PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000524983	[[20177700, 20178119], [20178582, 20178785], [20180736, 20180838], [20181503, 20182159]]	[[20177759, 20178119], [20178582, 20178785], [20180736, 20180838], [20181503, 20181870]]
ENST00000227256	[[20177759, 20178236], [20178582, 20178785], [20180736, 20180838], [20181503, 20181870]]	[[20177759, 20178236], [20178582, 20178785], [20180736, 20180838], [20181503, 20181870]]
NM_001029865	[[20177759, 20178119], [20178582, 20178785], [20180736, 20180838], [20181503, 20181870]]	[[20177759, 20178119], [20178582, 20178785], [20180736, 20180838], [20181503, 20181870]]

Promoter

Chrom	Start	End	Description
chr11	20182017	20182023	CAGE_peak_1_at_DBX1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I020101	20101386	20105178	0.52	[{'connected_gene': 'DBX1', 'score': 10.17}, {'connected_gene': 'PIR54389', 'score': 0.37}, {'connected_gene': 'GC11M020007', 'score': 0.26}, {'connected_gene': 'NAV2', 'score': 0.03}]
chr11	GH11I020113	20113823	20115483	0.2	[{'connected_gene': 'DBX1', 'score': 10.52}, {'connected_gene': 'PIR54389', 'score': 0.77}, {'connected_gene': 'GC11M020007', 'score': 0.22}, {'connected_gene': 'NAV2', 'score': 0.02}]
chr11	GH11I020109	20109620	20113565	1.41	[{'connected_gene': 'DBX1', 'score': 10.52}, {'connected_gene': 'PIR54389', 'score': 0.44}, {'connected_gene': 'GC11M020007', 'score': 0.23}, {'connected_gene': 'NAV2', 'score': 0.02}]
chr11	GH11I020128	20128355	20128524	0.8	[{'connected_gene': 'DBX1', 'score': 10.48}, {'connected_gene': 'HTATIP2', 'score': 10.47}, {'connected_gene': 'ENSG00000279266', 'score': 0.77}, {'connected_gene': 'NAV2-AS1', 'score': 0.44}]
chr11	GH11I020166	20164335	20164484	0.31	[{'connected_gene': 'DBX1', 'score': 0.77}, {'connected_gene': 'LOC105376583', 'score': 0.34}]
chr11	GH11I020165	20163815	20163964	0.38	[{'connected_gene': 'DBX1', 'score': 0.77}, {'connected_gene': 'LOC105376583', 'score': 0.34}]
chr11	GH11I020161	20161315	20161464	0.52	[{'connected_gene': 'DBX1', 'score': 550.77}, {'connected_gene': 'LOC105376583', 'score': 0.31}]
chr11	GH11I020164	20163468	20163801	0.49	[{'connected_gene': 'DBX1', 'score': 0.77}, {'connected_gene': 'LOC105376583', 'score': 0.34}]
chr11	GH11I020163	20163995	20164144	0.31	[{'connected_gene': 'DBX1', 'score': 0.77}, {'connected_gene': 'LOC105376583', 'score': 0.34}]
chr11	GH11I019928	19928501	19930228	0.63	[{'connected_gene': 'DBX1', 'score': 9.91}, {'connected_gene': 'NAV2-AS3', 'score': 0.23}, {'connected_gene': 'GC11P019860', 'score': 0.2}, {'connected_gene': 'NAV2', 'score': 0.03}]
chr11	GH11I019917	19917983	19920363	1.09	[{'connected_gene': 'DBX1', 'score': 9.91}, {'connected_gene': 'GC11P019860', 'score': 0.22}, {'connected_gene': 'NAV2-AS3', 'score': 0.21}, {'connected_gene': 'NAV2', 'score': 0.03}]
chr11	GH11I020156	20156695	20156844	0.31	[{'connected_gene': 'DBX1', 'score': 0.77}, {'connected_gene': 'GC11P020133', 'score': 0.34}]
chr11	GH11I020158	20158675	20158924	0.57	[{'connected_gene': 'DBX1', 'score': 550.77}, {'connected_gene': 'GC11P020133', 'score': 0.31}]
chr11	GH11I020129	20129178	20130333	0.2	[{'connected_gene': 'ENSG00000279266', 'score': 550.77}, {'connected_gene': 'DBX1', 'score': 10.48}, {'connected_gene': 'HTATIP2', 'score': 10.47}, {'connected_gene': 'NAV2-AS1', 'score': 0.44}]