PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000569739	[[2028917, 2029350], [2029425, 2029645]]	None
ENST00000356120	[[2028917, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030656, 2030732], [2030939, 2031020], [2031114, 2031468]]	[[2029052, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030656, 2030732], [2030939, 2031020], [2031114, 2031180]]
ENST00000354249	[[2028917, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030656, 2030729], [2030939, 2031020], [2031114, 2031550]]	[[2029052, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030656, 2030729], [2030939, 2031020], [2031114, 2031180]]
ENST00000397280	[[2029040, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030641, 2030732], [2030939, 2031020], [2031114, 2031184]]	[[2029052, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030641, 2030732], [2030939, 2031020], [2031114, 2031180]]
ENST00000566005	[[2029040, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030641, 2030729], [2030939, 2031020], [2031114, 2031184]]	[[2029052, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030641, 2030729], [2030939, 2031020], [2031114, 2031180]]
ENST00000563181	[[2030060, 2030182], [2030367, 2031020], [2031114, 2031445]]	None
ENST00000567471	[[2030540, 2030545], [2030656, 2030732], [2030939, 2031020], [2031114, 2031416], [2032660, 2032752], [2034167, 2034193]]	[[2030540, 2030545], [2030656, 2030732], [2030939, 2031020], [2031114, 2031180]]
NM_172168	[[2028917, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030641, 2030732], [2030939, 2031020], [2031114, 2031550]]	[[2029052, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030641, 2030732], [2030939, 2031020], [2031114, 2031180]]
NM_172167	[[2028917, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030656, 2030732], [2030939, 2031020], [2031114, 2031550]]	[[2029052, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030656, 2030732], [2030939, 2031020], [2031114, 2031180]]
NM_001267721	[[2028917, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030641, 2030729], [2030939, 2031020], [2031114, 2031550]]	[[2029052, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030641, 2030729], [2030939, 2031020], [2031114, 2031180]]
NM_144603	[[2028917, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030656, 2030729], [2030939, 2031020], [2031114, 2031550]]	[[2029052, 2029350], [2029425, 2029543], [2029790, 2029904], [2029997, 2030182], [2030367, 2030545], [2030656, 2030729], [2030939, 2031020], [2031114, 2031180]]

Promoter

Chrom	Start	End	Description
chr16	2031433	2031447	CAGE_peak_2_at_NOXO1_5end
chr16	2031464	2031475	CAGE_peak_1_at_NOXO1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I001990	1989460	1989469	0.72	[{'connected_gene': 'SYNGR3', 'score': 550.77}, {'connected_gene': 'ENSG00000261790', 'score': 550.77}, {'connected_gene': 'NOXO1', 'score': 0.44}]
chr16	GH16I001982	1982829	1986144	2.24	[{'connected_gene': 'GFER', 'score': 563.94}, {'connected_gene': 'NOXO1', 'score': 550.77}, {'connected_gene': 'ENSG00000255513', 'score': 18.63}, {'connected_gene': 'ENSG00000261505', 'score': 14.77}, {'connected_gene': 'SRRM2', 'score': 13.26}, {'connected_gene': 'LOC105371055', 'score': 12.95}, {'connected_gene': 'UBE2I', 'score': 11.86}, {'connected_gene': 'ENSG00000260954', 'score': 11.49}, {'connected_gene': 'TRAF7', 'score': 10.62}, {'connected_gene': 'ENSG00000260051', 'score': 10.61}, {'connected_gene': 'TBL3', 'score': 10.6}, {'connected_gene': 'SNORD60', 'score': 10.41}, {'connected_gene': 'ZNF598', 'score': 10.36}, {'connected_gene': 'SNORA64', 'score': 10.3}, {'connected_gene': 'SNHG19', 'score': 10.2}, {'connected_gene': 'AMDHD2', 'score': 9.77}, {'connected_gene': 'NPW', 'score': 8.38}, {'connected_gene': 'SYNGR3', 'score': 5.69}, {'connected_gene': 'ENSG00000261790', 'score': 0.44}]
chr16	GH16I001981	1981961	1982475	0.72	[{'connected_gene': 'GFER', 'score': 559.07}, {'connected_gene': 'NOXO1', 'score': 550.77}, {'connected_gene': 'TBL3', 'score': 0.39}]
chr16	GH16I001976	1976847	1981767	1.59	[{'connected_gene': 'NOXO1', 'score': 550.77}, {'connected_gene': 'ENSG00000255513', 'score': 13.93}, {'connected_gene': 'RPL3L', 'score': 11.97}, {'connected_gene': 'MSRB1', 'score': 11.9}, {'connected_gene': 'GFER', 'score': 8.31}, {'connected_gene': 'TBL3', 'score': 0.44}]