PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr18	44181300	44181314	CAGE_peak_4_at_LOXHD1_5end
chr18	44181325	44181339	CAGE_peak_6_at_LOXHD1_5end
chr18	44181350	44181385	CAGE_peak_1_at_LOXHD1_5end
chr18	44181390	44181399	CAGE_peak_9_at_LOXHD1_5end
chr18	44181418	44181441	CAGE_peak_3_at_LOXHD1_5end
chr18	44181442	44181462	CAGE_peak_2_at_LOXHD1_5end
chr18	44237177	44237198	CAGE_peak_5_at_LOXHD1_5end
chr18	44237208	44237220	CAGE_peak_7_at_LOXHD1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr18	GH18I046600	46600258	46601885	0.42	[{'connected_gene': 'RNF165', 'score': 4.54}, {'connected_gene': 'LOXHD1', 'score': 3.09}, {'connected_gene': 'GC18M046613', 'score': 0.39}, {'connected_gene': 'GC18P046580', 'score': 0.34}]
chr18	GH18I046658	46658298	46658527	0.77	[{'connected_gene': 'LOXHD1', 'score': 550.77}, {'connected_gene': 'LOC105372096', 'score': 0.77}]
chr18	GH18I046540	46540333	46540679	0.25	[{'connected_gene': 'LOXHD1', 'score': 4.84}, {'connected_gene': 'GC18P046558', 'score': 0.37}, {'connected_gene': 'GC18P046450', 'score': 0.17}]
chr18	GH18I046519	46519067	46519126	0.5	[{'connected_gene': 'LOXHD1', 'score': 550.12}, {'connected_gene': 'GC18P046558', 'score': 0.28}, {'connected_gene': 'GC18P046450', 'score': 0.2}]
chr18	GH18I046661	46661138	46661227	0.52	[{'connected_gene': 'LOC105372096', 'score': 0.77}, {'connected_gene': 'LOXHD1', 'score': 0.77}]
chr18	GH18I046480	46480698	46481047	0.43	[{'connected_gene': 'GC18P046450', 'score': 0.29}, {'connected_gene': 'GC18P046558', 'score': 0.18}, {'connected_gene': 'LOXHD1', 'score': 0.1}]
chr18	GH18I046481	46481178	46481347	0.56	[{'connected_gene': 'GC18P046450', 'score': 0.29}, {'connected_gene': 'GC18P046558', 'score': 0.18}, {'connected_gene': 'LOXHD1', 'score': 0.1}]
chr18	GH18I046482	46480358	46480507	0.31	[{'connected_gene': 'GC18P046450', 'score': 0.31}, {'connected_gene': 'GC18P046558', 'score': 0.18}, {'connected_gene': 'LOXHD1', 'score': 0.1}]
chr18	GH18I046559	46559291	46559350	0.5	[{'connected_gene': 'GC18P046558', 'score': 550.77}, {'connected_gene': 'LOXHD1', 'score': 550.15}, {'connected_gene': 'GC18P046580', 'score': 0.34}]
chr18	GH18I046623	46623409	46623938	0.51	[{'connected_gene': 'GC18M046613', 'score': 0.44}, {'connected_gene': 'LOXHD1', 'score': 0.29}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000398722	[[44056935, 44057183], [44057616, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44139410, 44139565], [44140045, 44140508], [44143027, 44143188], [44146219, 44146412], [44149404, 44149601], [44152048, 44152125], [44157669, 44157830], [44159592, 44159747], [44171895, 44172031], [44172460, 44172547], [44173562, 44173723], [44174293, 44174429], [44181179, 44181479]]	[[44057145, 44057183], [44057616, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44139410, 44139565], [44140045, 44140508], [44143027, 44143188], [44146219, 44146412], [44149404, 44149601], [44152048, 44152125], [44157669, 44157830], [44159592, 44159747], [44171895, 44172031], [44172460, 44172547], [44173562, 44173723], [44174293, 44174429], [44181179, 44181479]]
ENST00000536736	[[44057222, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44139410, 44139565], [44140045, 44140508], [44143027, 44143188], [44146219, 44146412], [44149404, 44149601], [44152048, 44152125], [44157669, 44157830], [44159592, 44159747], [44171895, 44172031], [44172460, 44172547], [44173562, 44173723], [44174293, 44174429], [44181179, 44181430], [44184068, 44184192], [44190738, 44190887], [44198154, 44198253], [44219578, 44219763], [44221918, 44221999], [44229117, 44229232], [44236866, 44236996]]	[[44057434, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44139410, 44139565], [44140045, 44140508], [44143027, 44143188], [44146219, 44146412], [44149404, 44149601], [44152048, 44152125], [44157669, 44157830], [44159592, 44159747], [44171895, 44172031], [44172460, 44172547], [44173562, 44173723], [44174293, 44174429], [44181179, 44181430], [44184068, 44184192], [44190738, 44190887], [44198154, 44198253], [44219578, 44219763], [44221918, 44221999], [44229117, 44229232], [44236866, 44236996]]
ENST00000441551	[[44057412, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44143027, 44143188], [44146219, 44146412], [44149404, 44149601], [44152048, 44152125], [44157669, 44157830], [44159592, 44159747], [44171895, 44172031], [44172460, 44172547], [44173562, 44173723], [44174293, 44174429], [44181179, 44181430], [44184068, 44184192], [44190738, 44190887], [44198154, 44198253], [44219578, 44219763], [44221918, 44221999], [44229117, 44229232], [44236866, 44236996]]	[[44057434, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44143027, 44143188], [44146219, 44146412], [44149404, 44149601], [44152048, 44152125], [44157669, 44157830], [44159592, 44159747], [44171895, 44172031], [44172460, 44172547], [44173562, 44173723], [44174293, 44174429], [44181179, 44181430], [44184068, 44184192], [44190738, 44190887], [44198154, 44198253], [44219578, 44219763], [44221918, 44221999], [44229117, 44229232], [44236866, 44236996]]
