PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000372538	[[76993726, 76993983], [76994367, 76994501], [76994695, 76994750], [76994817, 76994936], [76995024, 76995130], [76995373, 76995501], [76995592, 76995769]]	[[76993830, 76993983], [76994367, 76994501], [76994695, 76994750], [76994817, 76994936], [76995024, 76995130], [76995373, 76995501], [76995592, 76995686]]
ENST00000460899	[[76993728, 76993983], [76994367, 76994501], [76994695, 76994936], [76995024, 76995488]]	None
ENST00000494596	[[76993735, 76993983], [76994367, 76994501], [76994695, 76994750], [76995592, 76995694]]	None
ENST00000470947	[[76993741, 76993983], [76994367, 76994501], [76994695, 76994750], [76994817, 76994936], [76995024, 76995270]]	None
ENST00000469299	[[76993741, 76993983], [76994367, 76994501], [76994695, 76994750], [76994817, 76994936], [76995024, 76995130], [76995377, 76995501], [76995592, 76995683]]	[[76993830, 76993983], [76994367, 76994501], [76994695, 76994750], [76994817, 76994936], [76995024, 76995130], [76995377, 76995501], [76995592, 76995683]]
ENST00000490521	[[76994183, 76994501], [76994695, 76994750], [76994817, 76994936], [76995024, 76995094]]	None
ENST00000491270	[[76995072, 76995130], [76995373, 76995788]]	None
NM_144589	[[76993728, 76993983], [76994367, 76994501], [76994695, 76994750], [76994817, 76994936], [76995024, 76995130], [76995373, 76995501], [76995592, 76995770]]	[[76993830, 76993983], [76994367, 76994501], [76994695, 76994750], [76994817, 76994936], [76995024, 76995130], [76995373, 76995501], [76995592, 76995686]]

Promoter

Chrom	Start	End	Description
chr10	76995654	76995663	CAGE_peak_6_at_COMTD1_5end
chr10	76995675	76995688	CAGE_peak_3_at_COMTD1_5end
chr10	76995689	76995737	CAGE_peak_1_at_COMTD1_5end
chr10	76995787	76995798	CAGE_peak_4_at_COMTD1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I075207	75207064	75213065	2.51	[{'connected_gene': 'VDAC2', 'score': 550.77}, {'connected_gene': 'KAT6B', 'score': 36.8}, {'connected_gene': 'ZNF503-AS1', 'score': 23.37}, {'connected_gene': 'COMTD1', 'score': 6.64}, {'connected_gene': 'PIR38247', 'score': 0.31}]
chr10	GH10I075215	75214034	75214642	0.2	[{'connected_gene': 'VDAC2', 'score': 0.77}, {'connected_gene': 'COMTD1', 'score': 0.34}]
chr10	GH10I075250	75250379	75252074	0.69	[{'connected_gene': 'DUSP13', 'score': 10.72}, {'connected_gene': 'ZNF503-AS1', 'score': 5.75}, {'connected_gene': 'COMTD1', 'score': 0.37}, {'connected_gene': 'RPL39P25', 'score': 0.37}]
chr10	GH10I075099	75099502	75102310	1.75	[{'connected_gene': 'DUSP13', 'score': 558.8}, {'connected_gene': 'SAMD8', 'score': 550.77}, {'connected_gene': 'ZNF503-AS1', 'score': 18.02}, {'connected_gene': 'KAT6B', 'score': 9.71}, {'connected_gene': 'PPIAP13', 'score': 7.37}, {'connected_gene': 'COMTD1', 'score': 4.94}]
chr10	GH10I075201	75201462	75203657	1.13	[{'connected_gene': 'DUSP13', 'score': 24.47}, {'connected_gene': 'COMTD1', 'score': 7.58}, {'connected_gene': 'VDAC2', 'score': 0.44}, {'connected_gene': 'PIR38247', 'score': 0.34}]
chr10	GH10I075216	75216598	75217385	0.58	[{'connected_gene': 'DUPD1', 'score': 9.18}, {'connected_gene': 'VDAC2', 'score': 0.44}, {'connected_gene': 'COMTD1', 'score': 0.37}]
chr10	GH10I075187	75187182	75188844	1.17	[{'connected_gene': 'ZNF503-AS1', 'score': 17.07}, {'connected_gene': 'PPIAP13', 'score': 6.75}, {'connected_gene': 'DUSP13', 'score': 5.97}, {'connected_gene': 'COMTD1', 'score': 5.77}, {'connected_gene': 'PIR38247', 'score': 0.44}, {'connected_gene': 'VDAC2', 'score': 0.34}, {'connected_gene': 'GC10P075147', 'score': 0.26}]
chr10	GH10I075165	75165995	75167959	0.96	[{'connected_gene': 'ZNF503-AS1', 'score': 18.64}, {'connected_gene': 'DUSP13', 'score': 16.57}, {'connected_gene': 'COMTD1', 'score': 5.5}, {'connected_gene': 'PIR38247', 'score': 0.39}, {'connected_gene': 'GC10P075147', 'score': 0.37}, {'connected_gene': 'PIR60449', 'score': 0.37}, {'connected_gene': 'SAMD8', 'score': 0.2}]
