PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000339399	[[100745642, 100745891], [100756912, 100757062], [100760837, 100760960], [100767245, 100767435], [100773552, 100773671], [100774702, 100774754], [100777645, 100778225]]	[[100745837, 100745891], [100756912, 100757062], [100760837, 100760960], [100767245, 100767435], [100773552, 100773671], [100774702, 100774754], [100777645, 100777713]]
ENST00000473205	[[100746873, 100746974], [100756912, 100757062], [100760837, 100760960], [100764557, 100764669], [100767216, 100767417]]	None
ENST00000486769	[[100760895, 100760960], [100767245, 100767580]]	None
NM_006401	[[100745488, 100745891], [100756912, 100757062], [100760837, 100760960], [100767245, 100767435], [100773552, 100773671], [100774702, 100774754], [100777645, 100778225]]	[[100745837, 100745891], [100756912, 100757062], [100760837, 100760960], [100767245, 100767435], [100773552, 100773671], [100774702, 100774754], [100777645, 100777713]]

Promoter

Chrom	Start	End	Description
chr9	100745598	100745609	CAGE_peak_2_at_ANP32B_5end
chr9	100745615	100745648	CAGE_peak_1_at_ANP32B_5end
chr9	100746641	100746654	CAGE_peak_5_at_ANP32B_5end
chr9	100760867	100760887	CAGE_peak_4_at_ANP32B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I097501	97501151	97505818	2.49	[{'connected_gene': 'TMOD1', 'score': 555.57}, {'connected_gene': 'HEMGN', 'score': 6.55}, {'connected_gene': 'VN1R51P', 'score': 6.23}, {'connected_gene': 'ANP32B', 'score': 3.36}, {'connected_gene': 'LOC105376168', 'score': 0.39}]
chr9	GH09I097978	97978484	97979452	0.49	[{'connected_gene': 'HEMGN', 'score': 11.94}, {'connected_gene': 'TRIM14', 'score': 4.6}, {'connected_gene': 'ANP32B', 'score': 0.77}, {'connected_gene': 'GC09P097960', 'score': 0.37}, {'connected_gene': 'PIR49291', 'score': 0.37}]
chr9	GH09I097932	97932895	97944494	1.67	[{'connected_gene': 'HEMGN', 'score': 550.44}, {'connected_gene': 'ENSG00000236896', 'score': 22.76}, {'connected_gene': 'TRMO', 'score': 21.52}, {'connected_gene': 'ANP32B', 'score': 12.13}, {'connected_gene': 'ANKS6', 'score': 4.95}, {'connected_gene': 'FOXE1', 'score': 4.64}]
chr9	GH09I097970	97970179	97970328	0.4	[{'connected_gene': 'HEMGN', 'score': 12.6}, {'connected_gene': 'RNU6-918P', 'score': 11.23}, {'connected_gene': 'ANP32B', 'score': 0.39}, {'connected_gene': 'GC09P097960', 'score': 0.39}, {'connected_gene': 'PIR49291', 'score': 0.39}]
chr9	GH09I097971	97971778	97972446	0.2	[{'connected_gene': 'HEMGN', 'score': 12.78}, {'connected_gene': 'RNU6-918P', 'score': 12.02}, {'connected_gene': 'ANP32B', 'score': 0.39}, {'connected_gene': 'GC09P097960', 'score': 0.39}, {'connected_gene': 'PIR49291', 'score': 0.39}]
chr9	GH09I097969	97969720	97969939	0.31	[{'connected_gene': 'HEMGN', 'score': 12.63}, {'connected_gene': 'RNU6-918P', 'score': 11.23}, {'connected_gene': 'GC09P097960', 'score': 0.44}, {'connected_gene': 'PIR49291', 'score': 0.44}, {'connected_gene': 'ANP32B', 'score': 0.39}]
chr9	GH09I098034	98034491	98038000	1.01	[{'connected_gene': 'NANS', 'score': 24.64}, {'connected_gene': 'TRMO', 'score': 17.67}, {'connected_gene': 'ENSG00000236896', 'score': 12.07}, {'connected_gene': 'ANP32B', 'score': 12.06}, {'connected_gene': 'ENSG00000201830', 'score': 11.87}, {'connected_gene': 'TBC1D2', 'score': 10.52}, {'connected_gene': 'TSTD2', 'score': 4.6}, {'connected_gene': 'RNU6-918P', 'score': 0.77}]
