PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
SUMO2	0	KDM1A	2	pull down	Ouyang J (2009)	1
SIRT6	2	RBBP4	3	affinity chromatography technology	Simeoni F (2013)	1
THOC7	0	VIM	0	biochemical	Havugimana PC (2012)	1
FOXA1	2	CHD3	19	affinity chromatography technology	Jozwik KM (2016)	1
CHD3	19	HIST1H2BB	3	affinity chromatography technology	Klement K (2014)	1
BARD1	4	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Dong Y (2003), Dong Y (2003), Feki A (2005), Jiang J (2011), Tembe V (2015), Tembe V (2015), Tembe V (2015)	7
JUN	0	MTA3	3	affinity chromatography technology	Aguilera C (2011)	1
TP53	0	TP73	2	affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology	Stindt MH (2015), Puca R (2011), De Laurenzi V (1998), Di Como CJ (1999)	4
TRIM25	5	CHD4	22	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017)	2
TSPAN6	0	LRIF1	3	two hybrid	Stelzl U (2005)	1
FBP2	0	CHD3	19	two hybrid	Stelzl U (2005)	1
MX1	0	CHD3	19	two hybrid	Brantis-de-Carvalho CE (2015)	1
YAE1D1	1	CHD3	19	two hybrid, two hybrid	Stelzl U (2005), Vinayagam A (2011)	2
VIM	0	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
PUF60	16	CHD3	19	two hybrid	Stelzl U (2005)	1
MCM2	3	HSF1	1	affinity chromatography technology	Boldt K (2016)	1
CHD4	22	CHD3	19	affinity chromatography technology, affinity chromatography technology, biochemical	Xue Y (1998), Xue Y (1998), Havugimana PC (2012)	3
BMI1	0	NXF1	0	affinity chromatography technology	Cao Q (2014)	1
BMI1	0	IK	6	affinity chromatography technology	Cao Q (2014)	1
UHRF2	1	TP53	0	far western blotting, affinity chromatography technology, affinity chromatography technology, pull down	Mori T (2011), Mori T (2011), Mori T (2011), Mori T (2011)	4
SUMO2	0	MYB	3	pull down	Saether T (2011)	1
TSPAN6	0	CHD3	19	two hybrid	Stelzl U (2005)	1
CASP6	0	CASP8	1	enzymatic study, enzymatic study, enzymatic study	Cowling V (2002), Guo Y (2002), Srinivasula SM (1996)	3
RNF2	1	HDAC2	1	affinity chromatography technology	Cao Q (2014)	1
MOV10	6	CHD3	19	affinity chromatography technology	Castello A (2012)	1
MTA1	3	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yan C (2003), Khaleque MA (2008), Xue Y (1998), Wan C (2015)	4
TRIM25	5	METAP2	3	affinity chromatography technology	Choudhury NR (2017)	1
MX1	0	UBE2I	0	two hybrid, affinity chromatography technology	Brantis-de-Carvalho CE (2015), Brantis-de-Carvalho CE (2015)	2
IK	6	SMARCA5	4	biochemical	Havugimana PC (2012)	1
PCNT	10	MBD3	4	affinity chromatography technology	Sillibourne JE (2007)	1
KDM5B	27	MBD2	1	affinity chromatography technology	Li Q (2011)	1
SUMO2	0	GATAD2B	15	pull down	Ouyang J (2009)	1
PHF20L1	4	CHD4	22	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RGS2	2	METAP2	3	affinity chromatography technology	Huttlin EL (2017)	1
IK	6	KDM1A	2	two hybrid	Weimann M (2013)	1
BARD1	4	LRIF1	3	two hybrid	Goehler H (2004)	1
SMARCA2	17	SIN3A	13	biochemical, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Sif S (2001), Sif S (2001), Pal S (2003), Pal S (2003), Nakamura T (2002), Nakamura T (2002), Kemper JK (2004), Kemper JK (2004), Wan C (2015)	9
ZNF827	2	MTA3	3	affinity chromatography technology	Conomos D (2014)	1
GATAD2B	15	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	3
CHD4	22	GATAD2A	3	affinity chromatography technology, biochemical, affinity chromatography technology	Rahman S (2011), Havugimana PC (2012), Huttlin EL (2017)	3
SERBP1	2	PIAS4	5	two hybrid	Lemos TA (2006)	1
KDM1A	2	RBBP7	1	affinity chromatography technology	Li Q (2011)	1
MBD2	1	SIN3A	13	pull down, two hybrid	Boeke J (2000), Boeke J (2000)	2
NR1H2	2	UBE2I	0	two hybrid	Albers M (2005)	1
IVNS1ABP	0	HNRNPL	3	affinity chromatography technology, affinity chromatography technology	Tsai PL (2013), Tsai PL (2013)	2
KDM5B	27	HDAC2	1	affinity chromatography technology	Li Q (2011)	1
HYPK	2	CHD3	19	affinity chromatography technology	Choudhury KR (2012)	1
KDM1A	2	MTA1	3	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Wang Y (2009), Wang Y (2009), Cui S (2011), Cui S (2011)	4
CHD3	19	ZHX1	1	two hybrid	Goehler H (2004)	1
KDM1A	2	CHD3	19	affinity chromatography technology, affinity chromatography technology	Wang Y (2009), Li Q (2011)	2
SDCCAG3	3	CHD3	19	two hybrid	Stelzl U (2005)	1
SAT1	0	ZHX1	1	two hybrid	Stelzl U (2005)	1
HIC1	1	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Van Rechem C (2010), Dehennaut V (2013), Dehennaut V (2013)	3
RNF2	1	RAD21	3	affinity chromatography technology	Cao Q (2014)	1
TXNDC9	0	CHD3	19	two hybrid	Stelzl U (2005)	1
PCMT1	1	CHD3	19	two hybrid	Stelzl U (2005)	1
TRIM28	1	MYB	3	pull down, pull down, affinity chromatography technology	Nomura T (2004), Nomura T (2004), Nomura T (2004)	3
GSK3B	1	ATPIF1	0	two hybrid	Vinayagam A (2011)	1
BMI1	0	LRIF1	3	two hybrid	Stelzl U (2005)	1
TP53	0	DDX5	2	affinity chromatography technology, affinity chromatography technology	Fogeron ML (2013), Horikawa I (2014)	2
SATB1	1	UBE2I	0	two hybrid, two hybrid, two hybrid, enzymatic study	Rual JF (2005), Tan JA (2010), Tan JA (2008), Gocke CB (2005)	4
CHD4	22	HIST1H3A	3	unspecified method, x-ray crystallography, x-ray crystallography, unspecified method	Mansfield RE (2011), Mansfield RE (2011), Allen HF (2014), Allen HF (2014)	4
PHF20L1	4	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
UHRF2	1	CHD3	19	affinity chromatography technology	Lai M (2016)	1
MCM2	3	HIST1H3A	3	affinity chromatography technology, affinity chromatography technology	Drissi R (2015), Huttlin EL (2017)	2
HIST1H3A	3	HIST1H2BB	3	affinity chromatography technology	Klement K (2014)	1
PTN	0	TSC22D1	1	two hybrid	Wang J (2011)	1
TNNT1	0	IMMT	0	two hybrid	Vinayagam A (2011)	1
SOX2	4	RBBP7	1	affinity chromatography technology	Engelen E (2011)	1
CREB1	1	TP53	0	pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Giebler HA (2000), Giebler HA (2000), Giebler HA (2000), Okoshi R (2011), Borger DR (2006), Chen TC (2014)	6
ZNF219	3	MBD2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BCL6	6	HDAC2	1	affinity chromatography technology	Bereshchenko OR (2002)	1
BMI1	0	SNW1	0	affinity chromatography technology	Cao Q (2014)	1
LUC7L2	0	SHMT2	3	biochemical	Kristensen AR (2012)	1
RNF2	1	CSNK2A1	15	affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Cao Q (2014), Gao Z (2014), Hauri S (2016), Hauri S (2016)	5
MBD2	1	KDM1A	2	affinity chromatography technology, affinity chromatography technology	Godmann M (2007), Godmann M (2007)	2
CREB1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Canettieri G (2003), Kim HC (2010)	2
HNRNPL	3	CHD3	19	affinity chromatography technology	Fei T (2017)	1
LUC7L2	0	PTN	0	two hybrid	Stelzl U (2005)	1
MBD2	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Brackertz M (2002), Ng HH (1999), Ng HH (1999), Ng HH (1999), Zhang Y (1999), Zhang Y (1999), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Godmann M (2007), Bantscheff M (2011), Joshi P (2013), Fujita H (2003), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	16
SMARCA2	17	MYB	3	pull down	Kowenz-Leutz E (1999)	1
MTA2	1	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Zhang Y (1998), Wang Y (2009), Cui S (2011), Havugimana PC (2012), Quan J (2014), Wan C (2015)	8
RNF2	1	RBBP4	3	affinity chromatography technology	Cao Q (2014)	1
YAE1D1	1	VIM	0	two hybrid, two hybrid	Stelzl U (2005), Vinayagam A (2011)	2
GPS2	0	CREB1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BHLHE40	5	CHD3	19	two hybrid	Stelzl U (2005)	1
CCDC8	1	ENO1	3	affinity chromatography technology	Hanson D (2014)	1
GADD45A	1	CHD3	19	two hybrid	Vinayagam A (2011)	1
NXF1	0	RAD51	3	two hybrid	Wang J (2011)	1
ZNF219	3	MBD3	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SUMO2	0	ZHX1	1	two hybrid	Hecker CM (2006)	1
NR1H2	2	CHD3	19	two hybrid	Vinayagam A (2011)	1
PUF60	16	MOV10	6	affinity chromatography technology	Ewing RM (2007)	1
KMT2A	58	MBD3	4	affinity chromatography technology	Nakamura T (2002)	1
CHD4	22	GATAD2B	15	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rahman S (2011), Huttlin EL (2015), Huttlin EL (2017)	3
JUN	0	BCL6	6	pull down, pull down, two hybrid	Vasanwala FH (2002), Vasanwala FH (2002), Vasanwala FH (2002)	3
NXF1	0	CHD3	19	affinity chromatography technology	Castello A (2012)	1
SMARCA2	17	MBD3	4	affinity chromatography technology	Nakamura T (2002)	1
SUMO1	0	TP73	2	two hybrid	Minty A (2000)	1
MCM2	3	ENO1	3	affinity chromatography technology	Drissi R (2015)	1
MTA3	3	RBBP4	3	affinity chromatography technology, biochemical, affinity chromatography technology	Bantscheff M (2011), Wan C (2015), Hauri S (2016)	3
HIC1	1	MBD3	4	affinity chromatography technology	Van Rechem C (2010)	1
HDAC1	4	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Yao YL (2003), Yao YL (2003), Yao YL (2003), Mazumdar A (2001), Mazumdar A (2001), Yoo YG (2006), Liu XF (2004), Khaleque MA (2008), Terhune SS (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Millard CJ (2016), Millard CJ (2016)	21
TRIM25	5	GATAD2B	15	affinity chromatography technology	Choudhury NR (2017)	1
PHF20L1	4	KDM1A	2	two hybrid	Weimann M (2013)	1
UHRF2	1	UBE2I	0	affinity chromatography technology	Oh Y (2013)	1
BMI1	0	TP53	0	affinity chromatography technology, affinity chromatography technology	Calao M (2012), Yin J (2013)	2
TRIM28	1	SIN3A	13	pull down	Nomura T (2004)	1
SATB1	1	HDAC2	1	biochemical	Yasui D (2002)	1
SPOP	1	UBE2I	0	two hybrid	Zhang P (2017)	1
CRCT1	1	PTN	0	two hybrid	Stelzl U (2005)	1
HIC1	1	RBBP4	3	affinity chromatography technology	Van Rechem C (2010)	1
HSF1	1	SIRT1	3	affinity chromatography technology	Westerheide SD (2009)	1
ZHX1	1	PIAS4	5	two hybrid	Goehler H (2004)	1
ENO1	3	CHD3	19	affinity chromatography technology	Castello A (2012)	1
GADD45A	1	VIM	0	two hybrid	Vinayagam A (2011)	1
HTT	14	CTBP1	2	affinity chromatography technology	Kegel KB (2002)	1
UBC	7	CHD3	19	pull down	Nathan JA (2013)	1
CDK2AP1	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	5
SOX2	4	CHD6	6	affinity chromatography technology	Cox JL (2013)	1
FOXA1	2	HIST1H3A	3	affinity chromatography technology	Jozwik KM (2016)	1
HIST1H3A	3	HDAC2	1	affinity chromatography technology, enzymatic study, pull down	Nishioka K (2002), Gyoery I (2003), Li X (2014)	3
RBBP4	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Hakimi MA (2003), Zhang Y (2002), Tong JK (1998), Sun JM (2007), Sun JM (2007), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Wan C (2015), Hauri S (2016)	14
MTA2	1	KPNB1	3	affinity chromatography technology	Brasen C (2017)	1
SPOP	1	SUMO1	0	two hybrid	Zhang P (2017)	1
TP53	0	TAF6	4	pull down, affinity chromatography technology, affinity chromatography technology	Wilhelm E (2010), Wilhelm E (2010), Wilhelm E (2010)	3
KDM5B	27	KMT2A	58	genetic interference	Wong AS (2016)	1
PCMT1	1	ENO1	3	biochemical	Wan C (2015)	1
FOXA1	2	SAFB	3	affinity chromatography technology	Jozwik KM (2016)	1
BMI1	0	CHD4	22	affinity chromatography technology	Cao Q (2014)	1
HIST1H3A	3	GATAD2B	15	pull down	Brackertz M (2006)	1
MCM2	3	SERBP1	2	affinity chromatography technology	Drissi R (2015)	1
HSD17B10	1	ENO1	3	biochemical	Wan C (2015)	1
HSD17B10	1	CD2BP2	0	affinity chromatography technology	Malty RH (2017)	1
GSK3B	1	JUN	0	enzymatic study, imaging technique	Chen BK (2007), Chen TC (2014)	2
CTBP1	2	ZNF219	3	two hybrid	Vinayagam A (2011)	1
RAD21	3	CHD4	22	affinity chromatography technology	Panigrahi AK (2011)	1
BHLHE40	5	VIM	0	two hybrid	Stelzl U (2005)	1
MAN2A2	11	CHD3	19	two hybrid	Stelzl U (2005)	1
RPL10	3	NXF1	0	affinity chromatography technology	Hein MY (2015)	1
MBD3	4	GATAD2B	15	pull down, pull down, affinity chromatography technology, imaging technique, pull down, two hybrid, affinity chromatography technology, biochemical, two hybrid, affinity chromatography technology	Brackertz M (2002), Feng Q (2002), Feng Q (2002), Feng Q (2002), Gong Z (2006), Rolland T (2014), Huttlin EL (2015), Wan C (2015), Yu H (2011), Huttlin EL (2017)	10
JUN	0	CSNK2A1	15	pull down, far western blotting, enzymatic study	Yamaguchi Y (1998), Yamaguchi Y (1998), Uhle S (2003)	3
CDK2AP1	1	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