chr10	GH10I075261	75261440	75264181	1.72	[{'connected_gene': 'ZNF503-AS1', 'score': 49.41}, {'connected_gene': 'HMGA1P5', 'score': 4.43}, {'connected_gene': 'RPL39P25', 'score': 0.44}, {'connected_gene': 'COMTD1', 'score': 0.31}]
chr10	GH10I075222	75222453	75227728	1.15	[{'connected_gene': 'ZNF503-AS1', 'score': 16.53}, {'connected_gene': 'DUPD1', 'score': 9.99}, {'connected_gene': 'COMTD1', 'score': 7.42}, {'connected_gene': 'VDAC2', 'score': 4.8}, {'connected_gene': 'PPIAP13', 'score': 4.39}]
chr10	GH10I075214	75214706	75216325	0.38	[{'connected_gene': 'ZNF503-AS1', 'score': 18.44}, {'connected_gene': 'DUPD1', 'score': 9.18}, {'connected_gene': 'COMTD1', 'score': 6.57}, {'connected_gene': 'DUSP13', 'score': 5.93}, {'connected_gene': 'VDAC2', 'score': 0.44}]
chr10	GH10I075252	75252753	75254012	0.84	[{'connected_gene': 'ZNF503-AS1', 'score': 13.04}, {'connected_gene': 'KAT6B', 'score': 12.37}, {'connected_gene': 'COMTD1', 'score': 0.37}, {'connected_gene': 'RPL39P25', 'score': 0.37}]
chr10	GH10I075228	75228089	75229540	0.56	[{'connected_gene': 'ZNF503-AS1', 'score': 17.54}, {'connected_gene': 'COMTD1', 'score': 7.46}, {'connected_gene': 'PPIAP13', 'score': 4.4}, {'connected_gene': 'VDAC2', 'score': 0.37}]
chr10	GH10I075229	75229601	75232662	1.07	[{'connected_gene': 'ZNF503-AS1', 'score': 18.16}, {'connected_gene': 'COMTD1', 'score': 7.8}, {'connected_gene': 'DUSP13', 'score': 5.92}, {'connected_gene': 'PPIAP13', 'score': 4.35}, {'connected_gene': 'VDAC2', 'score': 0.34}]
chr10	GH10I075243	75243483	75248184	0.98	[{'connected_gene': 'ZNF503-AS1', 'score': 32.59}, {'connected_gene': 'RPL39P25', 'score': 13.46}, {'connected_gene': 'HMGA1P5', 'score': 13.41}, {'connected_gene': 'DUSP13', 'score': 11.42}, {'connected_gene': 'DUPD1', 'score': 9.41}, {'connected_gene': 'COMTD1', 'score': 0.44}]
chr10	GH10I075238	75238161	75238564	0.74	[{'connected_gene': 'ZNF503-AS1', 'score': 31.02}, {'connected_gene': 'RPL39P25', 'score': 13.41}, {'connected_gene': 'HMGA1P5', 'score': 13.4}, {'connected_gene': 'DUPD1', 'score': 9.41}, {'connected_gene': 'COMTD1', 'score': 7.58}, {'connected_gene': 'VDAC2', 'score': 4.41}]
chr10	GH10I075254	75254164	75255783	0.64	[{'connected_gene': 'KAT6B', 'score': 12.37}, {'connected_gene': 'ZNF503-AS1', 'score': 11.26}, {'connected_gene': 'HMGA1P5', 'score': 5.35}, {'connected_gene': 'RPL39P25', 'score': 0.39}, {'connected_gene': 'COMTD1', 'score': 0.37}]
chr10	GH10I075232	75232985	75236622	2.27	[{'connected_gene': 'COMTD1', 'score': 557.8}, {'connected_gene': 'DUSP13', 'score': 13.71}, {'connected_gene': 'KAT6B', 'score': 13.31}, {'connected_gene': 'ZNF503-AS1', 'score': 4.81}, {'connected_gene': 'VDAC2', 'score': 0.34}]
chr10	GH10I075156	75156636	75157042	0.25	[{'connected_gene': 'COMTD1', 'score': 5.81}, {'connected_gene': 'SAMD8', 'score': 2.53}, {'connected_gene': 'KAT6B', 'score': 2.08}, {'connected_gene': 'GC10P075147', 'score': 0.44}, {'connected_gene': 'PIR60449', 'score': 0.44}, {'connected_gene': 'PIR38247', 'score': 0.34}]
chr10	GH10I075168	75168403	75168552	0.83	[{'connected_gene': 'COMTD1', 'score': 5.83}, {'connected_gene': 'PIR38247', 'score': 0.39}, {'connected_gene': 'PIR60449', 'score': 0.37}, {'connected_gene': 'GC10P075147', 'score': 0.34}, {'connected_gene': 'SAMD8', 'score': 0.2}]
chr10	GH10I075240	75240015	75241231	0.58	[{'connected_gene': 'RPL39P25', 'score': 13.43}, {'connected_gene': 'ZNF503-AS1', 'score': 13.43}, {'connected_gene': 'HMGA1P5', 'score': 13.4}, {'connected_gene': 'DUPD1', 'score': 9.41}, {'connected_gene': 'COMTD1', 'score': 0.77}]
chr10	GH10I075638	75638629	75638827	0.58	[{'connected_gene': 'GC10P075638', 'score': 550.77}, {'connected_gene': 'MIR606', 'score': 10.65}, {'connected_gene': 'LRMDA', 'score': 9.67}, {'connected_gene': 'ENSG00000236842', 'score': 9.67}, {'connected_gene': 'COMTD1', 'score': 4.39}, {'connected_gene': 'ENSG00000268659', 'score': 0.77}, {'connected_gene': 'GC10P075624', 'score': 0.39}]