chr9	GH09I098046	98046801	98047000	0.6	[{'connected_gene': 'NANS', 'score': 18.66}, {'connected_gene': 'ENSG00000236896', 'score': 11.65}, {'connected_gene': 'ANP32B', 'score': 11.64}, {'connected_gene': 'TBC1D2', 'score': 10.76}, {'connected_gene': 'TRIM14', 'score': 9.96}, {'connected_gene': 'RNU6-918P', 'score': 0.39}]
chr9	GH09I097990	97989432	97991108	0.85	[{'connected_gene': 'NANS', 'score': 6.01}, {'connected_gene': 'ENSG00000236896', 'score': 0.77}, {'connected_gene': 'ANP32B', 'score': 0.44}, {'connected_gene': 'GC09P098033', 'score': 0.26}]
chr9	GH09I097918	97918311	97924164	2.6	[{'connected_gene': 'TRMO', 'score': 591.45}, {'connected_gene': 'NCBP1', 'score': 52.35}, {'connected_gene': 'TSTD2', 'score': 39.53}, {'connected_gene': 'ZNF322P1', 'score': 24.45}, {'connected_gene': 'NUTM2G', 'score': 23.16}, {'connected_gene': 'MFSD14C', 'score': 22.18}, {'connected_gene': 'ZNF782', 'score': 21.82}, {'connected_gene': 'ANP32B', 'score': 12.67}, {'connected_gene': 'ENSG00000236896', 'score': 12.67}, {'connected_gene': 'HEMGN', 'score': 12.64}, {'connected_gene': 'RNU6-918P', 'score': 12.0}, {'connected_gene': 'ENSG00000254633', 'score': 12.0}, {'connected_gene': 'XPA', 'score': 11.72}, {'connected_gene': 'TRIM14', 'score': 1.76}, {'connected_gene': 'ENSG00000201830', 'score': 0.44}]
chr9	GH09I097929	97929371	97932503	0.58	[{'connected_gene': 'TRMO', 'score': 21.05}, {'connected_gene': 'RNU6-918P', 'score': 12.01}, {'connected_gene': 'ANP32B', 'score': 11.86}, {'connected_gene': 'ENSG00000236896', 'score': 11.85}, {'connected_gene': 'TBC1D2', 'score': 10.41}, {'connected_gene': 'HEMGN', 'score': 0.39}]
chr9	GH09I097925	97925324	97926417	0.52	[{'connected_gene': 'TRMO', 'score': 21.42}, {'connected_gene': 'ANP32B', 'score': 12.5}, {'connected_gene': 'ENSG00000236896', 'score': 12.49}, {'connected_gene': 'RNU6-918P', 'score': 12.01}, {'connected_gene': 'TRIM14', 'score': 10.52}, {'connected_gene': 'TBC1D2', 'score': 10.41}, {'connected_gene': 'NANS', 'score': 6.36}, {'connected_gene': 'HEMGN', 'score': 0.37}]
chr9	GH09I097997	97997501	97998493	0.31	[{'connected_gene': 'RNU6-918P', 'score': 12.46}, {'connected_gene': 'NANS', 'score': 7.24}, {'connected_gene': 'ANP32B', 'score': 0.39}, {'connected_gene': 'ENSG00000236896', 'score': 0.39}, {'connected_gene': 'GC09P098033', 'score': 0.29}]
chr9	GH09I098001	98001328	98003394	0.31	[{'connected_gene': 'RNU6-918P', 'score': 13.15}, {'connected_gene': 'TRMO', 'score': 5.85}, {'connected_gene': 'ENSG00000236896', 'score': 0.39}, {'connected_gene': 'ANP32B', 'score': 0.37}, {'connected_gene': 'GC09P098033', 'score': 0.31}]
chr9	GH09I098003	98003446	98004374	0.2	[{'connected_gene': 'RNU6-918P', 'score': 13.15}, {'connected_gene': 'ENSG00000236896', 'score': 0.37}, {'connected_gene': 'ANP32B', 'score': 0.34}, {'connected_gene': 'GC09P098033', 'score': 0.31}]
chr9	GH09I097924	97924519	97924865	0.72	[{'connected_gene': 'ANP32B', 'score': 12.5}, {'connected_gene': 'ENSG00000236896', 'score': 12.49}, {'connected_gene': 'TRIM14', 'score': 10.52}, {'connected_gene': 'TRMO', 'score': 6.8}, {'connected_gene': 'HEMGN', 'score': 0.34}]
