PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000496638	[[45466428, 45467123], [45474065, 45474238]]	None
ENST00000298295	[[45471576, 45473503], [45474065, 45474258]]	[[45472839, 45473478]]
ENST00000448778	[[45473226, 45473667], [45474065, 45474237]]	[[45473226, 45473478]]

Promoter

Chrom	Start	End	Description
chr10	45472995	45473006	CAGE_peak_3_at_C10orf10_5end
chr10	45473374	45473404	CAGE_peak_2_at_C10orf10_5end
chr10	45474250	45474264	CAGE_peak_1_at_C10orf10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I045726	45726571	45728201	2.09	[{'connected_gene': 'WASHC2C', 'score': 587.26}, {'connected_gene': 'ENSG00000228702', 'score': 550.77}, {'connected_gene': 'FAM21FP', 'score': 550.77}, {'connected_gene': 'PARGP1', 'score': 57.63}, {'connected_gene': 'AGAP4', 'score': 26.84}, {'connected_gene': 'LOC105378289', 'score': 19.78}, {'connected_gene': 'ZFAND4', 'score': 19.33}, {'connected_gene': 'ENSG00000273363', 'score': 11.86}, {'connected_gene': 'AGAP10P', 'score': 10.48}, {'connected_gene': 'DEPP1', 'score': 9.69}, {'connected_gene': 'ALOX5', 'score': 4.75}, {'connected_gene': 'PIR32972', 'score': 0.31}]
chr10	GH10I044989	44989117	44998800	1.64	[{'connected_gene': 'C10orf25', 'score': 17.68}, {'connected_gene': 'ENSG00000223462', 'score': 12.45}, {'connected_gene': 'DEPP1', 'score': 7.81}, {'connected_gene': 'PIR39907', 'score': 0.77}, {'connected_gene': 'GC10M045017', 'score': 0.77}, {'connected_gene': 'PIR53874', 'score': 0.77}, {'connected_gene': 'RASSF4', 'score': 0.29}]
chr10	GH10I044971	44971395	44988290	2.8	[{'connected_gene': 'DEPP1', 'score': 550.77}, {'connected_gene': 'PIR49011', 'score': 550.77}, {'connected_gene': 'C10orf25', 'score': 25.84}, {'connected_gene': 'ZNF22', 'score': 21.09}, {'connected_gene': 'TMEM72-AS1', 'score': 18.58}, {'connected_gene': 'RASSF4', 'score': 17.48}, {'connected_gene': 'FAM21FP', 'score': 13.13}, {'connected_gene': 'ENSG00000223462', 'score': 12.49}, {'connected_gene': 'ENSG00000234504', 'score': 11.31}, {'connected_gene': 'WASHC2C', 'score': 10.81}, {'connected_gene': 'TMEM72', 'score': 10.31}, {'connected_gene': 'CEP164P1', 'score': 7.18}, {'connected_gene': 'PIR39907', 'score': 0.37}]
chr10	GH10I045235	45235893	45236259	0.59	[{'connected_gene': 'ENSG00000227683', 'score': 23.3}, {'connected_gene': 'DEPP1', 'score': 1.69}, {'connected_gene': 'CUBNP2', 'score': 0.39}, {'connected_gene': 'ENSG00000278531', 'score': 0.28}]