RAD51	3	UBE2I	0	two hybrid, two hybrid	Kovalenko OV (1996), Shen Z (1996)	2
SIRT6	2	TRIM28	1	affinity chromatography technology	Simeoni F (2013)	1
PHF6	1	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, x-ray crystallography, affinity chromatography technology	Todd MA (2012), Todd MA (2012), Todd MA (2012), Liu Z (2015), Liu Z (2015), Liu Z (2015)	6
BMI1	0	KDM1A	2	genetic interference	Wong AS (2016)	1
MBD2	1	CHD3	19	pull down, affinity chromatography technology	Zhang Y (1999), Feng Q (2001)	2
ZNF219	3	GATAD2B	15	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SIRT1	3	CSNK2A1	15	affinity chromatography technology, affinity chromatography technology	Holloway KR (2010), Kang H (2009)	2
FUBP1	1	CHD3	19	two hybrid	Stelzl U (2005)	1
LUC7L2	0	CSNK2A1	15	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RBBP7	1	GATAD2B	15	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Feng Q (2002), Gong Z (2006), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	6
GPS2	0	CHD3	19	two hybrid	Stelzl U (2005)	1
CD2BP2	0	SNRNP40	1	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ewing RM (2007), Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Cloutier P (2017)	5
MBD3	4	MBD2	1	two hybrid, pull down, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, pull down, affinity chromatography technology	Jiang CL (2004), Zhang Y (1999), Tatematsu KI (2000), Tatematsu KI (2000), Tatematsu KI (2000), Tatematsu KI (2000), Jin SG (2005), Jin SG (2005), Jin SG (2005), Feng Q (2001)	10
TRIM25	5	PCMT1	1	affinity chromatography technology	Choudhury NR (2017)	1
SATB1	1	TAL1	0	affinity chromatography technology, affinity chromatography technology	Wen J (2005), Wen J (2005)	2
TP53	0	UBC	7	affinity chromatography technology, affinity chromatography technology	Ayroldi E (2014), Ke JY (2014)	2
TP73	2	HDAC2	1	affinity chromatography technology	Zhang J (2007)	1
MOV10	6	CPSF1	6	affinity chromatography technology	Castello A (2012)	1
KDM1A	2	CTBP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Shi YJ (2005), Lee MG (2005), Kuppuswamy M (2008), Kuppuswamy M (2008), Keutgens A (2010), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	8
BHLHE40	5	TP53	0	affinity chromatography technology	Thin TH (2007)	1
GATAD2B	15	GATAD2A	3	biochemical	Wan C (2015)	1
CHD3	19	VIM	0	two hybrid	Goehler H (2004)	1
MTA1	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Mazumdar A (2001), Mazumdar A (2001), Mazumdar A (2001), Li DQ (2010), Yan C (2003), Balasenthil S (2007), Ohshiro K (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	16
MBD2	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Brackertz M (2002), Ng HH (1999), Zhang Y (1999), Angrisano T (2006), Feng Q (2001), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	8
BARD1	4	MTA2	1	affinity chromatography technology	Woods NT (2012)	1
SIRT6	2	TRIM25	5	affinity chromatography technology	Simeoni F (2013)	1
SMARCA2	17	HDAC1	4	biochemical, affinity chromatography technology, affinity chromatography technology	Sif S (2001), Nakamura T (2002), Hein MY (2015)	3
CTBP1	2	UBE2I	0	affinity chromatography technology	Kuppuswamy M (2008)	1
HDAC1	4	HSF1	1	affinity chromatography technology, affinity chromatography technology	Fritah S (2009), Khaleque MA (2008)	2
RPL29	0	CHD3	19	two hybrid	Stelzl U (2005)	1
GIT1	10	LRIF1	3	pull down, two hybrid	Goehler H (2004), Goehler H (2004)	2
SNW1	0	CHD4	22	affinity chromatography technology	Lleres D (2010)	1
SATB1	1	SIN3A	13	biochemical	Yasui D (2002)	1
SOX2	4	HDAC2	1	affinity chromatography technology	Engelen E (2011)	1
PCNT	10	MTA2	1	affinity chromatography technology, affinity chromatography technology	Sillibourne JE (2007), Hein MY (2015)	2
HDAC1	4	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (2003), Yao YL (2003), Yao YL (2003), Fleischer TC (2003), Fleischer TC (2003), Yang L (2003), Grozinger CM (1999), Zhang J (2002), Zhang J (2002), You A (2001), Zhang Y (1999), Zhang Y (2002), Tong JK (1998), Hassig CA (1998), Yasui D (2002), Huang EY (2000), Huang EY (2000), Kuzmichev A (2002), Kuzmichev A (2002), Martinowich K (2003), Martinowich K (2003), Suzuki M (2003), Suzuki M (2006), Nakamura T (2002), Wei Q (2005), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Skowyra D (2001), Humphrey GW (2001), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Sun JM (2007), Karwowska-Desaulniers P (2007), Terhune SS (2010), Xue Y (1998), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Oh YM (2009), Wan C (2015), Hein MY (2015), Hsu DS (2014), Huttlin EL (2017)	45
HDAC1	4	TRIM28	1	affinity chromatography technology, affinity chromatography technology, biochemical	Allouch A (2011), Chen L (2012), Kristensen AR (2012)	3
RPL10	3	BRD1	5	affinity chromatography technology	Hein MY (2015)	1
BARD1	4	RAD51	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Dong Y (2003), Dong Y (2003), Hu Y (2014)	3
RBBP4	3	GATAD2B	15	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Feng Q (2002), Gong Z (2006), Huttlin EL (2017), Hauri S (2016)	5
SUMO2	0	UBE2I	0	affinity chromatography technology, pull down, two hybrid, two hybrid, pull down, pull down, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, biochemical, affinity chromatography technology, affinity chromatography technology	Li T (2006), Knipscheer P (2007), Boutell C (2011), Hecker CM (2006), Hecker CM (2006), Zilio N (2013), Tatham MH (2001), Knipscheer P (2007), Ullmann R (2012), Matic I (2008), Xu Y (2014), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	14
SMARCA5	4	CHD3	19	biochemical	Hakimi MA (2002)	1
TAL1	0	CHD3	19	affinity chromatography technology, two hybrid	Hu X (2009), Goehler H (2004)	2
CSTF2	2	CPSF1	6	affinity chromatography technology, biochemical	Takagaki Y (2000), Wan C (2015)	2
MBD3	4	CHD4	22	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Sakai H (2002), Cui S (2011), Havugimana PC (2012), Quan J (2014)	4
PLK4	1	CHD3	19	two hybrid	Vinayagam A (2011)	1
BCL6	6	CHD3	19	affinity chromatography technology, affinity chromatography technology, pull down	Fujita N (2004), Fujita N (2004), Fujita N (2004)	3
PSME1	1	PSMD14	3	affinity chromatography technology, affinity chromatography technology	Berko D (2014), Wang X (2007)	2
TRIM25	5	CTBP1	2	affinity chromatography technology	Choudhury NR (2017)	1
KDM5B	27	MTA3	3	affinity chromatography technology	Li Q (2011)	1
TP53	0	HNRNPL	3	affinity chromatography technology	Horikawa I (2014)	1
CSTF2	2	IMMT	0	two hybrid	Stelzl U (2005)	1
PUF60	16	VIM	0	two hybrid	Stelzl U (2005)	1
PCNT	10	RBBP7	1	affinity chromatography technology	Sillibourne JE (2007)	1
SUMO2	0	RBBP7	1	pull down	Ouyang J (2009)	1
AIMP2	0	LUC7L2	0	two hybrid	Vinayagam A (2011)	1
HNRNPL	3	ZNF827	2	affinity chromatography technology	Fei T (2017)	1
RBBP7	1	GATAD2A	3	pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gong Z (2006), Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	5
CDK2AP1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Bantscheff M (2011), Joshi P (2013), Hein MY (2015)	4
CHD3	19	SUMO1	0	two hybrid, pull down	Minty A (2000), Goodarzi AA (2011)	2
SLC27A6	2	CHD3	19	two hybrid	Stelzl U (2005)	1
TAF6	4	SMARCC2	9	affinity chromatography technology	Nakamura T (2002)	1
SUMO2	0	PIAS4	5	pull down, two hybrid, two hybrid, pull down, pull down	Goehler H (2004), Goehler H (2004), Hecker CM (2006), Ullmann R (2012), Ouyang J (2009)	5
PHF20L1	4	MBD3	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
KPNB1	3	PTN	0	two hybrid	Goehler H (2004)	1
KDM1A	2	HDAC3	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Bantscheff M (2011), Joshi P (2013), Joshi P (2013)	4
SIRT1	3	HIST1H3A	3	enzymatic study	Das C (2009)	1
CHD4	22	MTA3	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Kwintkiewicz J (2011), Kwintkiewicz J (2011), Bantscheff M (2011), Wan C (2015)	4
MBD3	4	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical	Sakai H (2002), Noh EJ (2009), Noh EJ (2009), Sun JM (2007), Adenuga D (2010), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	9
SOX2	4	CHD4	22	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Engelen E (2011)	2
CSNK2A1	15	SMARCC2	9	enzymatic study	Zhang M (2011)	1
UHRF2	1	MBD3	4	affinity chromatography technology	Lai M (2016)	1
MBD3L1	0	SIN3A	13	affinity chromatography technology	Jiang CL (2004)	1
SNW1	0	SKIL	3	genetic interference	Leong GM (2001)	1
TRIM25	5	PTPRS	15	affinity chromatography technology	Choudhury NR (2017)	1
GPS2	0	TP53	0	affinity chromatography technology, pull down	Peng YC (2001), Peng YC (2001)	2
ZNF219	3	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	3
SKIL	3	CHD3	19	two hybrid	Colland F (2004)	1
MCM2	3	CHD3	19	affinity chromatography technology	Drissi R (2015)	1
PHF6	1	RBBP7	1	affinity chromatography technology	Todd MA (2012)	1
CHD3	19	RBBP4	3	affinity chromatography technology, biochemical, affinity chromatography technology	Xue Y (1998), Havugimana PC (2012), Hauri S (2016)	3
KPNB1	3	SUMO1	0	affinity chromatography technology	Hein MY (2015)	1
SATB1	1	CTBP1	2	pull down, affinity chromatography technology, affinity chromatography technology	Purbey PK (2009), Purbey PK (2009), Purbey PK (2009)	3
HIST1H3A	3	GATAD2A	3	pull down	Brackertz M (2006)	1
PSMD14	3	CHD3	19	affinity chromatography technology	Hein MY (2015)	1
UBE2I	0	HDAC1	4	enzymatic study	Citro S (2013)	1
TNFRSF14	2	VIM	0	two hybrid	Stelzl U (2005)	1
IMMT	0	PIAS4	5	two hybrid	Goehler H (2004)	1
EPOP	0	HDAC2	1	affinity chromatography technology	Hauri S (2016)	1
SNW1	0	KPNB1	3	affinity chromatography technology	Lleres D (2010)	1
RGS2	2	CHD3	19	two hybrid	Vinayagam A (2011)	1
CSNK2A1	15	SRRT	5	enzymatic study	Zhang M (2011)	1
HDAC1	4	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, affinity chromatography technology	Hakimi MA (2002), Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Fischle W (2002), Johnson CA (2002), Fischle W (2001), Fischer DD (2002), Fischer DD (2002), Ashburner BP (2001), Zhang Y (1999), Tong JK (1998), Tong JK (1998), Hassig CA (1998), Hassig CA (1998), Zhang Y (1997), van der Vlag J (1999), van der Vlag J (1999), Noh EJ (2009), Noh EJ (2009), Galasinski SC (2002), Galasinski SC (2002), Galasinski SC (2002), He S (2005), Humphrey GW (2001), Park JH (2004), Park JH (2004), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Martinez FP (2012), Martinez FP (2012), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Joshi P (2013), Schnur N (2007), Schnur N (2007), Oh YM (2009), Wan C (2015), Hein MY (2015), Chen TC (2014), Huttlin EL (2017)	48
SNW1	0	CPSF1	6	affinity chromatography technology	Lleres D (2010)	1
CSNK2A1	15	CD2BP2	0	enzymatic study	Zhang M (2011)	1
HYPK	2	VIM	0	affinity chromatography technology, affinity chromatography technology	Choudhury KR (2012), Choudhury KR (2012)	2
MCM2	3	TRIM25	5	affinity chromatography technology	Drissi R (2015)	1
BMI1	0	SMARCA2	17	affinity chromatography technology	Cao Q (2014)	1
UBC	7	HNRNPL	3	affinity chromatography technology	Matsumoto M (2005)	1
JUN	0	CHD3	19	affinity chromatography technology	Aguilera C (2011)	1
IVNS1ABP	0	VIM	0	two hybrid	Stelzl U (2005)	1
HIST1H3A	3	MTA2	1	affinity chromatography technology	Nishioka K (2002)	1
CREB1	1	CHD3	19	two hybrid	Stelzl U (2005)	1
CTBP1	2	CHD4	22	affinity chromatography technology	Huttlin EL (2017)	1
HYPK	2	HTT	14	two hybrid, two hybrid, affinity chromatography technology	Faber PW (1998), Faber PW (1998), Choudhury KR (2012)	3
PHF20L1	4	GATAD2B	15	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SOX2	4	MTA1	3	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
SIRT1	3	SATB1	1	affinity chromatography technology, affinity chromatography technology, imaging technique, enzymatic study	Xue Z (2012), Xue Z (2012), Xue Z (2012), Xue Z (2012)	4
NR1H2	2	KDM1A	2	affinity chromatography technology, two hybrid	Weimann M (2013), Weimann M (2013)	2
TP53	0	SMARCA5	4	affinity chromatography technology	Li X (2015)	1
CHD3	19	PRPF40A	5	pull down, two hybrid	Goehler H (2004), Goehler H (2004)	2
FOXA1	2	LUC7L2	0	affinity chromatography technology	Jozwik KM (2016)	1
