PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000296776	[[72469021, 72469696], [72469886, 72470970]]	[[72469070, 72469696], [72469886, 72469992]]
ENST00000511737	[[72469118, 72469543], [72470849, 72470885]]	None
NM_153217	[[72469022, 72469696], [72469886, 72470970]]	[[72469070, 72469696], [72469886, 72469992]]

Promoter

Chrom	Start	End	Description
chr5	72469014	72469029	CAGE_peak_1_at_TMEM174_5end
chr5	72469032	72469043	CAGE_peak_2_at_TMEM174_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I073215	73215519	73216809	1.47	[{'connected_gene': 'ANKRA2', 'score': 19.14}, {'connected_gene': 'TMEM174', 'score': 11.14}, {'connected_gene': 'LINC01386', 'score': 10.44}, {'connected_gene': 'TNPO1', 'score': 10.05}, {'connected_gene': 'FOXD1', 'score': 1.89}, {'connected_gene': 'ENSG00000249743', 'score': 0.77}, {'connected_gene': 'LOC105379031', 'score': 0.22}]
chr5	GH05I073201	73201601	73202454	1.04	[{'connected_gene': 'LOC340090', 'score': 550.77}, {'connected_gene': 'ANKRA2', 'score': 15.88}, {'connected_gene': 'UTP15', 'score': 12.08}, {'connected_gene': 'TMEM174', 'score': 11.87}, {'connected_gene': 'TMEM171', 'score': 10.66}, {'connected_gene': 'TNPO1', 'score': 10.18}, {'connected_gene': 'LINC01386', 'score': 9.94}, {'connected_gene': 'ENSG00000249743', 'score': 0.39}]
chr5	GH05I073173	73173147	73173206	0.61	[{'connected_gene': 'TMEM174', 'score': 550.77}, {'connected_gene': 'LOC101060067', 'score': 0.37}]
chr5	GH05I073181	73181923	73184677	0.54	[{'connected_gene': 'TMEM171', 'score': 10.66}, {'connected_gene': 'UTP15', 'score': 5.11}, {'connected_gene': 'TMEM174', 'score': 0.39}, {'connected_gene': 'LOC340090', 'score': 0.37}]
chr5	GH05I073083	73083194	73083343	0.64	[{'connected_gene': 'TMEM171', 'score': 11.57}, {'connected_gene': 'TMEM174', 'score': 10.86}, {'connected_gene': 'GC05P073101', 'score': 0.37}, {'connected_gene': 'LOC728549', 'score': 0.21}, {'connected_gene': 'FCHO2', 'score': 0.13}]
chr5	GH05I073122	73122149	73123690	0.86	[{'connected_gene': 'TMEM171', 'score': 11.22}, {'connected_gene': 'TMEM174', 'score': 10.89}, {'connected_gene': 'FCHO2', 'score': 5.86}, {'connected_gene': 'GC05P073146', 'score': 0.34}]
chr5	GH05I073094	73094074	73094223	0.54	[{'connected_gene': 'TMEM171', 'score': 11.17}, {'connected_gene': 'TMEM174', 'score': 10.15}, {'connected_gene': 'LINC01386', 'score': 10.02}, {'connected_gene': 'GC05P073101', 'score': 0.44}, {'connected_gene': 'GC05M073090', 'score': 0.34}, {'connected_gene': 'LOC728549', 'score': 0.19}]
chr5	GH05I073187	73187995	73190449	0.9	[{'connected_gene': 'TMEM171', 'score': 10.74}, {'connected_gene': 'LINC01386', 'score': 9.98}, {'connected_gene': 'ENSG00000184084', 'score': 4.3}, {'connected_gene': 'LOC340090', 'score': 0.39}, {'connected_gene': 'TMEM174', 'score': 0.37}]
chr5	GH05I073160	73160314	73160403	0.78	[{'connected_gene': 'TMEM171', 'score': 10.56}, {'connected_gene': 'LOC101060067', 'score': 0.44}, {'connected_gene': 'TMEM174', 'score': 0.39}]