PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000435820	[[22235253, 22235437], [22243309, 22243430], [22255610, 22255737], [22256270, 22256366], [22270778, 22273905]]	[[22235434, 22235437], [22243309, 22243414]]
ENST00000594363	[[22235285, 22235437], [22255610, 22255737], [22256270, 22256366], [22257173, 22257355]]	[[22235434, 22235437], [22255610, 22255737], [22256270, 22256366], [22257173, 22257355]]
ENST00000597927	[[22235285, 22235437], [22270778, 22271178]]	[[22270780, 22271178]]
ENST00000594947	[[22235290, 22235437], [22255610, 22255737], [22256270, 22256366], [22270778, 22274282]]	[[22235434, 22235437], [22255610, 22255737], [22256270, 22256366], [22270778, 22272244]]
ENST00000597796	[[22235310, 22235437], [22243309, 22243430], [22255610, 22255737], [22256270, 22256366], [22258171, 22258667]]	[[22235434, 22235437], [22243309, 22243414]]
ENST00000596471	[[22235325, 22235437], [22243309, 22243430], [22246880, 22247134]]	None
ENST00000600162	[[22235337, 22235437], [22255610, 22255737], [22256270, 22256366], [22270332, 22270397], [22270778, 22271207]]	[[22235434, 22235437], [22255610, 22255737], [22256270, 22256366], [22270332, 22270355]]
NM_001316998	[[22235249, 22235437], [22270778, 22273905]]	[[22270780, 22272244]]
NM_033468	[[22235249, 22235437], [22255610, 22255737], [22256270, 22256366], [22270778, 22273905]]	[[22235434, 22235437], [22255610, 22255737], [22256270, 22256366], [22270778, 22272244]]
NM_001316997	[[22235249, 22235437], [22255610, 22255737], [22256270, 22256366], [22270332, 22270397], [22270778, 22273905]]	[[22270780, 22272244]]
NM_001316996	[[22235249, 22235437], [22243309, 22243430], [22255610, 22255737], [22256270, 22256366], [22270778, 22273905]]	[[22255703, 22255737], [22256270, 22256366], [22270778, 22272244]]

Promoter

Chrom	Start	End	Description
chr19	22235279	22235301	CAGE_peak_1_at_ZNF257_5end
chr19	22235310	22235319	CAGE_peak_2_at_ZNF257_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I022429	22427465	22427740	0.27	[{'connected_gene': 'ZNF208', 'score': 15.49}, {'connected_gene': 'ZNF98', 'score': 8.49}, {'connected_gene': 'ZNF257', 'score': 2.27}, {'connected_gene': 'ZNF492', 'score': 2.18}, {'connected_gene': 'ZNF676', 'score': 1.34}, {'connected_gene': 'GC19M022427', 'score': 0.77}, {'connected_gene': 'ENSG00000269796', 'score': 0.44}]
chr19	GH19I022541	22541814	22542054	0.22	[{'connected_gene': 'ZNF98', 'score': 2.92}, {'connected_gene': 'ZNF257', 'score': 1.67}, {'connected_gene': 'ZNF492', 'score': 1.41}, {'connected_gene': 'GC19M022543', 'score': 0.77}, {'connected_gene': 'LINC01233', 'score': 0.44}]
chr19	GH19I022051	22051839	22053400	1.72	[{'connected_gene': 'ZNF257', 'score': 566.83}, {'connected_gene': 'BNIP3P29', 'score': 11.14}, {'connected_gene': 'ZNF208', 'score': 5.36}, {'connected_gene': 'ENSG00000269199', 'score': 0.77}, {'connected_gene': 'PIR50216', 'score': 0.77}]