PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000274368	[[76248537, 76249040], [76249425, 76249519], [76249853, 76250011], [76251477, 76251688], [76254565, 76254714], [76259167, 76259285], [76264552, 76265299]]	[[76248959, 76249040], [76249425, 76249519], [76249853, 76250011], [76251477, 76251688], [76254565, 76254714], [76259167, 76259285], [76264552, 76264710]]
ENST00000506501	[[76248873, 76249040], [76249425, 76249519], [76249853, 76250011], [76251477, 76251688], [76254565, 76254847]]	[[76248959, 76249040], [76249425, 76249519], [76249853, 76250011], [76251477, 76251688], [76254565, 76254738]]
ENST00000512446	[[76249241, 76249519], [76249853, 76250011], [76251477, 76251688], [76254565, 76254669]]	None
ENST00000514258	[[76254521, 76254714], [76259167, 76259285], [76272189, 76272345], [76276785, 76276983]]	None
ENST00000503763	[[76259059, 76259285], [76264552, 76264781]]	None
NM_001882	[[76248679, 76249040], [76249425, 76249519], [76249853, 76250011], [76251477, 76251688], [76254565, 76254714], [76259167, 76259285], [76264552, 76265299]]	[[76248959, 76249040], [76249425, 76249519], [76249853, 76250011], [76251477, 76251688], [76254565, 76254714], [76259167, 76259285], [76264552, 76264710]]

Promoter

Chrom	Start	End	Description
chr5	76248681	76248690	CAGE_peak_5_at_CRHBP_5end
chr5	76248797	76248808	CAGE_peak_3_at_CRHBP_5end
chr5	76248833	76248836	CAGE_peak_9_at_CRHBP_5end
chr5	76248861	76248877	CAGE_peak_1_at_CRHBP_5end
chr5	76248878	76248889	CAGE_peak_4_at_CRHBP_5end
chr5	76249436	76249479	CAGE_peak_2_at_CRHBP_5end
chr5	76249493	76249508	CAGE_peak_6_at_CRHBP_5end
chr5	76254428	76254466	CAGE_peak_7_at_CRHBP_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I077029	77029440	77031902	2.06	[{'connected_gene': 'AGGF1', 'score': 556.35}, {'connected_gene': 'ENSG00000250615', 'score': 10.83}, {'connected_gene': 'SNORA47', 'score': 10.63}, {'connected_gene': 'ZBED3-AS1', 'score': 10.6}, {'connected_gene': 'CRHBP', 'score': 10.31}]
chr5	GH05I076830	76830588	76832112	1.1	[{'connected_gene': 'F2RL1', 'score': 39.77}, {'connected_gene': 'ALDH7A1P1', 'score': 16.15}, {'connected_gene': 'ENSG00000225407', 'score': 11.11}, {'connected_gene': 'F2R', 'score': 11.11}, {'connected_gene': 'RNU6ATAC36P', 'score': 10.99}, {'connected_gene': 'CRHBP', 'score': 10.99}, {'connected_gene': 'RN7SL208P', 'score': 0.44}, {'connected_gene': 'GC05P076819', 'score': 0.39}, {'connected_gene': 'GC05P076820', 'score': 0.39}, {'connected_gene': 'GC05P076755', 'score': 0.18}]
chr5	GH05I076804	76804007	76809780	1.65	[{'connected_gene': 'F2RL1', 'score': 42.01}, {'connected_gene': 'ENSG00000225407', 'score': 10.83}, {'connected_gene': 'F2R', 'score': 10.83}, {'connected_gene': 'CRHBP', 'score': 10.11}, {'connected_gene': 'ENSG00000250615', 'score': 9.34}, {'connected_gene': 'GC05P076755', 'score': 0.23}]
chr5	GH05I076793	76793414	76793963	0.2	[{'connected_gene': 'F2RL1', 'score': 15.41}, {'connected_gene': 'ENSG00000225407', 'score': 11.06}, {'connected_gene': 'F2R', 'score': 11.06}, {'connected_gene': 'CRHBP', 'score': 10.67}, {'connected_gene': 'GC05P076755', 'score': 0.28}]
chr5	GH05I076794	76794441	76795402	0.89	[{'connected_gene': 'F2RL1', 'score': 15.87}, {'connected_gene': 'ENSG00000225407', 'score': 11.06}, {'connected_gene': 'F2R', 'score': 11.06}, {'connected_gene': 'CRHBP', 'score': 10.67}, {'connected_gene': 'GC05P076755', 'score': 0.28}]
