PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000264995	[[131181055, 131181719], [131186934, 131187012], [131188539, 131188617], [131190014, 131190123], [131206523, 131206584], [131208824, 131208924], [131217022, 131217121], [131219273, 131219365], [131220374, 131220559], [131221573, 131221813]]	[[131181566, 131181719], [131186934, 131187012], [131188539, 131188617], [131190014, 131190123], [131206523, 131206584], [131208824, 131208924], [131217022, 131217121], [131219273, 131219365], [131220374, 131220559], [131221573, 131221665]]
ENST00000511168	[[131181279, 131181719], [131186934, 131187012], [131188539, 131188617], [131190014, 131190123], [131206523, 131206584], [131208824, 131208924], [131217022, 131217121], [131219273, 131219365], [131220374, 131220559], [131221692, 131221827]]	[[131181566, 131181719], [131186934, 131187012], [131188539, 131188617], [131190014, 131190123], [131206523, 131206584], [131208824, 131208924], [131217022, 131217121], [131219273, 131219365], [131220374, 131220559], [131221692, 131221827]]
ENST00000425847	[[131181399, 131181719], [131186934, 131187012], [131188539, 131188617], [131190014, 131190123], [131206523, 131206584], [131208824, 131208924], [131217022, 131217121], [131219273, 131219365], [131220374, 131220559], [131220687, 131220768], [131221573, 131221827]]	[[131181566, 131181719], [131186934, 131187012], [131188539, 131188617], [131190014, 131190123], [131206523, 131206584], [131208824, 131208924], [131217022, 131217121], [131219273, 131219365], [131220374, 131220559], [131220687, 131220768], [131221573, 131221665]]
ENST00000507669	[[131188575, 131188617], [131190014, 131190123], [131206523, 131206584], [131208824, 131208924], [131217022, 131217121], [131219273, 131219365], [131220374, 131220559], [131221626, 131221786]]	[[131188575, 131188617], [131190014, 131190123], [131206523, 131206584], [131208824, 131208924], [131217022, 131217121], [131219273, 131219327]]
ENST00000510043	[[131181397, 131181719], [131186934, 131187012], [131188539, 131188617], [131190016, 131190178]]	None
ENST00000506487	[[131205993, 131206584], [131208824, 131208867]]	None
ENST00000512877	[[131206524, 131206584], [131208824, 131208924], [131219273, 131219365], [131220374, 131220559], [131221573, 131221795]]	[[131206524, 131206584], [131208824, 131208924], [131219273, 131219365], [131220374, 131220559], [131221573, 131221665]]
ENST00000506946	[[131207514, 131207644], [131208824, 131208924], [131217022, 131217121], [131219273, 131219328]]	None
ENST00000510923	[[131216823, 131217121], [131219273, 131219365], [131220374, 131220559], [131221573, 131221811]]	None
ENST00000510154	[[131217090, 131217121], [131219273, 131219365], [131220374, 131220559], [131220687, 131220768], [131221638, 131221781]]	[[131217090, 131217121], [131219273, 131219327]]
NM_007208	[[131181044, 131181719], [131186934, 131187012], [131188539, 131188617], [131190014, 131190123], [131206523, 131206584], [131208824, 131208924], [131217022, 131217121], [131219273, 131219365], [131220374, 131220559], [131221573, 131221860]]	[[131181566, 131181719], [131186934, 131187012], [131188539, 131188617], [131190014, 131190123], [131206523, 131206584], [131208824, 131208924], [131217022, 131217121], [131219273, 131219365], [131220374, 131220559], [131221573, 131221665]]

Promoter

Chrom	Start	End	Description
chr3	131221661	131221675	CAGE_peak_4_at_MRPL3_5end
chr3	131221688	131221701	CAGE_peak_3_at_MRPL3_5end
chr3	131221771	131221789	CAGE_peak_2_at_MRPL3_5end
chr3	131221790	131221835	CAGE_peak_1_at_MRPL3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I131380	131380240	131382801	2.16	[{'connected_gene': 'NUDT16', 'score': 557.4}, {'connected_gene': 'LOC339874', 'score': 550.77}, {'connected_gene': 'PIK3R4', 'score': 20.43}, {'connected_gene': 'ATP2C1', 'score': 11.33}, {'connected_gene': 'MRPL3', 'score': 10.27}, {'connected_gene': 'ASTE1', 'score': 10.1}]
chr3	GH03I131501	131501429	131503801	2.1	[{'connected_gene': 'MRPL3', 'score': 561.62}, {'connected_gene': 'LOC105374114', 'score': 550.77}, {'connected_gene': 'PIK3R4', 'score': 14.01}, {'connected_gene': 'ENSG00000261167', 'score': 10.91}, {'connected_gene': 'DNAJC13', 'score': 9.77}]