PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000448904	[[53277398, 53277942], [53282670, 53282837], [53286850, 53287004], [53298131, 53298245], [53307353, 53307494], [53313165, 53313306], [53313764, 53313947]]	[[53277729, 53277942], [53282670, 53282837], [53286850, 53287004], [53298131, 53298245], [53307353, 53307494], [53313165, 53313306], [53313764, 53313836]]
ENST00000377962	[[53277403, 53277945], [53282670, 53282837], [53286850, 53287004], [53298131, 53298245], [53307353, 53307494], [53313165, 53313306], [53313764, 53313915]]	[[53277729, 53277945], [53282670, 53282837], [53286850, 53287004], [53298131, 53298245], [53307353, 53307494], [53313165, 53313306], [53313764, 53313836]]
ENST00000431550	[[53286850, 53287004], [53298131, 53298245], [53307353, 53307494], [53313165, 53313487]]	[[53286850, 53287004], [53298131, 53298245], [53307353, 53307473]]
NM_007015	[[53277398, 53277945], [53282670, 53282837], [53286850, 53287004], [53298131, 53298245], [53307353, 53307494], [53313165, 53313306], [53313764, 53313947]]	[[53277729, 53277945], [53282670, 53282837], [53286850, 53287004], [53298131, 53298245], [53307353, 53307494], [53313165, 53313306], [53313764, 53313836]]
NM_001011705	[[53277398, 53277942], [53282670, 53282837], [53286850, 53287004], [53298131, 53298245], [53307353, 53307494], [53313165, 53313306], [53313764, 53313947]]	[[53277729, 53277942], [53282670, 53282837], [53286850, 53287004], [53298131, 53298245], [53307353, 53307494], [53313165, 53313306], [53313764, 53313836]]

Promoter

Chrom	Start	End	Description
chr13	53313496	53313507	CAGE_peak_3_at_LECT1_5end
chr13	53313884	53313897	CAGE_peak_2_at_LECT1_5end
chr13	53313905	53313964	CAGE_peak_1_at_LECT1_5end
chr13	53314077	53314084	CAGE_peak_5_at_LECT1_5end
chr13	53314109	53314157	CAGE_peak_4_at_LECT1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I052737	52737991	52740323	1.49	[{'connected_gene': 'CNMD', 'score': 550.77}, {'connected_gene': 'CKAP2', 'score': 18.37}, {'connected_gene': 'TPTE2P2', 'score': 10.39}, {'connected_gene': 'ATP7B', 'score': 5.99}, {'connected_gene': 'PPIAP26', 'score': 4.89}, {'connected_gene': 'GC13M052678', 'score': 0.22}]
chr13	GH13I052728	52728706	52728855	0.71	[{'connected_gene': 'CNMD', 'score': 0.39}, {'connected_gene': 'GC13M052678', 'score': 0.25}]
chr13	GH13I052762	52762630	52762931	0.24	[{'connected_gene': 'MIR759', 'score': 10.69}, {'connected_gene': 'LOC105370209', 'score': 0.44}, {'connected_gene': 'CNMD', 'score': 0.34}]