chr5	GH05I076810	76810566	76811574	0.8	[{'connected_gene': 'F2RL1', 'score': 40.17}, {'connected_gene': 'ENSG00000225407', 'score': 10.71}, {'connected_gene': 'F2R', 'score': 10.7}, {'connected_gene': 'CRHBP', 'score': 10.1}, {'connected_gene': 'GC05P076755', 'score': 0.22}]
chr5	GH05I076786	76786872	76792622	1.65	[{'connected_gene': 'F2RL1', 'score': 28.15}, {'connected_gene': 'F2R', 'score': 22.98}, {'connected_gene': 'ENSG00000225407', 'score': 11.07}, {'connected_gene': 'CRHBP', 'score': 10.66}, {'connected_gene': 'GC05P076755', 'score': 0.29}]
chr5	GH05I076687	76687587	76693813	1.16	[{'connected_gene': 'F2R', 'score': 18.63}, {'connected_gene': 'ENSG00000225407', 'score': 11.63}, {'connected_gene': 'LOC101929109', 'score': 10.51}, {'connected_gene': 'IQGAP2', 'score': 10.39}, {'connected_gene': 'RNU6ATAC36P', 'score': 9.85}, {'connected_gene': 'CRHBP', 'score': 9.85}, {'connected_gene': 'F2RL1', 'score': 6.72}, {'connected_gene': 'ENSG00000277188', 'score': 0.34}, {'connected_gene': 'F2RL2', 'score': 0.2}]
chr5	GH05I076868	76868001	76868201	0.73	[{'connected_gene': 'CRHBP', 'score': 17.96}, {'connected_gene': 'ZBED3-AS1', 'score': 10.29}, {'connected_gene': 'SNORA47', 'score': 10.29}, {'connected_gene': 'ENSG00000225407', 'score': 9.9}, {'connected_gene': 'F2R', 'score': 9.9}, {'connected_gene': 'S100Z', 'score': 0.37}, {'connected_gene': 'PIR54977', 'score': 0.31}, {'connected_gene': 'GC05P076755', 'score': 0.14}]
chr5	GH05I076869	76868216	76868365	0.71	[{'connected_gene': 'CRHBP', 'score': 16.63}, {'connected_gene': 'ZBED3-AS1', 'score': 10.29}, {'connected_gene': 'SNORA47', 'score': 10.29}, {'connected_gene': 'ENSG00000225407', 'score': 9.9}, {'connected_gene': 'F2R', 'score': 9.9}, {'connected_gene': 'S100Z', 'score': 0.37}, {'connected_gene': 'PIR54977', 'score': 0.31}, {'connected_gene': 'GC05P076755', 'score': 0.14}]
chr5	GH05I076874	76874116	76874385	0.82	[{'connected_gene': 'CRHBP', 'score': 9.83}, {'connected_gene': 'S100Z', 'score': 0.34}, {'connected_gene': 'PIR54977', 'score': 0.34}, {'connected_gene': 'GC05P076755', 'score': 0.13}]
chr5	GH05I076875	76875201	76875800	0.69	[{'connected_gene': 'CRHBP', 'score': 9.75}, {'connected_gene': 'PIR54977', 'score': 0.37}, {'connected_gene': 'S100Z', 'score': 0.31}, {'connected_gene': 'GC05P076755', 'score': 0.13}]
chr5	GH05I076943	76943073	76943362	0.2	[{'connected_gene': 'CRHBP', 'score': 37.24}, {'connected_gene': 'RNU6ATAC36P', 'score': 0.44}, {'connected_gene': 'PIR54977', 'score': 0.25}, {'connected_gene': 'S100Z', 'score': 0.16}]
chr5	GH05I076951	76951179	76952538	0.38	[{'connected_gene': 'CRHBP', 'score': 550.77}, {'connected_gene': 'RNU6ATAC36P', 'score': 0.77}, {'connected_gene': 'S100Z', 'score': 0.15}]
chr5	GH05I076956	76956107	76957367	0.31	[{'connected_gene': 'CRHBP', 'score': 16.01}, {'connected_gene': 'LOC105379043', 'score': 0.31}]
chr5	GH05I076957	76957788	76961282	1.17	[{'connected_gene': 'CRHBP', 'score': 0.44}, {'connected_gene': 'LOC105379043', 'score': 0.34}]
chr5	GH05I076952	76952950	76954849	1.26	[{'connected_gene': 'CRHBP', 'score': 565.66}, {'connected_gene': 'LOC105379043', 'score': 0.31}]
chr5	GH05I076836	76836637	76840936	1.15	[{'connected_gene': 'RN7SL208P', 'score': 550.77}, {'connected_gene': 'F2RL1', 'score': 39.93}, {'connected_gene': 'F2R', 'score': 17.25}, {'connected_gene': 'ENSG00000225407', 'score': 11.11}, {'connected_gene': 'CRHBP', 'score': 11.0}, {'connected_gene': 'RNU6ATAC36P', 'score': 11.0}, {'connected_gene': 'S100Z', 'score': 0.39}, {'connected_gene': 'GC05P076755', 'score': 0.18}]