PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000380527	[[19049371, 19051019]]	[[19049657, 19050599]]
NM_006570	[[19049371, 19051023]]	[[19049657, 19050599]]

Promoter

Chrom	Start	End	Description
chr9	19049383	19049460	CAGE_peak_1_at_RRAGA_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I019445	19445063	19447280	0.43	[{'connected_gene': 'HAUS6', 'score': 10.88}, {'connected_gene': 'RPS6', 'score': 6.32}, {'connected_gene': 'RRAGA', 'score': 5.1}, {'connected_gene': 'ENSG00000260912', 'score': 0.44}, {'connected_gene': 'PIR51132', 'score': 0.31}, {'connected_gene': 'ACER2', 'score': 0.26}]
chr9	GH09I019156	19156043	19156192	0.83	[{'connected_gene': 'HAUS6', 'score': 11.54}, {'connected_gene': 'RRAGA', 'score': 5.05}, {'connected_gene': 'PLIN2', 'score': 0.44}, {'connected_gene': 'RPS6P10', 'score': 0.26}]
chr9	GH09I019150	19150393	19155909	1.72	[{'connected_gene': 'RRAGA', 'score': 15.85}, {'connected_gene': 'HAUS6', 'score': 11.54}, {'connected_gene': 'SAXO1', 'score': 9.88}, {'connected_gene': 'PSMC3P1', 'score': 9.86}, {'connected_gene': 'PLIN2', 'score': 2.94}, {'connected_gene': 'RPS6P10', 'score': 0.25}]
chr9	GH09I018975	18975795	18977507	1.2	[{'connected_gene': 'ENSG00000273226', 'score': 79.37}, {'connected_gene': 'DENND4C', 'score': 76.2}, {'connected_gene': 'RPS6P10', 'score': 47.41}, {'connected_gene': 'ENSG00000272842', 'score': 31.11}, {'connected_gene': 'RPS6', 'score': 26.38}, {'connected_gene': 'HAUS6', 'score': 23.48}, {'connected_gene': 'SCARNA8', 'score': 13.44}, {'connected_gene': 'RRAGA', 'score': 9.92}, {'connected_gene': 'PIR34932', 'score': 0.44}, {'connected_gene': 'SAXO1', 'score': 0.19}, {'connected_gene': 'LOC105375985', 'score': 0.18}]
chr9	GH09I019048	19048117	19051201	2.08	[{'connected_gene': 'PIR46202', 'score': 550.77}, {'connected_gene': 'RRAGA', 'score': 550.77}, {'connected_gene': 'SAXO1', 'score': 550.77}, {'connected_gene': 'HAUS6', 'score': 18.79}]