CSNK2A1	15	HDAC2	1	enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, biochemical, enzymatic study, biochemical	Sun JM (2002), Sun JM (2007), Adenuga D (2010), Tsai SC (2002), Havugimana PC (2012), Zhang M (2011), Wan C (2015)	7
CHD3	19	TP73	2	two hybrid	Minty A (2000)	1
RGS2	2	UBC	7	two hybrid	Vinayagam A (2011)	1
NXF1	0	HDAC2	1	affinity chromatography technology	Castello A (2012)	1
VIM	0	ZHX1	1	two hybrid	Goehler H (2004)	1
GPS2	0	HDAC1	4	pull down, affinity chromatography technology	Sanyal S (2007), Sanyal S (2007)	2
IKZF1	2	CHD3	19	pull down, two hybrid, affinity chromatography technology	Kim J (1999), Kim J (1999), Huttlin EL (2017)	3
MTA3	3	CHD3	19	affinity chromatography technology, biochemical	Fujita N (2003), Wan C (2015)	2
SMARCA5	4	SATB1	1	pull down, pull down	Yasui D (2002), Yasui D (2002)	2
BRD1	5	VIM	0	two hybrid	Stelzl U (2005)	1
SIN3A	13	IKZF1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), Koipally J (1999), Koipally J (2002), Koipally J (2002)	4
AIMP2	0	CHD3	19	two hybrid	Vinayagam A (2011)	1
RPL10	3	HDAC2	1	affinity chromatography technology	Hein MY (2015)	1
SMARCA2	17	BARD1	4	affinity chromatography technology	Fontana GA (2017)	1
FABP4	3	CHD3	19	two hybrid	Vinayagam A (2011)	1
SERBP1	2	CHD3	19	two hybrid, pull down, pull down, two hybrid	Lemos TA (2003), Lemos TA (2003), Lemos TA (2003), Stelzl U (2005)	4
HABP4	1	VIM	0	two hybrid	Stelzl U (2005)	1
SPOP	1	CHD3	19	two hybrid	Zhang P (2017)	1
HSD17B10	1	SERBP1	2	affinity chromatography technology	Malty RH (2017)	1
HIST1H3A	3	CREB1	1	affinity chromatography technology	Sun HS (2003)	1
TAL1	0	BRD1	5	affinity chromatography technology	Goardon N (2006)	1
FOXA1	2	PHF6	1	affinity chromatography technology	Jozwik KM (2016)	1
RPL10	3	SMARCA5	4	affinity chromatography technology	Hein MY (2015)	1
NXF1	0	SNRNP40	1	affinity chromatography technology	Castello A (2012)	1
JUN	0	SMARCC2	9	affinity chromatography technology	Li X (2015)	1
TRIM25	5	DDX5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017), Choudhury NR (2017)	3
SPOP	1	BMI1	0	affinity chromatography technology	Hernandez-Munoz I (2005)	1
HSD17B10	1	KPNB1	3	affinity chromatography technology	Malty RH (2017)	1
MYB	3	SIN3A	13	pull down, affinity chromatography technology, pull down	Nomura T (2004), Nomura T (2004), Nomura T (2004)	3
BRD1	5	CHD4	22	affinity chromatography technology	Fryland T (2016)	1
CHD3	19	HTT	14	pull down, two hybrid	Goehler H (2004), Goehler H (2004)	2
UBC	7	SUMO1	0	affinity chromatography technology	Sahin U (2014)	1
HSFY1	0	CHD4	22	affinity chromatography technology	Huttlin EL (2017)	1
MTA3	3	GATAD2B	15	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Bantscheff M (2011), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	4
SATB1	1	MTA2	1	biochemical, affinity chromatography technology	Yasui D (2002), Yasui D (2002)	2
BMI1	0	HIST1H2BB	3	affinity chromatography technology	Cao Q (2014)	1
BARD1	4	KPNB1	3	affinity chromatography technology	Woods NT (2012)	1
SOX2	4	BMI1	0	affinity chromatography technology	Cox JL (2013)	1
TRIM25	5	FUBP1	1	affinity chromatography technology	Choudhury NR (2017)	1
CHD3	19	METAP2	3	biochemical	Wan C (2015)	1
IVNS1ABP	0	HSF1	1	affinity chromatography technology	Boldt K (2016)	1
HNRNPL	3	FUBP1	1	affinity chromatography technology	Fei T (2017)	1
CTBP1	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Koipally J (2000), Glasspool RM (2005), Kuppuswamy M (2008), Kuppuswamy M (2008), Mendez LM (2008)	5
TNFRSF14	2	CHD3	19	two hybrid	Stelzl U (2005)	1
SUMO2	0	VIM	0	two hybrid, two hybrid	Stelzl U (2005), Vinayagam A (2011)	2
HDAC1	4	UHRF2	1	affinity chromatography technology, affinity chromatography technology, far western blotting, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Unoki M (2004), Unoki M (2004), Mori T (2011), Zeng S (2017), Zeng S (2017), Lai M (2016)	6
TRIM25	5	BRD1	5	affinity chromatography technology	Choudhury NR (2017)	1
HNRNPL	3	PTPRS	15	affinity chromatography technology	Fei T (2017)	1
PHF6	1	CHD3	19	affinity chromatography technology	Todd MA (2012)	1
MBD3L1	0	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
CHD3	19	RBBP7	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
FOXA1	2	SUMO1	0	affinity chromatography technology	Jozwik KM (2016)	1
UHRF2	1	HIST1H3A	3	unspecified method, affinity chromatography technology	Zhang J (2011), Zhang T (2017)	2
MBD3L1	0	MBD2	1	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Jiang CL (2004), Jiang CL (2004), Jiang CL (2004)	4
SAFB	3	CHD3	19	two hybrid	Stelzl U (2005)	1
UBA3	0	CHD3	19	two hybrid	Stelzl U (2005)	1
TP53	0	PIAS4	5	two hybrid	Goehler H (2004)	1
SOX2	4	SIN3A	13	affinity chromatography technology	Engelen E (2011)	1
IVNS1ABP	0	LUC7L2	0	biochemical	Kristensen AR (2012)	1
TAF6	4	CHD3	19	affinity chromatography technology	Nakamura T (2002)	1
HDAC3	5	IKZF1	2	affinity chromatography technology	Koipally J (2002)	1
CRCT1	1	VIM	0	two hybrid	Stelzl U (2005)	1
HDAC2	1	GATAD2A	3	biochemical, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013)	3
PSME1	1	CHD3	19	two hybrid	Stelzl U (2005)	1
FOXA1	2	CHD4	22	affinity chromatography technology	Jozwik KM (2016)	1
EPOP	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
CCDC8	1	CHD4	22	affinity chromatography technology	Hanson D (2014)	1
SIN3A	13	MBD3	4	affinity chromatography technology	Nakamura T (2002)	1
RAD21	3	MCM2	3	affinity chromatography technology	Panigrahi AK (2011)	1
MTA1	3	SIN3A	13	affinity chromatography technology	Yao YL (2003)	1
LGR4	3	UBC	7	affinity chromatography technology	Carmon KS (2014)	1
NAB2	2	CHD4	22	affinity chromatography technology, affinity chromatography technology	Srinivasan R (2006), Srinivasan R (2006)	2
UROD	2	CHD3	19	two hybrid	Vinayagam A (2011)	1
UROD	2	VIM	0	two hybrid	Vinayagam A (2011)	1
SOX2	4	TP73	2	affinity chromatography technology	Cox JL (2013)	1
HDAC3	5	GPS2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang J (2002), Zhang J (2002), Zhang J (2002), Sanyal S (2007), Sanyal S (2007), Bantscheff M (2011), Joshi P (2013), Bi H (2014), Huttlin EL (2015), Huttlin EL (2017)	10
NXF1	0	DDX5	2	affinity chromatography technology	Castello A (2012)	1
HSD17B10	1	PCMT1	1	affinity chromatography technology	Malty RH (2017)	1
PHF20L1	4	MTA2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
GSK3B	1	PTN	0	two hybrid	Vinayagam A (2011)	1
BMI1	0	TRIM25	5	affinity chromatography technology	Cao Q (2014)	1
HSF1	1	MTA1	3	pull down, affinity chromatography technology, affinity chromatography technology	Khaleque MA (2008), Khaleque MA (2008), Khaleque MA (2008)	3
RAD51	3	SUMO1	0	two hybrid	Shen Z (1996)	1
HDAC1	4	KDM1A	2	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Hakimi MA (2003), You A (2001), You A (2001), Shi YJ (2005), Lee MG (2005), Humphrey GW (2001), Humphrey GW (2001), Humphrey GW (2001), Godmann M (2007), Godmann M (2007), Terhune SS (2010), Godmann M (2010), Godmann M (2010), Wang Y (2009), Nicholson TB (2011), Li Q (2011), Cui S (2011), Cui S (2011), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Wang Q (2016), Huttlin EL (2017)	26
SUMO2	0	TRIM28	1	pull down	Ouyang J (2009)	1
TRIM25	5	GATAD2A	3	affinity chromatography technology	Choudhury NR (2017)	1
BARD1	4	CHD3	19	pull down, two hybrid	Goehler H (2004), Goehler H (2004)	2
CCDC8	1	CHD3	19	affinity chromatography technology	Hanson D (2014)	1
CRCT1	1	LRIF1	3	two hybrid	Stelzl U (2005)	1
GIT1	10	HTT	14	pull down, pull down, affinity chromatography technology, two hybrid	Goehler H (2004), Goehler H (2004), Goehler H (2004), Goehler H (2004)	4
MX1	0	SUMO1	0	two hybrid, two hybrid, affinity chromatography technology	Engelhardt OG (2001), Brantis-de-Carvalho CE (2015), Brantis-de-Carvalho CE (2015)	3
CCDC8	1	UBC	7	affinity chromatography technology	Hanson D (2014)	1
UBC	7	PSMD14	3	affinity chromatography technology, pull down	Matsumoto M (2005), Zhang X (2017)	2
CHD4	22	RBBP4	3	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Cui S (2011), Cui S (2011), Havugimana PC (2012), Wan C (2015), Hauri S (2016)	9
SNW1	0	VIM	0	affinity chromatography technology	Lleres D (2010)	1
LGR4	3	KMT2A	58	affinity chromatography technology	Carmon KS (2014)	1
SUMO2	0	MTA1	3	pull down	Ouyang J (2009)	1
SAT1	0	LUC7L2	0	two hybrid	Stelzl U (2005)	1
RNF2	1	LUC7L2	0	affinity chromatography technology	Cao Q (2014)	1
KMT2A	58	SMARCA2	17	affinity chromatography technology	Nakamura T (2002)	1
TP53	0	PCMT1	1	affinity chromatography technology	Fogeron ML (2013)	1
KDM1A	2	MBD3	4	affinity chromatography technology, affinity chromatography technology, two hybrid	Wang Y (2009), Li Q (2011), Weimann M (2013)	3
IKZF1	2	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), ONeill DW (2000), ONeill DW (2000), Huttlin EL (2017)	4
CHD4	22	SIN3A	13	affinity chromatography technology	Zhang Y (1998)	1
BMI1	0	RNF2	1	biochemical, pull down, affinity chromatography technology, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, biochemical, pull down, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Cao R (2005), Cao R (2005), Ben-Saadon R (2006), Li Z (2006), Maertens GN (2009), Wei J (2006), Gao Z (2012), Gao Z (2012), Gao Z (2012), Gao Z (2012), Pan MR (2011), Pan MR (2011), Voncken JW (2005), Woodsmith J (2012), Voncken JW (2003), Woodsmith J (2012), Li Z (2006), Li Z (2006), McGinty RK (2014), Cao Q (2014), Cao Q (2014), Hein MY (2015), Balasubramanian S (2015), Taherbhoy AM (2015), Taherbhoy AM (2015), Abdouh M (2016), Sanchez A (2016), Wheaton K (2017), Hauri S (2016), Hauri S (2016)	30
SUMO1	0	TP53	0	two hybrid	Minty A (2000)	1
CHD4	22	PCNT	10	two hybrid, affinity chromatography technology, affinity chromatography technology	Sillibourne JE (2007), Sillibourne JE (2007), Sillibourne JE (2007)	3
KDM1A	2	SIN3A	13	affinity chromatography technology	You A (2001)	1
MTA3	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
SIRT1	3	JUN	0	affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology	Gao Z (2008), Zhang R (2010), Zhang R (2010), Armour SM (2013)	4
ZNF827	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Conomos D (2014), Conomos D (2014)	2
SNW1	0	SNRNP40	1	affinity chromatography technology	Lleres D (2010)	1
CCDC8	1	HDAC2	1	affinity chromatography technology	Hanson D (2014)	1
PHF20L1	4	MTA3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TP73	2	TRIM28	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Satija YK (2016), Satija YK (2016), Satija YK (2016), Satija YK (2016)	4
TWIST1	0	MTA2	1	affinity chromatography technology, affinity chromatography technology, pull down, imaging technique	Fu J (2011), Fu J (2011), Fu J (2011), Fu J (2012)	4
NR4A1	4	CHD4	22	affinity chromatography technology	Rambaud J (2009)	1
MTA3	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Fujita N (2003), Kwintkiewicz J (2011), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	8
SUMO2	0	HDAC2	1	pull down	Ouyang J (2009)	1
BARD1	4	PRPF40A	5	affinity chromatography technology	Woods NT (2012)	1
ZNF827	2	MTA1	3	affinity chromatography technology	Conomos D (2014)	1
RNF2	1	MTA1	3	affinity chromatography technology	Cao Q (2014)	1
HSD17B10	1	TRIM28	1	affinity chromatography technology	Malty RH (2017)	1
SIRT6	2	VIM	0	two hybrid, two hybrid	Stelzl U (2005), Vinayagam A (2011)	2
TP53	0	MTA1	3	pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Yao YL (2003), Li DQ (2010), Moon HE (2007), Moon HE (2007), Li DQ (2009), Li DQ (2009)	6
CHD3	19	HABP4	1	pull down, two hybrid, two hybrid	Lemos TA (2003), Stelzl U (2005), Nery FC (2006)	3
HDAC2	1	SNW1	0	two hybrid, two hybrid	Zhou S (2000), Zhou S (2000)	2
TSC22D1	1	LRIF1	3	two hybrid	Vinayagam A (2011)	1
PHF20L1	4	CHD3	19	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
DDX5	2	HDAC3	5	affinity chromatography technology, affinity chromatography technology	Mooney SM (2010), Mooney SM (2010)	2
KMT2A	58	SMARCC2	9	affinity chromatography technology	Nakamura T (2002)	1
ZNF219	3	CHD3	19	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD3	19	NEFL	1	two hybrid	Goehler H (2004)	1
