PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000283122	[[89688077, 89689924], [89695174, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705603]]	[[89689880, 89689924], [89695174, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705478]]
ENST00000522083	[[89689526, 89689924], [89692309, 89692381], [89695174, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705574]]	[[89689880, 89689924], [89692309, 89692381], [89695174, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705478]]
ENST00000522864	[[89689675, 89689924], [89692309, 89692381], [89695288, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705549]]	[[89689880, 89689924], [89692309, 89692381], [89695288, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705478]]
ENST00000518458	[[89689749, 89689924], [89695174, 89695366], [89701505, 89701616], [89703515, 89703647]]	[[89695363, 89695366], [89701505, 89701616], [89703515, 89703647]]
ENST00000522565	[[89694863, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705574]]	[[89695163, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705478]]
ENST00000522842	[[89701210, 89701616], [89703515, 89703651], [89705461, 89705583]]	[[89701433, 89701616], [89703515, 89703651], [89705461, 89705478]]
NM_001297765	[[89689151, 89689924], [89692309, 89692381], [89695174, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705603]]	[[89689880, 89689924], [89692309, 89692381], [89695174, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705478]]
NM_004365	[[89689151, 89689924], [89695174, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705603]]	[[89689880, 89689924], [89695174, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705478]]
NM_001297768	[[89689151, 89689924], [89692309, 89692381], [89695288, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705603]]	[[89689880, 89689924], [89692309, 89692381], [89695288, 89695366], [89701501, 89701616], [89703515, 89703651], [89705461, 89705478]]

Promoter

Chrom	Start	End	Description
chr5	89705506	89705511	CAGE_peak_3_at_CETN3_5end
chr5	89705520	89705521	CAGE_peak_2_at_CETN3_5end
chr5	89705537	89705610	CAGE_peak_1_at_CETN3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I090439	90439552	90440600	0.97	[{'connected_gene': 'ADGRV1', 'score': 11.76}, {'connected_gene': 'LYSMD3', 'score': 11.76}, {'connected_gene': 'POLR3G', 'score': 11.55}, {'connected_gene': 'MBLAC2', 'score': 11.24}, {'connected_gene': 'LOC731157', 'score': 10.79}, {'connected_gene': 'CETN3', 'score': 10.79}]
chr5	GH05I090408	90408054	90411200	2.09	[{'connected_gene': 'LOC731157', 'score': 550.77}, {'connected_gene': 'CETN3', 'score': 550.77}, {'connected_gene': 'ENSG00000260871', 'score': 0.34}]
chr5	GH05I091376	91376691	91385173	2.62	[{'connected_gene': 'ARRDC3', 'score': 556.65}, {'connected_gene': 'ARRDC3-AS1', 'score': 550.77}, {'connected_gene': 'ENSG00000241059', 'score': 16.41}, {'connected_gene': 'CETN3', 'score': 12.54}, {'connected_gene': 'RPS18P7', 'score': 12.31}, {'connected_gene': 'ENSG00000260871', 'score': 10.39}, {'connected_gene': 'LYSMD3', 'score': 4.55}]
chr5	GH05I090020	90020567	90022350	1.09	[{'connected_gene': 'MBLAC2', 'score': 11.18}, {'connected_gene': 'ENSG00000260871', 'score': 10.86}, {'connected_gene': 'LYSMD3', 'score': 10.52}, {'connected_gene': 'CETN3', 'score': 9.68}, {'connected_gene': 'MIR3660', 'score': 0.77}, {'connected_gene': 'GC05M090101', 'score': 0.18}]
chr5	GH05I090407	90407001	90407200	0.54	[{'connected_gene': 'CETN3', 'score': 0.77}, {'connected_gene': 'ENSG00000260871', 'score': 0.37}]