PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr4	177116713	177116751	CAGE_peak_1_at_SPATA4_5end
chr4	177116772	177116779	CAGE_peak_2_at_SPATA4_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I176156	176156192	176157192	0.31	[{'connected_gene': 'GPM6A', 'score': 10.04}, {'connected_gene': 'GC04M176150', 'score': 0.77}, {'connected_gene': 'SPATA4', 'score': 0.28}, {'connected_gene': 'GC04M176057', 'score': 0.2}, {'connected_gene': 'WDR17', 'score': 0.16}]
chr4	GH04I176184	176184681	176185883	0.62	[{'connected_gene': 'SPATA4', 'score': 12.82}, {'connected_gene': 'WDR17', 'score': 6.34}, {'connected_gene': 'GC04M176150', 'score': 0.29}, {'connected_gene': 'GC04M176057', 'score': 0.28}]
chr4	GH04I176192	176192483	176196310	1.97	[{'connected_gene': 'SPATA4', 'score': 550.77}, {'connected_gene': 'WDR17', 'score': 4.46}, {'connected_gene': 'GC04M176057', 'score': 0.31}, {'connected_gene': 'GC04M176150', 'score': 0.26}]
chr4	GH04I176186	176186164	176187978	0.43	[{'connected_gene': 'SPATA4', 'score': 0.44}, {'connected_gene': 'GC04M176150', 'score': 0.28}, {'connected_gene': 'GC04M176057', 'score': 0.28}]
chr4	GH04I176654	176654160	176654195	0.22	[{'connected_gene': 'LOC105377555', 'score': 550.77}, {'connected_gene': 'SPATA4', 'score': 40.06}, {'connected_gene': 'GC04P176677', 'score': 0.34}]