KMT2A	58	BMI1	0	pull down	Xia ZB (2003)	1
ZNF827	2	GATAD2B	15	affinity chromatography technology, affinity chromatography technology	Conomos D (2014), Conomos D (2014)	2
KMT2A	58	TAF6	4	biochemical, affinity chromatography technology	Havugimana PC (2012), Nakamura T (2002)	2
HIST1H3A	3	RBBP7	1	affinity chromatography technology	Foltz DR (2009)	1
CHD3	19	DDX5	2	affinity chromatography technology	Carter CL (2010)	1
CCDC8	1	KPNB1	3	affinity chromatography technology	Hanson D (2014)	1
CHD3	19	SMARCC2	9	biochemical	Havugimana PC (2012)	1
CTTN	1	CHD3	19	two hybrid	Stelzl U (2005)	1
KDM5B	27	RBBP7	1	affinity chromatography technology	Li Q (2011)	1
KDM1A	2	HIST1H3A	3	enzymatic study, unspecified method, enzymatic study, enzymatic study, enzymatic study, enzymatic study	Chen Y (2006), Forneris F (2005), Shi YJ (2005), Lee MG (2005), Metzger E (2010), Lin Y (2010)	6
HNRNPL	3	PHF6	1	affinity chromatography technology	Fei T (2017)	1
PIAS4	5	HDAC2	1	pull down	Gross M (2004)	1
JUN	0	SATB1	1	affinity chromatography technology	Li X (2015)	1
BHLHE40	5	ENO1	3	two hybrid	Wang J (2011)	1
CSNK2A1	15	NXF1	0	enzymatic study	Zhang M (2011)	1
MCM2	3	IVNS1ABP	0	affinity chromatography technology	Boldt K (2016)	1
TNNT1	0	VIM	0	two hybrid	Vinayagam A (2011)	1
LUC7L2	0	MOV10	6	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PSME1	1	VIM	0	two hybrid	Stelzl U (2005)	1
MCM2	3	PCMT1	1	affinity chromatography technology	Drissi R (2015)	1
CHD3	19	CHD3	19	affinity chromatography technology, two hybrid	Xue Y (1998), Goehler H (2004)	2
RNF2	1	TRIM25	5	affinity chromatography technology	Cao Q (2014)	1
UBC	7	TRIM28	1	affinity chromatography technology, enzymatic study	Matsumoto M (2005), Doyle JM (2010)	2
RAD21	3	KPNB1	3	affinity chromatography technology	Panigrahi AK (2011)	1
CHD3	19	CD2BP2	0	biochemical	Wan C (2015)	1
HDAC1	4	ADH5	1	affinity chromatography technology	Joshi P (2013)	1
UBE2I	0	PUF60	16	two hybrid	Rolland T (2014)	1
TP53	0	CTBP1	2	affinity chromatography technology, affinity chromatography technology	Jin W (2008), Jin W (2008)	2
PHF20L1	4	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TAF6	4	HDAC1	4	affinity chromatography technology	Nakamura T (2002)	1
KDM5B	27	MBD3	4	affinity chromatography technology, pull down	Li Q (2011), Li Q (2011)	2
HTT	14	TP53	0	pull down, affinity chromatography technology	Steffan JS (2000), Steffan JS (2000)	2
SNW1	0	SIN3A	13	pull down	Zhou S (2000)	1
SIRT1	3	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology	Zhao W (2008), Liu X (2011), Inoue Y (2011), Jain AK (2012), Langley E (2002), Langley E (2002), Langley E (2002), Kim JE (2008), Kim JE (2008), Kim EJ (2007), Kim EJ (2007), Busch F (2012), Busch F (2012), Hasegawa K (2008), Hasegawa K (2008), Hasegawa K (2008), Zannini L (2012)	17
TRIM25	5	MTA1	3	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Zang HL (2017)	2
IVNS1ABP	0	SHMT2	3	biochemical	Kristensen AR (2012)	1
KDM5B	27	KDM1A	2	affinity chromatography technology, pull down	Li Q (2011), Li Q (2011)	2
RBBP4	3	RBBP7	1	biochemical, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Kristensen AR (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	7
HDAC3	5	BCL6	6	imaging technique, affinity chromatography technology, affinity chromatography technology	Xu F (2016), Xu F (2016), Xu F (2016)	3
LUC7L2	0	CHD3	19	two hybrid	Stelzl U (2005)	1
SOX2	4	MBD3	4	affinity chromatography technology	Engelen E (2011)	1
RNF2	1	SNW1	0	affinity chromatography technology	Cao Q (2014)	1
ZNF219	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MTA3	3	MBD3	4	affinity chromatography technology, biochemical	Fujita N (2003), Wan C (2015)	2
SUMO1	0	HSF1	1	enzymatic study	Ishihara K (2012)	1
SNW1	0	PUF60	16	affinity chromatography technology	Lleres D (2010)	1
FOXA1	2	RPL10	3	affinity chromatography technology	Jozwik KM (2016)	1
SNW1	0	RBBP7	1	affinity chromatography technology	Lleres D (2010)	1
SIRT1	3	CREB1	1	affinity chromatography technology	Armour SM (2013)	1
TNNT1	0	SNW1	0	two hybrid	Vinayagam A (2011)	1
HNRNPL	3	BARD1	4	affinity chromatography technology	Fei T (2017)	1
UBE2I	0	BMI1	0	two hybrid	Markson G (2009)	1
UBE2I	0	TP73	2	two hybrid	Minty A (2000)	1
MCM2	3	VIM	0	affinity chromatography technology	Drissi R (2015)	1
ENO1	3	HDAC2	1	affinity chromatography technology	Castello A (2012)	1
RAD21	3	RPL10	3	two hybrid	Panigrahi AK (2011)	1
HIST1H3A	3	BARD1	4	bioid, affinity chromatography technology	Lambert JP (2015), Wu W (2015)	2
FOXA1	2	RBBP4	3	affinity chromatography technology	Jozwik KM (2016)	1
CTBP1	2	IKZF1	2	pull down, affinity chromatography technology, two hybrid, two hybrid, two hybrid	Koipally J (2000), Koipally J (2000), Vinayagam A (2011), Corominas R (2014), Rolland T (2014)	5
UBE2I	0	ZHX1	1	two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology	Wang J (2011), Chen S (2013), Chen S (2013), Chen S (2013)	4
SMARCA2	17	CHD3	19	affinity chromatography technology	Nakamura T (2002)	1
HIC1	1	SIRT1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Stankovic-Valentin N (2007), Dehennaut V (2012), Dehennaut V (2012), Chen WY (2005), Dehennaut V (2013)	5
PHF20L1	4	HDAC2	1	affinity chromatography technology	Huttlin EL (2017)	1
DDX5	2	PRPF40A	5	biochemical	Havugimana PC (2012)	1
SATB1	1	SUMO1	0	two hybrid	Tan JA (2008)	1
PIAS4	5	HIC1	1	imaging technique	Sun L (2013)	1
SUMO2	0	HDAC1	4	pull down	Ouyang J (2009)	1
NXF1	0	KPNB1	3	pull down, pull down, affinity chromatography technology, affinity chromatography technology	Zhang ZC (2011), Zhang ZC (2011), Bachi A (2000), Hein MY (2015)	4
TXNDC9	0	IMMT	0	two hybrid	Stelzl U (2005)	1
PHF6	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Todd MA (2012), Todd MA (2012)	2
NR4A1	4	CHD3	19	two hybrid	Vinayagam A (2011)	1
CHD3	19	IMMT	0	two hybrid, two hybrid	Stelzl U (2005), Goehler H (2004)	2
TRIM25	5	PAICS	0	affinity chromatography technology	Choudhury NR (2017)	1
CSNK2A1	15	SERBP1	2	enzymatic study	Zhang M (2011)	1
NXF1	0	CD2BP2	0	affinity chromatography technology	Castello A (2012)	1
ZHX1	1	PRPF40A	5	two hybrid	Goehler H (2004)	1
HNRNPL	3	CHD6	6	affinity chromatography technology	Fei T (2017)	1
CSNK2A1	15	HDAC1	4	enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology	Pflum MK (2001), Cai R (2001), Sun JM (2007), Zhang M (2011), Joshi P (2013)	5
BMI1	0	PTN	0	two hybrid	Stelzl U (2005)	1
FOXA1	2	SATB1	1	affinity chromatography technology	Li X (2015)	1
PUF60	16	PRPF40A	5	biochemical	Wan C (2015)	1
SATB1	1	HDAC1	4	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yasui D (2002), Yasui D (2002), Yasui D (2002), Pavan Kumar P (2006), Pavan Kumar P (2006), Kumar PP (2005)	6
SOX2	4	MBD2	1	affinity chromatography technology	Cox JL (2013)	1
MBD2	1	MTA2	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Zhang Y (1999), Feng Q (2001), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Wan C (2015)	6
PUF60	16	HNRNPL	3	affinity chromatography technology	Ewing RM (2007)	1
PIAS4	5	PRPF40A	5	two hybrid	Goehler H (2004)	1
TWIST1	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, pull down	Fu J (2011), Fu J (2011), Fu J (2011)	3
RNF2	1	GATAD2B	15	affinity chromatography technology	Cao Q (2014)	1
TXNDC9	0	PTN	0	two hybrid	Stelzl U (2005)	1
UBC	7	PHF20L1	4	pull down	Nathan JA (2013)	1
TRIM25	5	HNRNPL	3	affinity chromatography technology	Choudhury NR (2017)	1
MTA1	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Roche AE (2008), Huttlin EL (2015), Huttlin EL (2017), Millard CJ (2016), Hauri S (2016)	6
TWIST1	0	VIM	0	imaging technique	Govindarajalu G (2018)	1
MBD3	4	RBBP7	1	pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1999), Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	5
UHRF2	1	LUC7L2	0	affinity chromatography technology	Lai M (2016)	1
SOX2	4	MTA3	3	affinity chromatography technology	Cox JL (2013)	1
SMARCC2	9	HDAC1	4	affinity chromatography technology	Battaglioli E (2002)	1
CDK2AP1	1	MBD2	1	affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Hein MY (2015)	2
MOV10	6	HDAC2	1	affinity chromatography technology	Castello A (2012)	1
HIST1H3A	3	SMARCA2	17	pull down, pull down	Lavigne M (2009), Lavigne M (2009)	2
SIN3A	13	CHD3	19	affinity chromatography technology	Nakamura T (2002)	1
MTA1	3	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Xue Y (1998), Cui S (2011), Cui S (2011), Chudnovsky Y (2014), Wan C (2015)	6
HYPK	2	SRRT	5	affinity chromatography technology	Choudhury KR (2012)	1
NXF1	0	EPOP	0	affinity chromatography technology	Castello A (2012)	1
LGR4	3	CHD3	19	affinity chromatography technology	Carmon KS (2014)	1
NXF1	0	SIN3A	13	affinity chromatography technology	Castello A (2012)	1
CSNK2A1	15	KDM1A	2	affinity chromatography technology	Peng B (2015)	1
SOX2	4	SUMO1	0	two hybrid	Rolland T (2014)	1
ZNF827	2	MTA2	1	affinity chromatography technology, affinity chromatography technology	Conomos D (2014), Conomos D (2014)	2
GSK3B	1	ZHX1	1	two hybrid	Vinayagam A (2011)	1
RAD51	3	CHD3	19	two hybrid	Stelzl U (2005)	1
KMT2A	58	RBBP4	3	affinity chromatography technology	Nakamura T (2002)	1
CCDC8	1	HNRNPL	3	affinity chromatography technology	Hanson D (2014)	1
GSK3B	1	CREB1	1	enzymatic study	Li B (2003)	1
MOV10	6	RPL10	3	biochemical	Havugimana PC (2012)	1
ZNF219	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PLK4	1	PCNT	10	bioid	Firat-Karalar EN (2014)	1
SNW1	0	CHD3	19	affinity chromatography technology	Lleres D (2010)	1
CSNK2A1	15	HDAC3	5	enzymatic study, affinity chromatography technology	Zhang X (2005), Rajendran P (2011)	2
RAD21	3	MTA3	3	affinity chromatography technology	Kwintkiewicz J (2011)	1
TSC22D1	1	TP53	0	two hybrid, affinity chromatography technology	Yoon CH (2012), Yoon CH (2012)	2
CASP8	1	VIM	0	two hybrid	Stelzl U (2005)	1
RBBP4	3	HDAC3	5	pull down, pull down	Nicolas E (2001), Nicolas E (2001)	2
SIRT6	2	MTA2	1	affinity chromatography technology	Simeoni F (2013)	1
CASP8	1	SOX2	4	two hybrid	Arroyo R (2015)	1
PIAS4	5	HTT	14	pull down, two hybrid	Goehler H (2004), Goehler H (2004)	2
IK	6	CHD3	19	two hybrid	Stelzl U (2005)	1
RNF2	1	CHD3	19	affinity chromatography technology	Cao Q (2014)	1
KDM5B	27	SMARCC2	9	affinity chromatography technology	Zhou W (2009)	1
RNF2	1	RPL29	0	affinity chromatography technology	Cao Q (2014)	1
MBD3L1	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
CPE	2	CHD3	19	two hybrid	Stelzl U (2005)	1
BMI1	0	KPNB1	3	affinity chromatography technology	Abdouh M (2016)	1
IKZF1	2	MTA3	3	affinity chromatography technology	Huttlin EL (2017)	1
GSK3B	1	CHD3	19	two hybrid	Vinayagam A (2011)	1
CDK2AP1	1	CHD4	22	affinity chromatography technology	Hein MY (2015)	1
SOX2	4	SMARCC2	9	affinity chromatography technology	Engelen E (2011)	1
JUN	0	HDAC1	4	affinity chromatography technology	Tenbrock K (2006)	1
CASP8	1	CHD3	19	two hybrid	Stelzl U (2005)	1
MTA2	1	CHD3	19	biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical	Zhang Y (1999), Feng Q (2001), Wang Y (2009), Havugimana PC (2012), Wan C (2015)	5
KPNB1	3	PIAS4	5	two hybrid	Goehler H (2004)	1
MCM2	3	PSME1	1	affinity chromatography technology	Drissi R (2015)	1
ZNF827	2	RBBP7	1	affinity chromatography technology, affinity chromatography technology, imaging technique	Conomos D (2014), Conomos D (2014), Conomos D (2014)	3
MBD3	4	SMARCA5	4	biochemical	Havugimana PC (2012)	1
NXF1	0	THOC7	0	affinity chromatography technology	Castello A (2012)	1
SNW1	0	PRPF40A	5	affinity chromatography technology	Lleres D (2010)	1
SOX2	4	CHD3	19	affinity chromatography technology	Cox JL (2013)	1
SIRT1	3	TRIM28	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study	Lin Z (2012), Lin YH (2015), Lin YH (2015), Lin YH (2015)	4
SOX2	4	CTBP1	2	affinity chromatography technology	Engelen E (2011)	1
SIN3A	13	CSNK2A1	15	affinity chromatography technology, affinity chromatography technology, biochemical, biochemical	Sun JM (2007), Sun JM (2007), Havugimana PC (2012), Wan C (2015)	4
SIRT1	3	SNW1	0	two hybrid, pull down, affinity chromatography technology	Kang MR (2010), Kang MR (2010), Kang MR (2010)	3
TRIM28	1	VIM	0	two hybrid	Stelzl U (2005)	1
