PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367495	[[146864828, 146865257], [146870599, 146870877], [146875591, 146876101]]	[[146865007, 146865257], [146870599, 146870877], [146875591, 146875741]]
NM_006834	[[146864827, 146865257], [146870599, 146870877], [146875591, 146876092]]	[[146865007, 146865257], [146870599, 146870877], [146875591, 146875741]]

Promoter

Chrom	Start	End	Description
chr6	146864655	146864678	CAGE_peak_6_at_RAB32_5end
chr6	146864707	146864733	CAGE_peak_5_at_RAB32_5end
chr6	146864862	146864881	CAGE_peak_3_at_RAB32_5end
chr6	146864912	146864917	CAGE_peak_4_at_RAB32_5end
chr6	146864935	146864949	CAGE_peak_2_at_RAB32_5end
chr6	146864960	146864999	CAGE_peak_1_at_RAB32_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I146289	146289846	146291114	1.25	[{'connected_gene': 'FBXO30', 'score': 8.95}, {'connected_gene': 'ENSG00000270638', 'score': 4.86}, {'connected_gene': 'RAB32', 'score': 1.95}, {'connected_gene': 'RNA5SP222', 'score': 0.25}, {'connected_gene': 'GC06P146172', 'score': 0.13}, {'connected_gene': 'GRM1', 'score': 0.05}]
chr6	GH06I146912	146912497	146917484	2.07	[{'connected_gene': 'STXBP5-AS1', 'score': 20.73}, {'connected_gene': 'SHPRH', 'score': 19.71}, {'connected_gene': 'ADGB', 'score': 6.76}, {'connected_gene': 'STXBP5', 'score': 4.73}, {'connected_gene': 'RAB32', 'score': 2.84}, {'connected_gene': 'ENSG00000272397', 'score': 0.28}, {'connected_gene': 'LOC105378042', 'score': 0.22}]
chr6	GH06I146434	146434201	146435000	0.43	[{'connected_gene': 'RAB32', 'score': 10.55}, {'connected_gene': 'ENSG00000216811', 'score': 0.2}, {'connected_gene': 'PIR37857', 'score': 0.14}, {'connected_gene': 'GRM1', 'score': 0.04}]
chr6	GH06I146542	146542922	146547769	2.31	[{'connected_gene': 'RAB32', 'score': 553.9}, {'connected_gene': 'SHPRH', 'score': 15.79}, {'connected_gene': 'LOC101928661', 'score': 10.89}, {'connected_gene': 'ADGB', 'score': 10.89}, {'connected_gene': 'GC06M146554', 'score': 0.44}]
chr6	GH06I146700	146700185	146700334	0.69	[{'connected_gene': 'RAB32', 'score': 11.2}, {'connected_gene': 'LOC101928661', 'score': 10.48}, {'connected_gene': 'ADGB', 'score': 10.48}, {'connected_gene': 'LOC105378041', 'score': 0.29}, {'connected_gene': 'RNU6-906P', 'score': 0.21}]
chr6	GH06I146595	146595925	146596400	0.69	[{'connected_gene': 'RAB32', 'score': 11.17}, {'connected_gene': 'LOC101928661', 'score': 0.77}, {'connected_gene': 'GC06M146554', 'score': 0.26}]
chr6	GH06I146337	146337525	146337674	0.2	[{'connected_gene': 'RAB32', 'score': 10.21}, {'connected_gene': 'RNA5SP222', 'score': 0.77}, {'connected_gene': 'GC06P146172', 'score': 0.1}, {'connected_gene': 'GRM1', 'score': 0.05}]
chr6	GH06I146336	146336465	146336554	0.2	[{'connected_gene': 'RAB32', 'score': 10.21}, {'connected_gene': 'RNA5SP222', 'score': 0.77}, {'connected_gene': 'GC06P146172', 'score': 0.1}, {'connected_gene': 'GRM1', 'score': 0.05}]
chr6	GH06I146548	146548897	146549094	1.15	[{'connected_gene': 'LOC101928661', 'score': 10.9}, {'connected_gene': 'ADGB', 'score': 10.9}, {'connected_gene': 'GC06M146554', 'score': 0.44}, {'connected_gene': 'RAB32', 'score': 0.44}]
chr6	GH06I146550	146550924	146551704	0.59	[{'connected_gene': 'LOC101928661', 'score': 10.9}, {'connected_gene': 'ADGB', 'score': 10.9}, {'connected_gene': 'GC06M146554', 'score': 0.77}, {'connected_gene': 'RAB32', 'score': 0.44}]
chr6	GH06I146339	146339673	146340184	0.6	[{'connected_gene': 'RNA5SP222', 'score': 550.77}, {'connected_gene': 'RAB32', 'score': 10.21}, {'connected_gene': 'GC06P146172', 'score': 0.1}, {'connected_gene': 'GRM1', 'score': 0.05}]