PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000536333	[[63137260, 63137930], [63138606, 63138710], [63141365, 63141534], [63143116, 63143240], [63149630, 63149749], [63173968, 63174183], [63177273, 63177430]]	[[63137528, 63137930], [63138606, 63138710], [63141365, 63141534], [63143116, 63143158]]
ENST00000310969	[[63137260, 63137930], [63138606, 63138710], [63141365, 63141534], [63143116, 63143240], [63149630, 63149749], [63173968, 63174183], [63175583, 63175692], [63176147, 63176351], [63177273, 63177710]]	[[63137528, 63137930], [63138606, 63138710], [63141365, 63141534], [63143116, 63143158]]
ENST00000279178	[[63137279, 63137930], [63138606, 63138710], [63141115, 63141270], [63141365, 63141534], [63143116, 63143240], [63149630, 63149749], [63173968, 63174183], [63175583, 63175692], [63176147, 63176351], [63177273, 63177766]]	[[63137528, 63137930], [63138606, 63138710], [63141115, 63141270], [63141365, 63141534], [63143116, 63143240], [63149630, 63149749], [63173968, 63174183], [63175583, 63175692], [63176147, 63176351], [63177273, 63177334]]
NM_080866	[[63137260, 63137930], [63138606, 63138710], [63141115, 63141270], [63141365, 63141534], [63143116, 63143240], [63149630, 63149749], [63173968, 63174183], [63175583, 63175692], [63176147, 63176351], [63177273, 63177731]]	[[63137528, 63137930], [63138606, 63138710], [63141115, 63141270], [63141365, 63141534], [63143116, 63143240], [63149630, 63149749], [63173968, 63174183], [63175583, 63175692], [63176147, 63176351], [63177273, 63177334]]

Promoter

Chrom	Start	End	Description
chr11	63137251	63137267	CAGE_peak_1_at_SLC22A9_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I063245	63245872	63249207	0.81	[{'connected_gene': 'SLC22A8', 'score': 10.65}, {'connected_gene': 'SLC22A9', 'score': 10.49}, {'connected_gene': 'SLC22A25', 'score': 9.57}, {'connected_gene': 'LOC105369334', 'score': 0.77}, {'connected_gene': 'SLC22A10', 'score': 0.14}]
chr11	GH11I063448	63448385	63449411	0.38	[{'connected_gene': 'NUDT22', 'score': 4.83}, {'connected_gene': 'LBHD1', 'score': 4.05}, {'connected_gene': 'LOC100533643', 'score': 0.34}, {'connected_gene': 'SLC22A9', 'score': 0.18}]
chr11	GH11I063290	63290166	63290225	0.61	[{'connected_gene': 'SLC22A10', 'score': 550.1}, {'connected_gene': 'ENSG00000256181', 'score': 0.34}, {'connected_gene': 'SLC22A9', 'score': 0.18}]
chr11	GH11I063243	63243400	63244061	0.66	[{'connected_gene': 'SLC22A25', 'score': 571.35}, {'connected_gene': 'CCND2P1', 'score': 550.77}, {'connected_gene': 'SLC22A10', 'score': 38.66}, {'connected_gene': 'SLC22A9', 'score': 8.29}, {'connected_gene': 'SLC22A24', 'score': 2.16}, {'connected_gene': 'LOC105369334', 'score': 0.44}]
chr11	GH11I063362	63362549	63362578	0.69	[{'connected_gene': 'SLC22A9', 'score': 0.44}, {'connected_gene': 'ENSG00000256181', 'score': 0.15}, {'connected_gene': 'SLC22A10', 'score': 0.07}]
chr11	GH11I063404	63404189	63405101	0.81	[{'connected_gene': 'SLC22A9', 'score': 11.17}, {'connected_gene': 'PLA2G16', 'score': 4.81}, {'connected_gene': 'LOC100533643', 'score': 0.21}]
chr11	GH11I063369	63369736	63369795	1.03	[{'connected_gene': 'SLC22A9', 'score': 550.77}, {'connected_gene': 'ENSG00000256181', 'score': 0.15}]
chr11	GH11I063459	63459189	63459951	0.52	[{'connected_gene': 'ENSG00000256789', 'score': 10.99}, {'connected_gene': 'LOC100533643', 'score': 0.44}, {'connected_gene': 'SLC22A9', 'score': 0.17}]