SIN3A	13	TAF6	4	affinity chromatography technology, affinity chromatography technology	Nakamura T (2002), Nakamura T (2002)	2
CCDC8	1	PCNT	10	affinity chromatography technology	Hanson D (2014)	1
ZNF827	2	GATAD2A	3	affinity chromatography technology	Conomos D (2014)	1
HDAC2	1	KDM1A	2	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, genetic interference	Hakimi MA (2002), Hakimi MA (2003), Hakimi MA (2003), Hakimi MA (2003), Tong JK (1998), Lee MG (2005), Humphrey GW (2001), Humphrey GW (2001), Zibetti C (2010), Wang Y (2009), Li Q (2011), Cui S (2011), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Wong AS (2016)	17
KDM1A	2	TP53	0	affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study	Tsai WW (2008), Tsai WW (2008), Huang J (2007), Huang J (2007), Huang J (2007), Huang J (2007), Huang J (2007)	7
CHD3	19	TWIST1	0	imaging technique	Fu J (2012)	1
MCM2	3	PUF60	16	affinity chromatography technology	Drissi R (2015)	1
LGR4	3	SRRT	5	affinity chromatography technology	Carmon KS (2014)	1
CREB1	1	RBBP4	3	two hybrid	Zhang Q (2000)	1
TAF6	4	MBD3	4	affinity chromatography technology	Nakamura T (2002)	1
IMMT	0	LRIF1	3	two hybrid	Goehler H (2004)	1
RNF2	1	KDM1A	2	affinity chromatography technology	Cao Q (2014)	1
HIST1H3A	3	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wysocka J (2006), Nishioka K (2002), Klement K (2014)	3
CD2BP2	0	SNW1	0	affinity chromatography technology	Cloutier P (2017)	1
SUMO1	0	MYB	3	pull down	Saether T (2011)	1
MBD3	4	MTA1	3	pull down, affinity chromatography technology, biochemical	Yildirim O (2011), Cui S (2011), Wan C (2015)	3
CSNK2A1	15	CHD4	22	enzymatic study	Zhang M (2011)	1
TAF6	4	RBBP7	1	affinity chromatography technology	Nakamura T (2002)	1
SAT1	0	PTN	0	two hybrid	Stelzl U (2005)	1
CHD6	6	CHD3	19	biochemical	Lutz T (2006)	1
KDM5B	27	RBBP4	3	affinity chromatography technology	Li Q (2011)	1
RAD21	3	UBC	7	affinity chromatography technology	Panigrahi AK (2011)	1
SHMT2	3	SMARCC2	9	affinity chromatography technology	Castello A (2012)	1
IVNS1ABP	0	CHD3	19	two hybrid	Stelzl U (2005)	1
MBD2	1	GATAD2A	3	affinity chromatography technology, pull down, pull down, biochemical, affinity chromatography technology	Brackertz M (2002), Brackertz M (2002), Brackertz M (2006), Wan C (2015), Huttlin EL (2017)	5
PTPRS	15	CHD3	19	two hybrid	Stelzl U (2005)	1
MTA2	1	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Cui S (2011), Wan C (2015)	4
CHD4	22	RBBP7	1	affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Havugimana PC (2012), Huttlin EL (2015), Quan J (2014), Huttlin EL (2017)	7
XRCC4	0	VIM	0	two hybrid	Stelzl U (2005)	1
PTN	0	PIAS4	5	two hybrid	Goehler H (2004)	1
GSK3B	1	LUC7L2	0	two hybrid	Vinayagam A (2011)	1
GADD45A	1	TP53	0	two hybrid	Vinayagam A (2011)	1
MTA2	1	KDM1A	2	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Wang Y (2009), Wang Y (2009), Wang Y (2009), Li Q (2011), Cui S (2011)	5
PHF20L1	4	MBD2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CREB1	1	UBE2I	0	two hybrid	Bandyopadhyay S (2010)	1
TRIM28	1	CHD3	19	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Stelzl U (2005), Goodarzi AA (2011), Goodarzi AA (2011), Ivanov AV (2007), Garvin AJ (2013)	5
HDAC3	5	TRIM28	1	affinity chromatography technology	Tsuruma R (2008)	1
MTA3	3	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Hein MY (2015)	2
BRD1	5	CHD3	19	affinity chromatography technology	Fryland T (2016)	1
BARD1	4	CSTF2	2	affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Kleiman FE (2001), Kleiman FE (2001), Kleiman FE (1999), Kleiman FE (1999), Cevher MA (2010)	5
CHD3	19	GATAD2A	3	biochemical, biochemical, affinity chromatography technology	Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	3
SUMO2	0	CHD3	19	two hybrid, two hybrid, two hybrid, unspecified method	Stelzl U (2005), Vinayagam A (2011), Goehler H (2004), Garvin AJ (2013)	4
MTA3	3	GATAD2A	3	affinity chromatography technology, biochemical, affinity chromatography technology	Bantscheff M (2011), Wan C (2015), Huttlin EL (2017)	3
NR4A1	4	TP53	0	affinity chromatography technology, pull down, pull down	Zhao BX (2006), Zhao BX (2006), Zhao BX (2006)	3
UHRF2	1	BMI1	0	affinity chromatography technology	Lai M (2016)	1
HNRNPL	3	AIMP2	0	affinity chromatography technology	Fei T (2017)	1
SMARCA5	4	RAD21	3	biochemical, biochemical	Hakimi MA (2002), Hakimi MA (2002)	2
PHF20L1	4	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SNW1	0	IK	6	affinity chromatography technology	Lleres D (2010)	1
BMI1	0	TRIM28	1	affinity chromatography technology	Cao Q (2014)	1
BARD1	4	MOV10	6	affinity chromatography technology	Woods NT (2012)	1
SOX2	4	GATAD2B	15	affinity chromatography technology	Engelen E (2011)	1
MBD3	4	JUN	0	affinity chromatography technology, pull down, pull down	Aguilera C (2011), Aguilera C (2011), Aguilera C (2011)	3
SRRT	5	VIM	0	two hybrid	Stelzl U (2005)	1
HDAC1	4	TP73	2	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Uramoto H (2004), Uramoto H (2004), Uramoto H (2004), Zhang J (2007)	4
BARD1	4	LUC7L2	0	affinity chromatography technology	Woods NT (2012)	1
HDAC1	4	BCL6	6	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	David G (1998), Deltour S (1999), Fujita N (2004), Fujita N (2004), Dhordain P (1998), Miles RR (2005)	6
NXF1	0	SNW1	0	affinity chromatography technology	Castello A (2012)	1
TAL1	0	SIN3A	13	affinity chromatography technology, pull down, pull down	Huang S (2000), Huang S (2000), Huang S (2000)	3
SOX2	4	HDAC1	4	affinity chromatography technology	Engelen E (2011)	1
HDAC1	4	SMARCA5	4	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
CREB1	1	ZHX1	1	two hybrid	Bandyopadhyay S (2010)	1
SLC27A6	2	VIM	0	two hybrid	Stelzl U (2005)	1
GATAD2B	15	MTA2	1	affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Feng Q (2002), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	5
HYPK	2	TP53	0	affinity chromatography technology	Choudhury KR (2012)	1
HNRNPL	3	PIAS4	5	affinity chromatography technology	Fei T (2017)	1
XRCC4	0	CHD3	19	two hybrid	Stelzl U (2005)	1
UBC	7	OTUD6B	0	pull down	Kwasna D (2018)	1
MBD2	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2001), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
NXF1	0	UBC	7	affinity chromatography technology	Castello A (2012)	1
SNW1	0	KMT2A	58	affinity chromatography technology	Bres V (2009)	1
MCM2	3	FUBP1	1	affinity chromatography technology	Drissi R (2015)	1
TWIST1	0	BCL6	6	pull down	Kotlyar M (2015)	1
SIN3A	13	GPS2	0	affinity chromatography technology	Farhana L (2007)	1
SNW1	0	CTTN	1	affinity chromatography technology	Lleres D (2010)	1
IKZF1	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), Kim J (1999), Kim J (1999)	3
MAN2A2	11	VIM	0	two hybrid	Stelzl U (2005)	1
CTBP1	2	CHD3	19	two hybrid	Vinayagam A (2011)	1
GADD45A	1	ZHX1	1	two hybrid	Vinayagam A (2011)	1
TP53	0	KMT2A	58	pull down, affinity chromatography technology	Dou Y (2005), Fogeron ML (2013)	2
LUC7L2	0	SRRT	5	affinity chromatography technology	Huttlin EL (2015)	1
HNRNPL	3	CTBP1	2	affinity chromatography technology	Fei T (2017)	1
RPL10	3	SERBP1	2	affinity chromatography technology	Hein MY (2015)	1
TWIST1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, imaging technique	Fu J (2011), Fu J (2011), Fu J (2012)	3
TWIST1	0	HDAC3	5	affinity chromatography technology	Wu MZ (2011)	1
TP53	0	MOV10	6	affinity chromatography technology	Li X (2015)	1
SOX2	4	HSD17B10	1	affinity chromatography technology	Cox JL (2013)	1
KMT2A	58	CTBP1	2	pull down, affinity chromatography technology	Xia ZB (2003), Xia ZB (2003)	2
CSNK2A1	15	ZHX1	1	two hybrid	Stelzl U (2005)	1
KIF15	4	CHD3	19	two hybrid	Stelzl U (2005)	1
RNF2	1	VIM	0	affinity chromatography technology	Cao Q (2014)	1
IKZF1	2	MTA2	1	affinity chromatography technology	Huttlin EL (2017)	1
FABP4	3	VIM	0	two hybrid, two hybrid	Stelzl U (2005), Vinayagam A (2011)	2
KDM1A	2	TRIM28	1	affinity chromatography technology	Cui S (2011)	1
BHLHE40	5	HDAC1	4	pull down	Sun H (2000)	1
KDM1A	2	MTA3	3	affinity chromatography technology, pull down, affinity chromatography technology	Wang Y (2009), Wang Y (2009), Li Q (2011)	3
MTA3	3	MTA1	3	biochemical	Wan C (2015)	1
ZNF827	2	CHD4	22	affinity chromatography technology, affinity chromatography technology	Conomos D (2014), Conomos D (2014)	2
SIN3A	13	TP53	0	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Murphy M (1999), Murphy M (1999), Murphy M (1999), Zilfou JT (2001)	4
HDAC1	4	ZNF827	2	affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Conomos D (2014)	2
NEFL	1	VIM	0	two hybrid, affinity chromatography technology, affinity chromatography technology	Goehler H (2004), Huttlin EL (2017), Boldt K (2016)	3
NR1H2	2	SIRT1	3	affinity chromatography technology	Li X (2007)	1
CHD3	19	KPNB1	3	two hybrid	Goehler H (2004)	1
GSK3B	1	TP53	0	affinity chromatography technology, two hybrid	Watcharasit P (2002), Vinayagam A (2011)	2
SIRT6	2	GATAD2B	15	affinity chromatography technology	Simeoni F (2013)	1
MCM2	3	HIST1H2BB	3	affinity chromatography technology	Drissi R (2015)	1
BMI1	0	HIST1H3A	3	affinity chromatography technology	Abdouh M (2016)	1
PHF20L1	4	MTA1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CSNK2A1	15	TP53	0	enzymatic study, affinity chromatography technology, affinity chromatography technology, imaging technique, pull down, enzymatic study	Uhle S (2003), Fogeron ML (2013), Bhansali M (2014), Chen TC (2014), Walerych D (2004), Walerych D (2004)	6
BMI1	0	HDAC2	1	affinity chromatography technology, genetic interference	Abdouh M (2016), Wong AS (2016)	2
VIM	0	PIAS4	5	two hybrid	Goehler H (2004)	1
MBD3L1	0	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
MTA1	3	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, pull down, x-ray crystallography, unspecified method, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, x-ray crystallography, affinity chromatography technology	Yao YL (2003), Roche AE (2008), Cui S (2011), Cui S (2011), Rolland T (2014), Huttlin EL (2015), Alqarni SS (2014), Alqarni SS (2014), Alqarni SS (2014), Wan C (2015), Huttlin EL (2017), Millard CJ (2016), Millard CJ (2016), Millard CJ (2016), Hauri S (2016)	15
HNRNPL	3	HTT	14	affinity chromatography technology	Fei T (2017)	1
LGR4	3	CHD4	22	affinity chromatography technology	Carmon KS (2014)	1
OTUD6B	0	CHD3	19	biochemical	Wan C (2015)	1
MOV10	6	THOC7	0	affinity chromatography technology	Castello A (2012)	1
PAICS	0	CHD3	19	two hybrid	Stelzl U (2005)	1
RBBP4	3	GATAD2A	3	pull down, biochemical, affinity chromatography technology, affinity chromatography technology	Gong Z (2006), Havugimana PC (2012), Huttlin EL (2017), Hauri S (2016)	4
RPL10	3	RPL29	0	affinity chromatography technology	Hein MY (2015)	1
CHD3	19	TCERG1	3	two hybrid	Goehler H (2004)	1
CSNK2A1	15	XRCC4	0	enzymatic study	Koch CA (2004)	1
NAB2	2	CHD3	19	affinity chromatography technology	Srinivasan R (2006)	1
TNNT1	0	CHD3	19	two hybrid	Vinayagam A (2011)	1
CDK2AP1	1	CHD3	19	affinity chromatography technology	Hein MY (2015)	1
PLK4	1	SDCCAG3	3	bioid	Firat-Karalar EN (2014)	1
SIRT6	2	RAD21	3	affinity chromatography technology	Simeoni F (2013)	1
CD2BP2	0	DDX5	2	affinity chromatography technology	Cloutier P (2017)	1
GATAD2B	15	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Huttlin EL (2017)	5
HSPH1	0	CHD3	19	two hybrid	Stelzl U (2005)	1
TAL1	0	ZHX1	1	two hybrid	Goehler H (2004)	1
SIRT1	3	TP73	2	affinity chromatography technology, affinity chromatography technology, enzymatic study	Dai JM (2007), Dai JM (2007), Dai JM (2007)	3
MCM2	3	HSPH1	0	affinity chromatography technology	Drissi R (2015)	1
EPOP	0	RBBP4	3	affinity chromatography technology	Hauri S (2016)	1
UBE2I	0	NXF1	0	affinity chromatography technology	Hein MY (2015)	1
MCM2	3	UBC	7	affinity chromatography technology	Drissi R (2015)	1
HDAC3	5	CTBP1	2	pull down	Zhang CL (2001)	1
TRIM25	5	RPL10	3	affinity chromatography technology	Choudhury NR (2017)	1
HSD17B10	1	SUMO2	0	affinity chromatography technology	Malty RH (2017)	1
TWIST1	0	CHD4	22	pull down	Fu J (2011)	1
CSNK2A1	15	HNRNPL	3	enzymatic study	Zhang M (2011)	1