chr9	GH09I097954	97954619	97955407	1.05	[{'connected_gene': 'ANP32B', 'score': 12.65}, {'connected_gene': 'ENSG00000236896', 'score': 12.63}, {'connected_gene': 'GC09P097960', 'score': 0.77}, {'connected_gene': 'PIR49291', 'score': 0.77}, {'connected_gene': 'HEMGN', 'score': 0.39}]
chr9	GH09I097979	97979663	97987948	2.52	[{'connected_gene': 'ANP32B', 'score': 550.77}, {'connected_gene': 'NANS', 'score': 26.5}, {'connected_gene': 'NCBP1', 'score': 23.23}, {'connected_gene': 'MFSD14C', 'score': 22.18}, {'connected_gene': 'ZNF782', 'score': 21.82}, {'connected_gene': 'TSTD2', 'score': 16.66}, {'connected_gene': 'ZNF322P1', 'score': 13.55}, {'connected_gene': 'ENSG00000254633', 'score': 12.0}, {'connected_gene': 'XPA', 'score': 10.81}, {'connected_gene': 'TRMO', 'score': 6.22}, {'connected_gene': 'TRIM14', 'score': 4.69}, {'connected_gene': 'ENSG00000236896', 'score': 0.77}]
chr9	GH09I097988	97988841	97989409	0.38	[{'connected_gene': 'ENSG00000236896', 'score': 550.77}, {'connected_gene': 'TSTD2', 'score': 5.04}, {'connected_gene': 'ANP32B', 'score': 0.44}, {'connected_gene': 'GC09P098033', 'score': 0.26}]
chr9	GH09I098031	98031844	98032728	0.38	[{'connected_gene': 'GC09P098033', 'score': 550.77}, {'connected_gene': 'RNU6-918P', 'score': 550.77}, {'connected_gene': 'ENSG00000236896', 'score': 12.09}, {'connected_gene': 'ANP32B', 'score': 12.07}, {'connected_gene': 'TRMO', 'score': 11.88}, {'connected_gene': 'ENSG00000201830', 'score': 11.87}, {'connected_gene': 'TBC1D2', 'score': 10.51}, {'connected_gene': 'NANS', 'score': 0.34}]
chr9	GH09I098009	98009352	98011288	0.77	[{'connected_gene': 'ENSG00000236896', 'score': 12.1}, {'connected_gene': 'ANP32B', 'score': 12.07}, {'connected_gene': 'HEMGN', 'score': 11.04}, {'connected_gene': 'TBC1D2', 'score': 9.78}, {'connected_gene': 'TRIM14', 'score': 9.7}, {'connected_gene': 'GC09P098033', 'score': 0.34}]
chr9	GH09I098047	98047139	98047288	0.72	[{'connected_gene': 'ENSG00000236896', 'score': 11.65}, {'connected_gene': 'ANP32B', 'score': 11.64}, {'connected_gene': 'TBC1D2', 'score': 10.76}, {'connected_gene': 'TRIM14', 'score': 9.96}, {'connected_gene': 'NANS', 'score': 0.44}, {'connected_gene': 'RNU6-918P', 'score': 0.39}]
chr9	GH09I097958	97958620	97959616	0.93	[{'connected_gene': 'GC09P097960', 'score': 550.77}, {'connected_gene': 'PIR49291', 'score': 550.77}, {'connected_gene': 'ANP32B', 'score': 12.68}, {'connected_gene': 'ENSG00000236896', 'score': 12.65}, {'connected_gene': 'TRMO', 'score': 6.14}, {'connected_gene': 'HEMGN', 'score': 0.39}]
chr9	GH09I097960	97960917	97961392	0.99	[{'connected_gene': 'GC09P097960', 'score': 550.77}, {'connected_gene': 'PIR49291', 'score': 550.77}, {'connected_gene': 'ENSG00000236896', 'score': 22.34}, {'connected_gene': 'ANP32B', 'score': 11.73}, {'connected_gene': 'RNU6-918P', 'score': 10.98}, {'connected_gene': 'TBC1D2', 'score': 9.24}]
chr9	GH09I097993	97992201	97992400	0.58	[{'connected_gene': 'ENSG00000236896', 'score': 0.77}, {'connected_gene': 'ANP32B', 'score': 0.44}, {'connected_gene': 'GC09P098033', 'score': 0.28}]
chr9	GH09I097992	97992801	97993768	0.63	[{'connected_gene': 'ENSG00000236896', 'score': 0.44}, {'connected_gene': 'ANP32B', 'score': 0.39}, {'connected_gene': 'GC09P098033', 'score': 0.28}]
chr9	GH09I097989	97988401	97988600	0.4	[{'connected_gene': 'ENSG00000236896', 'score': 550.77}, {'connected_gene': 'ANP32B', 'score': 0.44}, {'connected_gene': 'GC09P098033', 'score': 0.26}]