PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000342382	[[34929697, 34930021], [34933919, 34934013], [34935814, 34935938], [34936248, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945865, 34945908], [34950274, 34950447], [34954030, 34954106], [34954657, 34955305]]	[[34929924, 34930021], [34933919, 34934013], [34935814, 34935938], [34936248, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945865, 34945908], [34950274, 34950447], [34954030, 34954106], [34954657, 34954819]]
ENST00000303525	[[34929697, 34930021], [34933919, 34934013], [34935814, 34935938], [34936248, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945826, 34945908], [34950274, 34950447], [34954030, 34954106], [34954657, 34959068]]	[[34929924, 34930021], [34933919, 34934013], [34935814, 34935938], [34936248, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945826, 34945908], [34950274, 34950447], [34954030, 34954106], [34954657, 34954819]]
ENST00000382021	[[34929697, 34930021], [34933919, 34934013], [34935814, 34935938], [34936248, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945865, 34945908], [34949647, 34949782], [34950274, 34950447], [34954030, 34954106], [34954657, 34959069]]	[[34929924, 34930021], [34933919, 34934013], [34935814, 34935938], [34936248, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945865, 34945908], [34949647, 34949782], [34950274, 34950447], [34954030, 34954106], [34954657, 34954819]]
ENST00000514237	[[34936308, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945826, 34945908], [34950274, 34950447], [34954030, 34954046]]	None
ENST00000512136	[[34945865, 34945908], [34950274, 34950447], [34950548, 34952848]]	None
ENST00000506762	[[34950311, 34950447], [34954030, 34954296]]	None
ENST00000509626	[[34953630, 34954106], [34954657, 34954960]]	None
NM_001012339	[[34929697, 34930021], [34933919, 34934013], [34935814, 34935938], [34936248, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945865, 34945908], [34950274, 34950447], [34954030, 34954106], [34954657, 34959069]]	[[34929924, 34930021], [34933919, 34934013], [34935814, 34935938], [34936248, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945865, 34945908], [34950274, 34950447], [34954030, 34954106], [34954657, 34954819]]
NM_194283	[[34929697, 34930021], [34933919, 34934013], [34935814, 34935938], [34936248, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945865, 34945908], [34949647, 34949782], [34950274, 34950447], [34954030, 34954106], [34954657, 34959069]]	[[34929924, 34930021], [34933919, 34934013], [34935814, 34935938], [34936248, 34936371], [34937430, 34937735], [34938962, 34939114], [34941200, 34941288], [34944971, 34945130], [34945865, 34945908], [34949647, 34949782], [34950274, 34950447], [34954030, 34954106], [34954657, 34954819]]

Promoter

Chrom	Start	End	Description
chr5	34929629	34929671	CAGE_peak_2_at_DNAJC21_5end
chr5	34929677	34929789	CAGE_peak_1_at_DNAJC21_5end
chr5	34929947	34930005	CAGE_peak_3_at_DNAJC21_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I035046	35046097	35049358	0.57	[{'connected_gene': 'AGXT2', 'score': 550.77}, {'connected_gene': 'DNAJC21', 'score': 4.35}, {'connected_gene': 'PRLR', 'score': 0.09}]
chr5	GH05I035026	35026576	35026725	0.62	[{'connected_gene': 'AGXT2', 'score': 11.79}, {'connected_gene': 'DNAJC21', 'score': 0.15}]
chr5	GH05I035022	35022928	35024205	0.57	[{'connected_gene': 'RAD1', 'score': 13.06}, {'connected_gene': 'AGXT2', 'score': 11.79}, {'connected_gene': 'DNAJC21', 'score': 0.16}]
chr5	GH05I034913	34913676	34918084	2.1	[{'connected_gene': 'BRIX1', 'score': 550.77}, {'connected_gene': 'RAD1', 'score': 550.77}, {'connected_gene': 'DNAJC21', 'score': 18.7}, {'connected_gene': 'TTC23L', 'score': 9.85}, {'connected_gene': 'GC05P034888', 'score': 0.31}]
chr5	GH05I034006	34006415	34010897	2.54	[{'connected_gene': 'AMACR', 'score': 653.55}, {'connected_gene': 'ENSG00000249572', 'score': 12.53}, {'connected_gene': 'BRIX1', 'score': 11.8}, {'connected_gene': 'TTC23L', 'score': 10.75}, {'connected_gene': 'LOC643373', 'score': 10.41}, {'connected_gene': 'DNAJC21', 'score': 9.76}, {'connected_gene': 'C1QTNF3', 'score': 2.72}, {'connected_gene': 'C1QTNF3-AMACR', 'score': 0.13}]
chr5	GH05I034928	34928763	34931300	2.01	[{'connected_gene': 'DNAJC21', 'score': 575.53}, {'connected_gene': 'GC05P034888', 'score': 0.26}, {'connected_gene': 'AGXT2', 'score': 0.13}]
chr5	GH05I034922	34922635	34925100	1.17	[{'connected_gene': 'DNAJC21', 'score': 18.74}, {'connected_gene': 'BRIX1', 'score': 15.28}, {'connected_gene': 'LOC643373', 'score': 9.8}, {'connected_gene': 'RAD1', 'score': 0.77}, {'connected_gene': 'GC05P034888', 'score': 0.28}]
chr5	GH05I034863	34863106	34865128	0.38	[{'connected_gene': 'DNAJC21', 'score': 6.77}, {'connected_gene': 'TTC23L', 'score': 4.68}, {'connected_gene': 'ENSG00000250140', 'score': 0.77}, {'connected_gene': 'RPL21P54', 'score': 0.37}]
chr5	GH05I034866	34866628	34868044	0.93	[{'connected_gene': 'DNAJC21', 'score': 6.55}, {'connected_gene': 'ENSG00000250140', 'score': 0.44}, {'connected_gene': 'RPL21P54', 'score': 0.37}, {'connected_gene': 'TTC23L', 'score': 0.31}]
chr5	GH05I034865	34865276	34865425	0.2	[{'connected_gene': 'DNAJC21', 'score': 6.59}, {'connected_gene': 'ENSG00000250140', 'score': 0.77}, {'connected_gene': 'RPL21P54', 'score': 0.37}, {'connected_gene': 'TTC23L', 'score': 0.31}]
chr5	GH05I033929	33929440	33930827	0.54	[{'connected_gene': 'RNU6-923P', 'score': 11.14}, {'connected_gene': 'ADAMTS12', 'score': 11.06}, {'connected_gene': 'DNAJC21', 'score': 4.59}, {'connected_gene': 'RXFP3', 'score': 0.44}, {'connected_gene': 'PIR31924', 'score': 0.34}]
chr5	GH05I034891	34891692	34892462	0.38	[{'connected_gene': 'ENSG00000250234', 'score': 10.73}, {'connected_gene': 'RAI14', 'score': 10.73}, {'connected_gene': 'DNAJC21', 'score': 5.57}, {'connected_gene': 'GC05P034888', 'score': 0.77}, {'connected_gene': 'PIR35041', 'score': 0.39}, {'connected_gene': 'TTC23L', 'score': 0.23}]