THOC7	0	CHD3	19	two hybrid	Stelzl U (2005)	1
HSF1	1	CHD3	19	affinity chromatography technology	Khaleque MA (2008)	1
SMARCA2	17	RBBP4	3	biochemical, affinity chromatography technology	Sif S (2001), Nakamura T (2002)	2
RNF2	1	MOV10	6	affinity chromatography technology	Cao Q (2014)	1
ZNF219	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CD2BP2	0	PUF60	16	affinity chromatography technology	Ewing RM (2007)	1
GSK3B	1	VIM	0	two hybrid	Vinayagam A (2011)	1
HDAC1	4	DDX5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wilson BJ (2004), Wilson BJ (2004), Guo J (2010), Jacobs AM (2007), Mooney SM (2010), Mooney SM (2010)	6
CPE	2	LRIF1	3	two hybrid	Stelzl U (2005)	1
HDAC1	4	CTBP1	2	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Zhang CL (2001), Melhuish TA (2000), Sundqvist A (1998), Jin W (2008), Joshi P (2013)	5
RNF2	1	KMT2A	58	affinity chromatography technology	Dou Y (2005)	1
HSFY1	0	CHD3	19	affinity chromatography technology	Huttlin EL (2017)	1
TNNT1	0	DDX5	2	two hybrid	Vinayagam A (2011)	1
TP53	0	HABP4	1	pull down, affinity chromatography technology, affinity chromatography technology	Nery FC (2006), Nery FC (2006), Nery FC (2006)	3
SUMO2	0	ENO1	3	pull down	Ouyang J (2009)	1
TSC22D1	1	VIM	0	two hybrid	Vinayagam A (2011)	1
CHD3	19	TP53	0	two hybrid, two hybrid	Minty A (2000), Goehler H (2004)	2
MOV10	6	SMARCC2	9	affinity chromatography technology	Castello A (2012)	1
CSNK2A1	15	RBBP4	3	biochemical	Havugimana PC (2012)	1
TP53	0	KPNB1	3	affinity chromatography technology, pull down	Akakura S (2001), Akakura S (2001)	2
MBD3L1	0	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
PCMT1	1	AIMP2	0	two hybrid	Rolland T (2014)	1
KDM5B	27	CHD3	19	affinity chromatography technology	Li Q (2011)	1
ZNF219	3	MTA3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HNRNPL	3	TSC22D1	1	affinity chromatography technology	Fei T (2017)	1
MCM2	3	RPL10	3	affinity chromatography technology	Drissi R (2015)	1
GADD45A	1	PTN	0	two hybrid	Vinayagam A (2011)	1
JUN	0	SUMO1	0	protein complementation assay	Fang D (2004)	1
UHRF2	1	PUF60	16	affinity chromatography technology	Lai M (2016)	1
NR1H2	2	VIM	0	two hybrid	Vinayagam A (2011)	1
BARD1	4	PTN	0	two hybrid	Goehler H (2004)	1
SMARCA2	17	TAF6	4	affinity chromatography technology, affinity chromatography technology	Nakamura T (2002), Nakamura T (2002)	2
CSNK2A1	15	TP73	2	affinity chromatography technology, affinity chromatography technology, enzymatic study	Lu H (2014), Lu H (2014), Lu H (2014)	3
RNF2	1	HNRNPL	3	affinity chromatography technology	Cao Q (2014)	1
SGSM2	2	CHD3	19	two hybrid	Stelzl U (2005)	1
MOV10	6	UBC	7	affinity chromatography technology	Castello A (2012)	1
GATAD2B	15	CHD3	19	affinity chromatography technology, biochemical, affinity chromatography technology	Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	3
MTA1	3	UBE2I	0	affinity chromatography technology, pull down	Cong L (2011), Cong L (2011)	2
RNF2	1	UBC	7	enzymatic study	Woodsmith J (2012)	1
BARD1	4	TCERG1	3	pull down, two hybrid	Goehler H (2004), Goehler H (2004)	2
MBD3L1	0	CHD4	22	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SDCCAG3	3	VIM	0	two hybrid	Stelzl U (2005)	1
SAT1	0	CHD3	19	two hybrid	Stelzl U (2005)	1
RAD21	3	TNFRSF14	2	two hybrid	Panigrahi AK (2011)	1
RBBP7	1	SIN3A	13	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Kuzmichev A (2002), Nakamura T (2002), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	6
TP53	0	MTA2	1	pull down, affinity chromatography technology, pull down	Yao YL (2003), Luo J (2000), Luo J (2000)	3
SMARCA5	4	HIST1H3A	3	affinity chromatography technology, pull down, imaging technique	Loyola A (2001), Kouskouti A (2005), Soldi M (2013)	3
HDAC1	4	GATAD2A	3	pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gong Z (2006), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	6
KDM5B	27	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Shi L (2011), Li Q (2011), Li Q (2011), Li Q (2011), Li Q (2011), Barrett A (2007), Barrett A (2007)	7
IKZF1	2	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Kim J (1999), Kim J (1999)	2
ZNF219	3	MTA2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BMI1	0	MBD2	1	genetic interference	Wong AS (2016)	1
MCM2	3	HSD17B10	1	affinity chromatography technology, affinity chromatography technology	Drissi R (2015), Malty RH (2017)	2
BHLHE40	5	UBE2I	0	affinity chromatography technology, two hybrid	Ivanova AV (2001), Ivanova AV (2001)	2
MTA1	3	GATAD2B	15	biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	4
CREB1	1	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Canettieri G (2003), Canettieri G (2003), Canettieri G (2003), Kim HC (2010)	4
SHMT2	3	CHD3	19	affinity chromatography technology	Castello A (2012)	1
RPL10	3	CHD3	19	affinity chromatography technology	Hein MY (2015)	1
HDAC1	4	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Yao YL (2003), Grozinger CM (1999), Tong JK (1998), Tong JK (1998), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Terhune SS (2010), Polo SE (2010), Xue Y (1998), Xue Y (1998), Xue Y (1998), Kwintkiewicz J (2011), Cui S (2011), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Quan J (2014), Wan C (2015), Hein MY (2015), Weiss K (2016), Huttlin EL (2017)	28
MBD2	1	GATAD2B	15	pull down, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Brackertz M (2002), Feng Q (2002), Feng Q (2002), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	6
MTA1	3	SIRT1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SUMO1	0	ZHX1	1	two hybrid	Hecker CM (2006)	1
TAL1	0	KDM1A	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Hu X (2009), Hu X (2009), Hu X (2009), Hu X (2009)	4
TCERG1	3	PIAS4	5	two hybrid	Goehler H (2004)	1
CHD3	19	PCNT	10	two hybrid, affinity chromatography technology, affinity chromatography technology	Sillibourne JE (2007), Sillibourne JE (2007), Sillibourne JE (2007)	3
BCL6	6	CTBP1	2	pull down, affinity chromatography technology, imaging technique	Mendez LM (2008), Mendez LM (2008), Mendez LM (2008)	3
MOV10	6	UROD	2	affinity chromatography technology	Castello A (2012)	1
AIMP2	0	FUBP1	1	two hybrid, pull down, affinity chromatography technology, two hybrid	Wang J (2011), Kim MJ (2003), Kim MJ (2003), Kim MJ (2003)	4
HTT	14	PRPF40A	5	two hybrid, pull down, two hybrid	Faber PW (1998), Faber PW (1998), Goehler H (2004)	3
SMARCA2	17	FUBP1	1	biochemical	Wan C (2015)	1
HIST1H3A	3	KMT2A	58	pull down, pull down, x-ray crystallography, enzymatic study, unspecified method, enzymatic study, enzymatic study	Chang PY (2010), Chang PY (2010), Wang Z (2010), Shinsky SA (2014), Shinsky SA (2014), Nakamura T (2002), Patel A (2014)	7
CHD3	19	LRIF1	3	two hybrid	Goehler H (2004)	1
PIAS4	5	UBE2I	0	two hybrid, pull down, pull down, pull down	Wang J (2011), Yamamoto H (2003), Yin Y (2012), Ryu H (2010)	4
RETREG2	2	CHD3	19	two hybrid	Stelzl U (2005)	1
MBD3	4	HDAC1	4	affinity chromatography technology, biochemical, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Sakai H (2002), Zhang Y (1999), Zhang Y (1999), Saito M (2002), Noh EJ (2009), Noh EJ (2009), Le Guezennec X (2006), Humphrey GW (2001), Sun JM (2007), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	16
SOX2	4	MTA2	1	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Engelen E (2011)	2
LGR4	3	CPSF1	6	affinity chromatography technology	Carmon KS (2014)	1
SOX2	4	HDAC3	5	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
BMI1	0	CHD3	19	affinity chromatography technology	Cao Q (2014)	1
SNW1	0	SMARCA5	4	affinity chromatography technology	Lleres D (2010)	1
CASP6	0	CHD3	19	two hybrid	Stelzl U (2005)	1
RNF2	1	TRIM28	1	affinity chromatography technology	Cao Q (2014)	1
MYB	3	KMT2A	58	affinity chromatography technology	Jin S (2010)	1
RPL10	3	PHF6	1	affinity chromatography technology	Hein MY (2015)	1
MCM2	3	KPNB1	3	affinity chromatography technology	Drissi R (2015)	1
CCDC8	1	TRIM28	1	affinity chromatography technology	Hanson D (2014)	1
MBD3	4	DDX5	2	affinity chromatography technology	Carter CL (2010)	1
CDK2AP1	1	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Hein MY (2015), Hauri S (2016)	3
MTA1	3	IKZF1	2	two hybrid, affinity chromatography technology	Rolland T (2014), Huttlin EL (2017)	2
NXF1	0	SMARCC2	9	affinity chromatography technology	Castello A (2012)	1
RNF2	1	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Calao M (2012), Wen W (2013), Wen W (2013)	3
KDM5B	27	MTA2	1	affinity chromatography technology	Li Q (2011)	1
MTA2	1	RBBP7	1	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Yao YL (2003), Zhang Y (1999), Feng Q (2001), Wang Y (2009), Fu J (2011), Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Brasen C (2017), Brasen C (2017), Hauri S (2016)	11
HNRNPL	3	RBBP4	3	affinity chromatography technology	Fei T (2017)	1
TRIM28	1	TP53	0	enzymatic study, affinity chromatography technology, affinity chromatography technology	Doyle JM (2010), Gilmore-Hebert M (2010), Okamoto K (2006)	3
FUBP1	1	SIN3A	13	biochemical	Wan C (2015)	1
UBE2I	0	DDX5	2	enzymatic study	Matafora V (2009)	1
TRIM25	5	CHD3	19	affinity chromatography technology	Choudhury NR (2017)	1
RNF2	1	SMARCA5	4	affinity chromatography technology	Cao Q (2014)	1
SRRT	5	CHD3	19	two hybrid	Stelzl U (2005)	1
UHRF2	1	GATAD2B	15	affinity chromatography technology	Lai M (2016)	1
LGR4	3	IMMT	0	affinity chromatography technology	Carmon KS (2014)	1
SIN3A	13	SMARCC2	9	affinity chromatography technology	Nakamura T (2002)	1
UBC	7	SUMO2	0	affinity chromatography technology	Sahin U (2014)	1
CSNK2A1	15	SAFB	3	enzymatic study	Zhang M (2011)	1
BARD1	4	ZHX1	1	two hybrid	Goehler H (2004)	1
TP53	0	TWIST1	0	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Shiota M (2008), Shiota M (2008), Piccinin S (2012), Piccinin S (2012), Kotlyar M (2015)	5
TRIM25	5	KDM5B	27	affinity chromatography technology	Choudhury NR (2017)	1
SMARCA2	17	RBBP7	1	affinity chromatography technology	Nakamura T (2002)	1
BARD1	4	GIT1	10	pull down, two hybrid	Goehler H (2004), Goehler H (2004)	2
TP53	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, imaging technique, affinity chromatography technology, affinity chromatography technology, imaging technique	Ito A (2002), Wang C (2005), Dohi Y (2008), Jin W (2008), Lei Q (2006), Wu Y (2001), Wu Y (2001), Luo J (2000), Juan LJ (2000), Juan LJ (2000), Juan LJ (2000), Murphy M (1999), Insinga A (2004), Sun JM (2007), Yu XY (2010), Sinha S (2010), Sinha S (2010), Li Y (2012), Di Agostino S (2006), Pavithra L (2009), Pavithra L (2009), Luo J (2000), Chen TC (2014), Park EK (2015), Park EK (2015), Park EK (2015)	26
MAFG	1	CHD3	19	two hybrid	Stelzl U (2005)	1
UBE2I	0	TCERG1	3	enzymatic study	Gocke CB (2005)	1
SIRT6	2	CHD4	22	affinity chromatography technology	Simeoni F (2013)	1
SOX2	4	SMARCA2	17	affinity chromatography technology	Cox JL (2013)	1
MTA3	3	MTA2	1	affinity chromatography technology, biochemical	Bantscheff M (2011), Wan C (2015)	2
JUN	0	UBE2I	0	two hybrid, enzymatic study	Goettlicher M (1996), Muller S (2000)	2
TTR	0	VIM	0	two hybrid, two hybrid	Stelzl U (2005), Vinayagam A (2011)	2
TP53	0	VIM	0	affinity chromatography technology	Horikawa I (2014)	1
TP53	0	ADH5	1	affinity chromatography technology	Lunardi A (2010)	1
PTN	0	CHD3	19	two hybrid, two hybrid	Stelzl U (2005), Goehler H (2004)	2
KDM1A	2	IMMT	0	two hybrid, pull down	Stelzl U (2005), Stelzl U (2005)	2
HSD17B10	1	CHD3	19	two hybrid	Vinayagam A (2011)	1
UBC	7	PCMT1	1	affinity chromatography technology	Matsumoto M (2005)	1
HDAC2	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Adenuga D (2010), Xue Y (1998), Havugimana PC (2012), Bantscheff M (2011), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Hauri S (2016)	9
ZNF827	2	RBBP4	3	affinity chromatography technology	Conomos D (2014)	1
CCDC8	1	NEFL	1	affinity chromatography technology	Hanson D (2014)	1
ZNF219	3	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TP53	0	RBBP4	3	affinity chromatography technology	Fogeron ML (2013)	1
RAD21	3	CTTN	1	affinity chromatography technology	Panigrahi AK (2011)	1
KMT2A	58	HDAC2	1	affinity chromatography technology	Nakamura T (2002)	1
