'ENSG00000244480', 'score': 4.58}, {'connected_gene': 'ENSG00000226874', 'score': 4.45}, {'connected_gene': 'GC07P030686', 'score': 0.77}, {'connected_gene': 'INMT', 'score': 0.44}]
chr7	GH07I030851	30851520	30853763	0.6	[{'connected_gene': 'ENSG00000250424', 'score': 550.77}, {'connected_gene': 'INMT', 'score': 4.6}, {'connected_gene': 'CRHR2', 'score': 4.42}, {'connected_gene': 'PIR34848', 'score': 0.28}, {'connected_gene': 'MINDY4', 'score': 0.18}, {'connected_gene': 'INMT-MINDY4', 'score': 0.15}]