PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000375099	[[20512577, 20512646], [20517039, 20522541]]	[[20517054, 20517897]]
NM_152376	[[20512570, 20512646], [20517039, 20522541]]	[[20517054, 20517897]]

Promoter

Chrom	Start	End	Description
chr1	20512133	20512140	CAGE_peak_6_at_UBXN10_5end
chr1	20512568	20512629	CAGE_peak_1_at_UBXN10_5end
chr1	20512630	20512640	CAGE_peak_3_at_UBXN10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I020109	20109772	20111517	0.73	[{'connected_gene': 'PLA2G2F', 'score': 12.08}, {'connected_gene': 'PLA2G2C', 'score': 10.81}, {'connected_gene': 'MUL1', 'score': 9.7}, {'connected_gene': 'UBXN10', 'score': 5.18}, {'connected_gene': 'NBL1', 'score': 2.88}, {'connected_gene': 'PLA2G2D', 'score': 0.44}, {'connected_gene': 'LOC100419911', 'score': 0.19}]
chr1	GH01I020080	20080196	20081713	1.03	[{'connected_gene': 'PLA2G5', 'score': 8.96}, {'connected_gene': 'UBXN10', 'score': 3.46}, {'connected_gene': 'HTR6', 'score': 1.34}, {'connected_gene': 'NBL1', 'score': 1.27}, {'connected_gene': 'PLA2G2D', 'score': 0.28}, {'connected_gene': 'LOC100419911', 'score': 0.26}]
chr1	GH01I020008	20008074	20009408	0.98	[{'connected_gene': 'PLA2G5', 'score': 6.77}, {'connected_gene': 'UBXN10', 'score': 5.65}, {'connected_gene': 'PIR59989', 'score': 0.31}]
chr1	GH01I020180	20179613	20181101	0.74	[{'connected_gene': 'HP1BP3', 'score': 28.36}, {'connected_gene': 'EMC1', 'score': 11.75}, {'connected_gene': 'OTUD3', 'score': 11.28}, {'connected_gene': 'UBXN10', 'score': 0.77}, {'connected_gene': 'PLA2G2C', 'score': 0.77}]
chr1	GH01I020179	20179465	20179589	0.57	[{'connected_gene': 'EMC1', 'score': 11.75}, {'connected_gene': 'OTUD3', 'score': 11.28}, {'connected_gene': 'HP1BP3', 'score': 10.41}, {'connected_gene': 'UBXN10', 'score': 1.94}, {'connected_gene': 'RNF186', 'score': 1.55}, {'connected_gene': 'PLA2G2A', 'score': 1.32}, {'connected_gene': 'PLA2G2C', 'score': 0.77}]
chr1	GH01I020184	20184343	20188151	2.48	[{'connected_gene': 'UBXN10', 'score': 578.52}, {'connected_gene': 'UBXN10-AS1', 'score': 550.77}, {'connected_gene': 'UBR4', 'score': 13.56}, {'connected_gene': 'HP1BP3', 'score': 9.67}]
chr1	GH01I020185	20184048	20184197	0.85	[{'connected_gene': 'UBXN10', 'score': 556.79}, {'connected_gene': 'UBXN10-AS1', 'score': 0.77}]
chr1	GH01I020210	20210448	20213539	1.23	[{'connected_gene': 'LOC105376826', 'score': 550.77}, {'connected_gene': 'CAMK2N1', 'score': 20.67}, {'connected_gene': 'MUL1', 'score': 10.85}, {'connected_gene': 'VWA5B1', 'score': 10.69}, {'connected_gene': 'ENSG00000226664', 'score': 10.41}, {'connected_gene': 'UBXN10', 'score': 10.16}, {'connected_gene': 'LOC105376825', 'score': 0.39}]
chr1	GH01I020198	20198677	20199844	0.92	[{'connected_gene': 'LOC105376825', 'score': 550.77}, {'connected_gene': 'UBXN10', 'score': 12.08}, {'connected_gene': 'LOC105376826', 'score': 0.39}]
chr1	GH01I020195	20195288	20195437	1.01	[{'connected_gene': 'LOC105376825', 'score': 0.77}, {'connected_gene': 'PIR46807', 'score': 0.77}, {'connected_gene': 'UBXN10', 'score': 0.39}]