TP53	0	CCDC8	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Dai C (2011), Dai C (2011), Dai C (2011), Dai C (2011), Fogeron ML (2013), Hanson D (2014), Hanson D (2014)	7
UHRF2	1	RAD51	3	far western blotting	Mori T (2011)	1
MBD3	4	MTA2	1	affinity chromatography technology, biochemical, pull down, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical	Sakai H (2002), Zhang Y (1999), Zhang Y (1999), Saito M (2002), Feng Q (2001), Wang Y (2009), Havugimana PC (2012), Wan C (2015)	8
SNW1	0	FUBP1	1	affinity chromatography technology	Lleres D (2010)	1
SIRT6	2	HDAC2	1	affinity chromatography technology	Simeoni F (2013)	1
MAN2A2	11	LUC7L2	0	two hybrid	Stelzl U (2005)	1
TRIM25	5	TRIM28	1	affinity chromatography technology	Choudhury NR (2017)	1
TRIM25	5	LUC7L2	0	affinity chromatography technology	Choudhury NR (2017)	1
TRIM25	5	SIN3A	13	affinity chromatography technology	Choudhury NR (2017)	1
CHD4	22	KDM1A	2	affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011)	2
GATAD2A	3	MTA1	3	biochemical, affinity chromatography technology	Wan C (2015), Huttlin EL (2017)	2
SMARCA5	4	HDAC2	1	biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, imaging technique, biochemical, biochemical	Hakimi MA (2002), Hakimi MA (2002), Zhou J (2005), Zhou J (2005), Zhou J (2005), Havugimana PC (2012), Wan C (2015)	7
SIRT6	2	RBBP7	1	affinity chromatography technology	Simeoni F (2013)	1
HDAC3	5	SAFB	3	affinity chromatography technology, affinity chromatography technology	Jiang S (2006), Garee JP (2011)	2
SIN3A	13	RBBP4	3	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hassig CA (1997), Zhang Y (1998), Nakamura T (2002), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Bantscheff M (2011), Hauri S (2016)	8
HNRNPL	3	PCNT	10	affinity chromatography technology	Fei T (2017)	1
SATB1	1	CASP6	0	affinity chromatography technology, affinity chromatography technology	Tan JA (2008), Tan JA (2008)	2
RAD51	3	VIM	0	two hybrid	Stelzl U (2005)	1
PIAS4	5	LRIF1	3	two hybrid	Goehler H (2004)	1
TRIM28	1	MTA2	1	biochemical	Kristensen AR (2012)	1
TP53	0	ZHX1	1	two hybrid	Goehler H (2004)	1
FUBP1	1	VIM	0	two hybrid	Stelzl U (2005)	1
TP53	0	HDAC2	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li P (2010), Insinga A (2004), Sun JM (2007), Tian B (2011), Adenuga D (2010), Brandl A (2012)	6
LGR4	3	SAFB	3	affinity chromatography technology	Carmon KS (2014)	1
BCL6	6	SIN3A	13	pull down, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology	Wong CW (1998), Dhordain P (1998), Dhordain P (1998), Dhordain P (1998), Miles RR (2005)	5
PRPF40A	5	UBE2I	0	two hybrid	Colland F (2004)	1
CSNK2A1	15	KMT2A	58	affinity chromatography technology	Hauri S (2016)	1
KMT2A	58	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology	Xia ZB (2003), Xia ZB (2003), Nakamura T (2002)	3
SHMT2	3	THOC7	0	affinity chromatography technology	Castello A (2012)	1
SATB1	1	PIAS4	5	two hybrid, two hybrid	Tan JA (2010), Tan JA (2008)	2
RNF2	1	MTA2	1	affinity chromatography technology	Cao Q (2014)	1
SKIL	3	PIAS4	5	two hybrid	Colland F (2004)	1
NEFL	1	KDM1A	2	two hybrid	Weimann M (2013)	1
UBC	7	CSNK2A1	15	affinity chromatography technology	Matsumoto M (2005)	1
MBD3L1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
SATB1	1	CHD3	19	affinity chromatography technology, biochemical	Yasui D (2002), Yasui D (2002)	2
MOV10	6	CSTF2	2	affinity chromatography technology	Castello A (2012)	1
BMI1	0	PHF6	1	affinity chromatography technology	Cao Q (2014)	1
CREB1	1	JUN	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Benbrook DM (1990), Li X (2015), Li X (2015)	3
CHD3	19	GIT1	10	pull down, two hybrid	Goehler H (2004), Goehler H (2004)	2
HABP4	1	UBE2I	0	two hybrid	Nery FC (2006)	1
CCDC8	1	IMMT	0	affinity chromatography technology	Hanson D (2014)	1
HDAC1	4	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tong JK (1998), Tong JK (1998), Kuzmichev A (2002), Sun JM (2007), Terhune SS (2010), Xue Y (1998), Xue Y (1998), Xue Y (1998), Havugimana PC (2012), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	12
SIRT1	3	HDAC2	1	affinity chromatography technology	Law IK (2009)	1
CDK2AP1	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	6
SIRT6	2	HDAC1	4	affinity chromatography technology	Simeoni F (2013)	1
RAD21	3	SNW1	0	biochemical, affinity chromatography technology	Havugimana PC (2012), Lleres D (2010)	2
MBD3L1	0	MBD3	4	two hybrid, two hybrid, pull down, affinity chromatography technology	Jiang CL (2004), Jiang CL (2004), Jiang CL (2004), Jiang CL (2004)	4
HDAC2	1	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Hakimi MA (2003), Tong JK (1998), Tong JK (1998), Hakimi MA (2002), Sun JM (2007), Xue Y (1998), Xue Y (1998), Xue Y (1998), Havugimana PC (2012), Joshi P (2013)	10
SMARCA5	4	RBBP4	3	biochemical, biochemical, biochemical	Hakimi MA (2002), Havugimana PC (2012), Wan C (2015)	3
BARD1	4	PUF60	16	affinity chromatography technology	Woods NT (2012)	1
CCDC8	1	TRIM25	5	affinity chromatography technology	Hanson D (2014)	1
CDK2AP1	1	MTA2	1	affinity chromatography technology	Hein MY (2015)	1
SMARCA5	4	SIN3A	13	affinity chromatography technology	Burgio G (2008)	1
SNRNP40	1	CHD3	19	biochemical	Wan C (2015)	1
MBD3L1	0	MTA3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SERBP1	2	VIM	0	two hybrid	Stelzl U (2005)	1
TAL1	0	CHD4	22	affinity chromatography technology	Hu X (2009)	1
HIC1	1	CTBP1	2	two hybrid, affinity chromatography technology	Van Rechem C (2009), Stankovic-Valentin N (2006)	2
MBD3L1	0	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FUBP1	1	SMARCC2	9	biochemical	Wan C (2015)	1
CSNK2A1	15	MCM2	3	enzymatic study	Zhang M (2011)	1
C4orf17	0	CHD3	19	two hybrid	Stelzl U (2005)	1
HYPK	2	HSF1	1	affinity chromatography technology	Choudhury KR (2012)	1
DDX5	2	SNW1	0	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
HDAC2	1	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical	Hakimi MA (2003), Schmidt DR (1999), Schmidt DR (1999), Tong JK (1998), Tong JK (1998), Tong JK (1998), ONeill DW (2000), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Xue Y (1998), Xue Y (1998), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	17
RBBP7	1	CCDC8	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC3	5	JUN	0	affinity chromatography technology	Weiss C (2003)	1
CCDC8	1	SMARCA5	4	affinity chromatography technology	Hanson D (2014)	1
PHF6	1	HIST1H2BB	3	affinity chromatography technology	Todd MA (2012)	1
TP53	0	BCL6	6	pull down	Kotlyar M (2015)	1
MBD3L1	0	ZNF219	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PHF6	1	CHD4	22	affinity chromatography technology, affinity chromatography technology	Todd MA (2012), Todd MA (2012)	2
UBE2I	0	IKZF1	2	two hybrid, two hybrid	Rual JF (2005), Rolland T (2014)	2
UBC	7	RBBP4	3	affinity chromatography technology	Matsumoto M (2005)	1
TAF6	4	HDAC2	1	affinity chromatography technology	Nakamura T (2002)	1
LUC7L2	0	IK	6	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NXF1	0	CPSF1	6	affinity chromatography technology	Castello A (2012)	1
KIF15	4	VIM	0	two hybrid	Stelzl U (2005)	1
RPL10	3	DDX5	2	affinity chromatography technology	Hein MY (2015)	1
PRPF40A	5	TCERG1	3	biochemical	Havugimana PC (2012)	1
KDM1A	2	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li Q (2011), Cui S (2011), Cui S (2011)	3
UBE2I	0	TRIM28	1	affinity chromatography technology, pull down, enzymatic study, pull down	Liang Q (2011), Garvin AJ (2013), Ivanov AV (2007), Neo SH (2015)	4
CASP8	1	UBC	7	pull down	Bellail AC (2012)	1
SMARCA2	17	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology	Sif S (2001), Pal S (2003), Nakamura T (2002)	3
SRRT	5	GIT1	10	two hybrid	Stelzl U (2005)	1
SIRT1	3	CTTN	1	affinity chromatography technology, pull down, enzymatic study	Zhang Y (2009), Zhang Y (2009), Zhang Y (2009)	3
IKZF1	2	GATAD2A	3	affinity chromatography technology	Huttlin EL (2017)	1
UBC	7	ZHX1	1	pull down	Nathan JA (2013)	1
SHMT2	3	CTTN	1	biochemical	Kristensen AR (2012)	1
UBE2I	0	HSF1	1	enzymatic study	Mohideen F (2009)	1
LUC7L2	0	SNW1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Lleres D (2010), Huttlin EL (2017)	3
CHD3	19	PIAS4	5	two hybrid	Goehler H (2004)	1
OTUD6B	0	METAP2	3	affinity chromatography technology	Huttlin EL (2015)	1
IKZF1	2	GATAD2B	15	affinity chromatography technology	Huttlin EL (2017)	1
ZNF827	2	CHD3	19	affinity chromatography technology	Conomos D (2014)	1
MTA2	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Zhang Y (1999), Banach-Orlowska M (2009), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Wang Y (2009), Fu J (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	14
MBD3L1	0	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
HSFY1	0	RAD51	3	affinity chromatography technology	Huttlin EL (2017)	1
TRIM25	5	HIC1	1	affinity chromatography technology	Choudhury NR (2017)	1
MYB	3	UBE2I	0	two hybrid, enzymatic study	Bies J (2002), Kanei-Ishii C (2012)	2
BMI1	0	SRRT	5	affinity chromatography technology	Cao Q (2014)	1
ATPIF1	0	CHD3	19	two hybrid	Stelzl U (2005)	1
MTA1	3	JUN	0	pull down	Li DQ (2011)	1
TAL1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Goardon N (2006), Hu X (2009), Hu X (2009)	3
MBD3L1	0	GATAD2B	15	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD3	19	CSNK2A1	15	affinity chromatography technology	Sun JM (2007)	1
BMI1	0	SMARCA5	4	affinity chromatography technology	Cao Q (2014)	1
BCL6	6	MTA3	3	affinity chromatography technology, affinity chromatography technology, pull down, pull down, imaging technique	Fujita N (2004), Fujita N (2004), Fujita N (2004), Fujita N (2004), Parekh S (2007)	5
ENO1	3	IVNS1ABP	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Perconti G (2007), Perconti G (2007), Tsai PL (2013)	3
SDCCAG3	3	GIT1	10	two hybrid	Stelzl U (2005)	1
PIAS4	5	HDAC1	4	pull down	Gross M (2004)	1
MTA2	1	RBBP4	3	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, biochemical, x-ray crystallography, affinity chromatography technology	Yao YL (2003), Zhang Y (1999), Banach-Orlowska M (2009), Pflum MK (2001), Feng Q (2001), Wang Y (2009), Cui S (2011), Havugimana PC (2012), Wan C (2015), Brasen C (2017), Brasen C (2017), Brasen C (2017), Hauri S (2016)	13
BARD1	4	PIAS4	5	two hybrid	Goehler H (2004)	1
SMARCA2	17	SMARCC2	9	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology	Wang W (1996), Hu K (2006), Hu K (2006), Pal S (2003), Nakamura T (2002), Tando T (2010), Mak AB (2010), Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	10
CCDC8	1	DDX5	2	affinity chromatography technology	Hanson D (2014)	1
BCL6	6	MBD3	4	affinity chromatography technology, affinity chromatography technology	Fujita N (2004), Fujita N (2004)	2
HDAC1	4	RBBP7	1	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Ng HH (1999), Zhang Y (1999), Zhang Y (1997), Banach-Orlowska M (2009), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Wan C (2015), Hein MY (2015), Yeh HH (2015), Yeh HH (2015), Huttlin EL (2017), Hauri S (2016)	19
CHD3	19	HDAC3	5	biochemical	Havugimana PC (2012)	1
SOX2	4	SMARCA5	4	affinity chromatography technology	Engelen E (2011)	1
PRG2	2	CHD3	19	two hybrid	Stelzl U (2005)	1
RNF2	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Cao Q (2014)	2
RGS2	2	GIT1	10	two hybrid, two hybrid	Stelzl U (2005), Vinayagam A (2011)	2
BHLHE40	5	SIN3A	13	pull down	Sun H (2000)	1
SOX2	4	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
RBBP4	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (2003), Yao YL (2003), Nicolas E (2001), Nicolas E (2001), Grozinger CM (1999), You A (2001), Hassig CA (1997), Hassig CA (1997), Ng HH (1999), Zhang Y (1999), Zhang Y (2002), Hassig CA (1998), Zhang Y (1997), Banach-Orlowska M (2009), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Sun JM (2007), Sun JM (2007), Karwowska-Desaulniers P (2007), Terhune SS (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	35
