PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000273857	[[47596014, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47682157, 47682268], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47839966]]	[[47597737, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47682157, 47682268], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47839966]]
ENST00000508498	[[47597498, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47682157, 47682268], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47792237, 47792277]]	[[47597737, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47682157, 47682268], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765595]]
ENST00000502252	[[47597676, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47682157, 47682268], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47808919, 47809064], [47839903, 47840089]]	[[47597737, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47682157, 47682268], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47808919, 47809064], [47839903, 47839966]]
ENST00000505909	[[47597737, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47839966]]	[[47597737, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47839966]]
ENST00000504584	[[47644859, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47840123]]	[[47644914, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47839966]]
ENST00000503821	[[47663504, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47840084]]	None
ENST00000502726	[[47681547, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47840123]]	None
ENST00000515827	[[47625600, 47625762], [47625915, 47625965], [47628421, 47628510], [47634188, 47634469]]	None
ENST00000505754	[[47644857, 47645273], [47647097, 47647211], [47663727, 47663877]]	None
ENST00000510974	[[47788740, 47788942], [47808919, 47809064], [47839389, 47839524]]	None
NM_006587	[[47596014, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47682157, 47682268], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47840123]]	[[47597737, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47682157, 47682268], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47839966]]
NM_001278585	[[47596014, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47808919, 47809064], [47839903, 47840123]]	[[47597737, 47597920], [47602230, 47602364], [47605413, 47605685], [47625587, 47625762], [47625915, 47625965], [47628421, 47628538], [47643936, 47644066], [47645162, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47808919, 47809064], [47839903, 47839966]]
NM_001278586	[[47644851, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47840123]]	[[47644914, 47645273], [47647097, 47647211], [47655569, 47655677], [47663727, 47663873], [47667048, 47667280], [47676409, 47676517], [47679954, 47680071], [47685747, 47685855], [47694986, 47695100], [47746418, 47746600], [47765395, 47765603], [47788741, 47788942], [47808919, 47809064], [47839903, 47839966]]

Promoter

Chrom	Start	End	Description
chr4	47839519	47839528	CAGE_peak_4_at_CORIN_5end
chr4	47840071	47840094	CAGE_peak_1_at_CORIN_5end
chr4	47840112	47840128	CAGE_peak_2_at_CORIN_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I047623	47623470	47624628	0.31	[{'connected_gene': 'ATP10D', 'score': 5.94}, {'connected_gene': 'LOC105374444', 'score': 0.77}, {'connected_gene': 'ENSG00000248254', 'score': 0.21}, {'connected_gene': 'CORIN', 'score': 0.08}]
chr4	GH04I047641	47641352	47644141	0.73	[{'connected_gene': 'GABRA4', 'score': 7.38}, {'connected_gene': 'LOC105374443', 'score': 0.77}, {'connected_gene': 'MIR8053', 'score': 0.44}, {'connected_gene': 'CORIN', 'score': 0.08}]
chr4	GH04I047838	47838984	47839610	0.8	[{'connected_gene': 'CORIN', 'score': 550.77}, {'connected_gene': 'GC04P047839', 'score': 550.77}, {'connected_gene': 'NFXL1', 'score': 54.42}, {'connected_gene': 'CNGA1', 'score': 23.95}, {'connected_gene': 'LOC101927179', 'score': 0.44}]
chr4	GH04I047836	47836400	47838001	1.33	[{'connected_gene': 'CORIN', 'score': 550.77}, {'connected_gene': 'NFXL1', 'score': 55.06}, {'connected_gene': 'CNGA1', 'score': 24.6}, {'connected_gene': 'LOC101927179', 'score': 0.44}]
chr4	GH04I047839	47838056	47838115	0.79	[{'connected_gene': 'CORIN', 'score': 550.77}, {'connected_gene': 'GC04P047839', 'score': 550.77}, {'connected_gene': 'LOC101927179', 'score': 0.44}]
chr4	GH04I047824	47824449	47826035	0.78	[{'connected_gene': 'GC04P047826', 'score': 550.77}, {'connected_gene': 'NFXL1', 'score': 36.19}, {'connected_gene': 'NIPAL1', 'score': 10.86}, {'connected_gene': 'CNGA1', 'score': 5.82}, {'connected_gene': 'CORIN', 'score': 0.39}, {'connected_gene': 'GC04M047659', 'score': 0.16}]