ENST00000335730	[[44089529, 44089778], [44098091, 44098219], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44139410, 44139565], [44140045, 44140508], [44143027, 44143188], [44146219, 44146412], [44149404, 44149601], [44152048, 44152125], [44157669, 44157830], [44159592, 44159747], [44171895, 44172031], [44172460, 44172547], [44173562, 44173723], [44174293, 44174429], [44181179, 44181626]]	None
ENST00000300591	[[44056934, 44057183], [44057616, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44137864, 44138018], [44139132, 44139275]]	[[44057145, 44057183], [44057616, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137335]]
ENST00000398705	[[44056935, 44057183], [44057602, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44098841, 44099034]]	[[44057180, 44057183], [44057602, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098207]]
ENST00000579038	[[44056935, 44057183], [44057602, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44136652, 44136732]]	[[44057180, 44057183], [44057602, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122816]]
ENST00000441893	[[44057222, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44139132, 44139255]]	[[44057434, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44139132, 44139147]]
ENST00000582408	[[44057222, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44139132, 44139255]]	[[44057434, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137335]]
ENST00000398686	[[44057235, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44098841, 44099049]]	[[44057434, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098207]]
ENST00000414184	[[44085854, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44100539, 44100661]]	[[44085854, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098207]]
ENST00000452425	[[44089774, 44089778], [44098091, 44098219], [44100260, 44100688]]	[[44089774, 44089778], [44098091, 44098219], [44100260, 44100299]]
ENST00000536111	[[44109262, 44109294], [44113124, 44113287], [44113668, 44113722], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44135087, 44135334]]	[[44113719, 44113722], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44135087, 44135143]]
ENST00000419859	[[44126969, 44127021], [44137318, 44137452], [44137864, 44138018], [44139036, 44139252]]	[[44126969, 44127021], [44137318, 44137335]]
NM_144612	[[44057216, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44139410, 44139565], [44140045, 44140508], [44143027, 44143188], [44146219, 44146412], [44149404, 44149601], [44152048, 44152125], [44157669, 44157830], [44159592, 44159747], [44171895, 44172031], [44172460, 44172547], [44173562, 44173723], [44174293, 44174429], [44181179, 44181430], [44184068, 44184192], [44190738, 44190887], [44198154, 44198253], [44219578, 44219763], [44221918, 44221999], [44229117, 44229232], [44236866, 44236996]]	[[44057434, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44139410, 44139565], [44140045, 44140508], [44143027, 44143188], [44146219, 44146412], [44149404, 44149601], [44152048, 44152125], [44157669, 44157830], [44159592, 44159747], [44171895, 44172031], [44172460, 44172547], [44173562, 44173723], [44174293, 44174429], [44181179, 44181430], [44184068, 44184192], [44190738, 44190887], [44198154, 44198253], [44219578, 44219763], [44221918, 44221999], [44229117, 44229232], [44236866, 44236996]]
NM_001173129	[[44056934, 44057183], [44057602, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44098841, 44099049]]	[[44057180, 44057183], [44057602, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098207]]
NM_001308013	[[44056934, 44057183], [44057602, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44136652, 44136732]]	[[44057180, 44057183], [44057602, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122816]]
NM_001145472	[[44056934, 44057183], [44057616, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137452], [44137864, 44138018], [44139132, 44139270]]	[[44057145, 44057183], [44057616, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44101059, 44101245], [44102063, 44102272], [44104428, 44104564], [44104670, 44104880], [44109139, 44109294], [44113124, 44113287], [44114297, 44114414], [44118118, 44118300], [44121738, 44121903], [44122689, 44122818], [44125279, 44125384], [44126857, 44127021], [44137318, 44137335]]
NM_001145473	[[44057216, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098219], [44098841, 44099049]]	[[44057434, 44057915], [44063549, 44063708], [44064981, 44065114], [44068934, 44069105], [44085800, 44085986], [44087500, 44087675], [44089660, 44089778], [44098091, 44098207]]