HDAC1	4	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Yao YL (2003), You A (2001), Zhang Y (1999), Zhang Y (1999), Yasui D (2002), Banach-Orlowska M (2009), Banach-Orlowska M (2009), Cui Y (2006), Pflum MK (2001), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Humphrey GW (2001), Zhang Y (1998), Terhune SS (2010), Opsahl JA (2010), Wang Y (2009), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Kristensen AR (2012), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	27
MBD2	1	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ng HH (1999), Feng Q (2001), Hauri S (2016)	3
MAFG	1	VIM	0	two hybrid	Stelzl U (2005)	1
SIRT1	3	CHD3	19	affinity chromatography technology	Kim JE (2008)	1
KMT2A	58	CHD3	19	affinity chromatography technology	Nakamura T (2002)	1
MOV10	6	EPOP	0	affinity chromatography technology	Castello A (2012)	1
UBE2I	0	TP53	0	two hybrid, two hybrid, two hybrid, enzymatic study, two hybrid, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study	Minty A (2000), Gallagher WM (1999), Shen Z (1996), Bernier-Villamor V (2002), Wang J (2008), Spektor TM (2011), Jakobs A (2007), Mohideen F (2009), Lin JY (2004), Bennett RL (2012), Heo KS (2013), Morimoto M (2003), Rodriguez MS (1999), Muller S (2000), Fernandez-Lloris R (2006), Mohan RD (2007), Brandt M (2013), Weger S (2005)	18
NXF1	0	UROD	2	affinity chromatography technology	Castello A (2012)	1
TSC22D1	1	CHD3	19	two hybrid	Vinayagam A (2011)	1
SOX2	4	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Engelen E (2011), Cox JL (2013)	2
UBA3	0	KDM1A	2	two hybrid	Weimann M (2013)	1
SUMO2	0	MTA2	1	pull down	Ouyang J (2009)	1
TCERG1	3	HTT	14	pull down, two hybrid	Holbert S (2001), Goehler H (2004)	2
HNRNPL	3	MTA3	3	affinity chromatography technology	Fei T (2017)	1
SMARCA5	4	CREB1	1	affinity chromatography technology	Yang Y (2006)	1
KMT2A	58	SIN3A	13	affinity chromatography technology, affinity chromatography technology	Yokoyama A (2010), Nakamura T (2002)	2
MCM2	3	HNRNPL	3	affinity chromatography technology	Drissi R (2015)	1
TP53	0	RBBP7	1	affinity chromatography technology	Fogeron ML (2013)	1
CDK2AP1	1	MBD3	4	affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Hein MY (2015)	2
HDAC1	4	IKZF1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (1999), Koipally J (2002), Kim J (1999), Kim J (1999), Joshi P (2013)	5
MCM2	3	DDX5	2	affinity chromatography technology	Drissi R (2015)	1
CHD3	19	MBD3	4	biochemical	Havugimana PC (2012)	1
TRIM25	5	UBC	7	enzymatic study	Sanchez JG (2016)	1
ZNF219	3	MTA1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TP53	0	SNW1	0	affinity chromatography technology	Fogeron ML (2013)	1
TTR	0	CHD3	19	two hybrid, two hybrid	Stelzl U (2005), Vinayagam A (2011)	2
MAN2A2	11	GIT1	10	two hybrid	Stelzl U (2005)	1
MOV10	6	SNRNP40	1	affinity chromatography technology	Castello A (2012)	1
SGSM2	2	PTN	0	two hybrid	Stelzl U (2005)	1
SIRT6	2	HDAC3	5	affinity chromatography technology	Huttlin EL (2017)	1
CASP8	1	TP53	0	affinity chromatography technology, affinity chromatography technology	Yao Z (2007), Yao Z (2007)	2
DDX5	2	LUC7L2	0	biochemical	Wan C (2015)	1
TRIM25	5	RETREG2	2	affinity chromatography technology	Choudhury NR (2017)	1
SAT1	0	TP53	0	two hybrid	Stelzl U (2005)	1
MTA2	1	GATAD2A	3	biochemical, biochemical, affinity chromatography technology	Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	3
SRRT	5	IMMT	0	two hybrid	Stelzl U (2005)	1
TRIM25	5	ENO1	3	affinity chromatography technology, affinity chromatography technology	Choudhury NR (2017), Choudhury NR (2017)	2
CSNK2A1	15	PRPF40A	5	enzymatic study, affinity chromatography technology, affinity chromatography technology	Zhang M (2011), Huttlin EL (2015), Huttlin EL (2017)	3
SMARCC2	9	HDAC2	1	affinity chromatography technology	Battaglioli E (2002)	1
SAT1	0	LRIF1	3	two hybrid	Stelzl U (2005)	1
SERBP1	2	TP53	0	affinity chromatography technology	Nery FC (2006)	1
EPOP	0	CHD3	19	affinity chromatography technology	Hauri S (2016)	1
MCM2	3	PAICS	0	affinity chromatography technology	Drissi R (2015)	1
TAL1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Goardon N (2006), Hu X (2009), Hu X (2009)	3
MTA3	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Fujita N (2003), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	5
CHD3	19	CPSF1	6	biochemical	Wan C (2015)	1
CRCT1	1	CHD3	19	two hybrid	Stelzl U (2005)	1
SRRT	5	TRIM28	1	biochemical	Wan C (2015)	1
PUF60	16	AIMP2	0	biochemical	Wan C (2015)	1
SMARCA5	4	SMARCC2	9	biochemical	Havugimana PC (2012)	1
RAD51	3	TP53	0	affinity chromatography technology, biochemical, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Dong Y (2003), Dong Y (2003), Dong Y (2003), Stuerzbecher HW (1996), Stuerzbecher HW (1996), Buchhop S (1997), Nakai-Murakami C (2007), Yang Q (2004), Rasti M (2015), Rasti M (2015)	10
FOXA1	2	CREB1	1	affinity chromatography technology	Li X (2015)	1
UBE2I	0	HIC1	1	enzymatic study, affinity chromatography technology	Stankovic-Valentin N (2007), Dehennaut V (2013)	2
RNF2	1	RPL10	3	affinity chromatography technology	Cao Q (2014)	1
MBD3	4	GATAD2A	3	pull down, pull down, biochemical, biochemical, affinity chromatography technology	Brackertz M (2002), Gong Z (2006), Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	5
SAT1	0	MTA1	3	two hybrid	Rolland T (2014)	1
MBD3L1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
MBD2	1	MTA1	3	biochemical	Wan C (2015)	1
GATAD2B	15	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Gong Z (2006), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	7
SIRT6	2	CHD3	19	two hybrid, two hybrid	Stelzl U (2005), Vinayagam A (2011)	2
HDAC2	1	HSF1	1	affinity chromatography technology, affinity chromatography technology	Fritah S (2009), Khaleque MA (2008)	2
NR4A1	4	TRIM28	1	affinity chromatography technology, affinity chromatography technology, pull down	Rambaud J (2009), Rambaud J (2009), Rambaud J (2009)	3
SUMO1	0	PIAS4	5	two hybrid	Hecker CM (2006)	1
UBE2I	0	CHD3	19	two hybrid	Lee BH (2003)	1
TP53	0	AIMP2	0	affinity chromatography technology, pull down, two hybrid, pull down	Han JM (2008), Han JM (2008), Han JM (2008), Han JM (2008)	4
CREB1	1	HTT	14	affinity chromatography technology	Lee J (2005)	1
MTA2	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Pflum MK (2001)	2
HSD17B10	1	RBBP7	1	affinity chromatography technology	Malty RH (2017)	1
HNRNPL	3	SMARCA2	17	affinity chromatography technology	Fei T (2017)	1
HSD17B10	1	HDAC1	4	affinity chromatography technology	Malty RH (2017)	1
TXNDC9	0	GIT1	10	two hybrid	Stelzl U (2005)	1
CCDC8	1	MCM2	3	affinity chromatography technology	Hanson D (2014)	1
RNF2	1	SMARCC2	9	affinity chromatography technology	Cao Q (2014)	1
VIM	0	LRIF1	3	two hybrid	Stelzl U (2005)	1
NEFL	1	PIAS4	5	two hybrid	Goehler H (2004)	1
RNF2	1	IK	6	affinity chromatography technology	Cao Q (2014)	1
HIST1H3A	3	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method	Wysocka J (2006), Nishioka K (2002), Tagami H (2004), Foltz DR (2009), Millard CJ (2016)	5
CHD3	19	MYB	3	affinity chromatography technology, pull down	Saether T (2007), Saether T (2007)	2
RAD21	3	CHD3	19	biochemical	Hakimi MA (2002)	1
RNF2	1	CHD4	22	affinity chromatography technology	Cao Q (2014)	1
SKIL	3	UBE2I	0	two hybrid	Colland F (2004)	1
TP73	2	ADH5	1	affinity chromatography technology	Lunardi A (2010)	1
HIST1H3A	3	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology	Nishioka K (2002), Li X (2014), Hein MY (2015)	3
C4orf17	0	KDM1A	2	two hybrid	Weimann M (2013)	1
CREB1	1	VIM	0	two hybrid	Stelzl U (2005)	1
PTPRS	15	PTN	0	two hybrid	Stelzl U (2005)	1
RNF2	1	DDX5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cao Q (2014), Li H (2017), Li H (2017)	3
HIST1H3A	3	LRIF1	3	bioid	Lambert JP (2015)	1
CSTF2	2	CHD3	19	two hybrid	Stelzl U (2005)	1
UBE2I	0	KDM1A	2	enzymatic study	Gocke CB (2005)	1
CDK2AP1	1	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017)	2
ENO1	3	HDAC1	4	pull down, affinity chromatography technology	Ghosh AK (1999), Ghosh AK (1999)	2
SKIL	3	HDAC1	4	affinity chromatography technology	Nomura T (1999)	1
MOV10	6	CD2BP2	0	affinity chromatography technology	Castello A (2012)	1
HIST1H3A	3	BRD1	5	bioid, affinity chromatography technology	Lambert JP (2015), Fryland T (2016)	2
ZNF219	3	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
IKZF1	2	SNW1	0	two hybrid	Rolland T (2014)	1
DDX5	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Mooney SM (2010), Mooney SM (2010)	2
HIC1	1	CHD3	19	affinity chromatography technology	Van Rechem C (2010)	1
HDAC1	4	VIM	0	affinity chromatography technology	Terhune SS (2010)	1
SUMO2	0	RBBP4	3	pull down	Ouyang J (2009)	1
DDX5	2	XRCC4	0	biochemical	Havugimana PC (2012)	1
SERF2	0	CHD3	19	two hybrid	Stelzl U (2005)	1
MBD3	4	RBBP4	3	pull down, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (1999), Cui S (2011), Havugimana PC (2012), Hauri S (2016)	4
UBE2I	0	SUMO1	0	affinity chromatography technology, pull down, two hybrid, two hybrid, fluorescent resonance energy transfe, pull down, two hybrid, two hybrid, pull down, pull down, two hybrid, pull down, fluorescent resonance energy transfe, pull down, two hybrid, pull down, pull down, enzymatic study, enzymatic study, biochemical, affinity chromatography technology	Ewing RM (2007), Tatham MH (2003), Minty A (2000), Shen Z (1996), Song Y (2011), Knipscheer P (2007), Boutell C (2011), Gong L (1997), Gong L (1997), Hemelaar J (2004), Hecker CM (2006), Hecker CM (2006), Martin SF (2008), Everett RD (2014), Rolland T (2014), Zilio N (2013), Carbia-Nagashima A (2007), Knipscheer P (2007), Matic I (2008), Wan C (2015), Hein MY (2015)	21
TRIM28	1	HIST1H3A	3	imaging technique	Li X (2010)	1
SOX2	4	TWIST1	0	affinity chromatography technology	Engelen E (2011)	1
HSD17B10	1	PSMD14	3	affinity chromatography technology	Malty RH (2017)	1
AIMP2	0	PSME1	1	two hybrid	Vinayagam A (2011)	1
TRIM25	5	RBBP4	3	affinity chromatography technology	Choudhury NR (2017)	1
MTA3	3	MBD2	1	affinity chromatography technology, biochemical	Bantscheff M (2011), Wan C (2015)	2
TRIM28	1	HYPK	2	biochemical	Wan C (2015)	1
ADH5	1	CHD3	19	two hybrid	Stelzl U (2005)	1
HDAC2	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Fleischer TC (2003), Fleischer TC (2003), Hakimi MA (2003), Yang L (2003), Laherty CD (1997), Zhang Y (2002), Tong JK (1998), Zhang Y (2005), Nakamura T (2002), Sekhavat A (2007), Zou J (2004), Sun JM (2007), Xue Y (1998), Tsai SC (2002), Brandl A (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hsu DS (2014)	20
ENO1	3	THOC7	0	affinity chromatography technology	Castello A (2012)	1
NR4A1	4	MTA2	1	affinity chromatography technology, affinity chromatography technology	Rambaud J (2009), Rambaud J (2009)	2
UBE2I	0	CHD4	22	enzymatic study	Gocke CB (2005)	1
TAF6	4	RBBP4	3	affinity chromatography technology	Nakamura T (2002)	1
SAFB	3	TP53	0	affinity chromatography technology, affinity chromatography technology	Peidis P (2011), Peidis P (2011)	2
TRIM25	5	HIST1H2BB	3	affinity chromatography technology	Choudhury NR (2017)	1
SKIL	3	SIN3A	13	affinity chromatography technology	Nomura T (1999)	1
JUN	0	UBC	7	two hybrid, protein complementation assay	Bandyopadhyay S (2010), Fang D (2004)	2
BMI1	0	IMMT	0	two hybrid, affinity chromatography technology	Stelzl U (2005), Cao Q (2014)	2
UBC	7	CHD4	22	affinity chromatography technology	Matsumoto M (2005)	1
UBE2I	0	KPNB1	3	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Hein MY (2015)	2
SIRT1	3	UBE2I	0	enzymatic study	Hsieh YL (2013)	1
RBBP7	1	SMARCA5	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
UBC	7	KPNB1	3	affinity chromatography technology	Matsumoto M (2005)	1
BHLHE40	5	ZHX1	1	two hybrid	Stelzl U (2005)	1
ZNF219	3	CHD4	22	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TAL1	0	RBBP7	1	affinity chromatography technology	Hu X (2009)	1
MBD3L1	0	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CCDC8	1	SMARCC2	9	affinity chromatography technology	Hanson D (2014)	1
TP73	2	KDM1A	2	affinity chromatography technology	Tsai WW (2008)	1
SUMO2	0	CHD4	22	pull down	Ouyang J (2009)	1
HIST1H3A	3	HDAC3	5	pull down	Li X (2014)	1
HNRNPL	3	SGSM2	2	affinity chromatography technology	Fei T (2017)	1
KMT2A	58	RBBP7	1	affinity chromatography technology	Nakamura T (2002)	1