PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
ABI2	4	CEP44	2	affinity chromatography technology	Huttlin EL (2017)	1
SYNC	0	GIT2	2	affinity chromatography technology	Huttlin EL (2017)	1
TNIP1	1	PIK3CD	4	affinity chromatography technology	Wang HB (2007)	1
MORF4L1	1	MORF4L2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Sy SM (2009), Huttlin EL (2015), Huttlin EL (2017)	3
PIK3CD	4	PIK3R1	6	pull down, affinity chromatography technology, affinity chromatography technology	Vanhaesebroeck B (1997), Vanhaesebroeck B (1997), Hein MY (2015)	3
TNIP1	1	TBK1	1	affinity chromatography technology, affinity chromatography technology	Gao L (2011), Gao L (2011)	2
NFKB1	2	TNFAIP3	3	affinity chromatography technology	Lapid D (2017)	1
TNF	0	TNFAIP3	3	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Skaug B (2011), Tokunaga F (2012), Verhelst K (2012), Yamaguchi N (2015), Draber P (2015)	5
OFD1	3	TXLNA	3	bioid	Gupta GD (2015)	1
IKBKE	2	UBC	7	affinity chromatography technology, pull down, affinity chromatography technology	Rajsbaum R (2014), Paz S (2009), Bharaj P (2016)	3
IKBKE	2	TRAF3	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ng MH (2011), Charoenthongtrakul S (2013), Peng Y (2014), Gu L (2017), Fang R (2017)	5
RNF11	0	IKBKG	0	two hybrid	Colland F (2004)	1
SUMO2	0	TNIP1	1	two hybrid	Wang J (2011)	1
IKBKG	0	TBK1	1	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bouwmeester T (2004), Fenner BJ (2010), Li S (2011), Wang L (2012), Wang L (2012), Ran Y (2016), Huttlin EL (2017)	7
CEP44	2	TBK1	1	bioid	Gupta GD (2015)	1
CEP135	2	CEP152	2	bioid	Gupta GD (2015)	1
FUS	0	TNIP1	1	two hybrid	Wang J (2011)	1
SAMD4A	3	TNIP1	1	affinity chromatography technology	Huttlin EL (2017)	1
TNFAIP3	3	TRAF1	0	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Song HY (1996), Song HY (1996), Heyninck K (1999), Greenfeld H (2015), Greenfeld H (2015)	5
TBK1	1	IKBKE	2	affinity chromatography technology, pull down, affinity chromatography technology, pull down	Li S (2011), Ikeda F (2007), Liu D (2015), Liu D (2015)	4
PCM1	5	MCM10	2	affinity chromatography technology, bioid	Gupta GD (2015), Gupta GD (2015)	2
PCM1	5	ABI2	4	two hybrid	Rual JF (2005)	1
PCM1	5	TTF2	4	bioid	Gupta GD (2015)	1
NINL	1	TTF2	4	bioid	Gupta GD (2015)	1
UBC	7	GTF2H1	0	pull down	Zhu Q (2004)	1
MORF4L2	0	TNIP1	1	two hybrid	Rolland T (2014)	1
CENPJ	6	SSX2IP	0	bioid	Gupta GD (2015)	1
KIFC3	3	ABI2	4	two hybrid	Rolland T (2014)	1
TRAF1	0	TBK1	1	affinity chromatography technology, affinity chromatography technology	Greenfeld H (2015), Huttlin EL (2017)	2
TNIP1	1	RALBP1	2	two hybrid	Rolland T (2014)	1
SELPLG	0	PIK3R1	6	affinity chromatography technology	Wang HB (2007)	1
RBFOX1	1	TNIP1	1	two hybrid	Lim J (2006)	1
NFKB1	2	TNIP3	3	affinity chromatography technology	Bouwmeester T (2004)	1
TNF	0	TNIP1	1	affinity chromatography technology	Haas TL (2009)	1
IKBKG	0	TRAF3	1	affinity chromatography technology	Belgnaoui SM (2012)	1
NAB2	2	TNIP1	1	affinity chromatography technology	Huttlin EL (2017)	1
TNIP1	1	CCDC121	0	two hybrid	Yu H (2011)	1
OPTN	1	IKBKG	0	affinity chromatography technology	Nakazawa S (2016)	1
ODF2	1	CEP135	2	bioid	Gupta GD (2015)	1
ADH6	1	TNIP1	1	two hybrid	Wang J (2011)	1
TNIP1	1	POTEF	1	affinity chromatography technology	Huttlin EL (2017)	1
TNIP1	1	GABARAPL1	0	two hybrid	Rolland T (2014)	1
PDCD6	2	NFKB1	2	affinity chromatography technology	McGourty CA (2016)	1
TRAF3	1	TNIP1	1	affinity chromatography technology	Gao L (2011)	1
NME7	0	OFD1	3	two hybrid, bioid	Wang J (2011), Gupta GD (2015)	2
CEP152	2	TNIP1	1	bioid	Gupta GD (2015)	1
TNF	0	RALBP1	2	affinity chromatography technology	Micheau O (2003)	1
SUMO2	0	TRAF1	0	pull down	Ouyang J (2009)	1
PIN1	0	TNIP1	1	two hybrid, two hybrid	Wang J (2011), Rolland T (2014)	2
MYD88	1	TNIP1	1	affinity chromatography technology, affinity chromatography technology	Zhou J (2011), Zhou J (2011)	2
IKBKG	0	IKBKE	2	affinity chromatography technology, affinity chromatography technology	Zhao T (2007), Zhou AY (2013)	2
NINL	1	MCM10	2	two hybrid, bioid	Rual JF (2005), Gupta GD (2015)	2
IKBIP	2	PDCD6	2	biochemical	Havugimana PC (2012)	1
CEP135	2	CEP97	0	bioid	Gupta GD (2015)	1
RNF11	0	TNIP1	1	two hybrid	Colland F (2004)	1
RBFOX1	1	FAM168A	0	two hybrid	Corominas R (2014)	1
EHHADH	1	TRAF1	0	two hybrid	Rolland T (2014)	1
SSX2IP	0	NME7	0	bioid	Gupta GD (2015)	1
TNIP1	1	NIFK	1	two hybrid	Rolland T (2014)	1
TNFAIP3	3	UBC	7	x-ray crystallography, enzymatic study, pull down, pull down, x-ray crystallography, pull down, enzymatic study, enzymatic study, enzymatic study, pull down, pull down, enzymatic study, x-ray crystallography, pull down	Bosanac I (2010), Bremm A (2010), Fenner BJ (2009), Tokunaga F (2012), Tokunaga F (2012), Verhelst K (2012), Mevissen TE (2013), Komander D (2009), Evans PC (2004), Skaug B (2011), Bohgaki M (2008), Boone DL (2004), Mevissen TE (2016), Mevissen TE (2016)	14
IKBIP	2	ABI2	4	affinity chromatography technology	Huttlin EL (2017)	1
TAX1BP1	3	FAM168A	0	two hybrid	Rolland T (2014)	1
MAP1LC3B	1	UBC	7	imaging technique	Liu X (2017)	1
TNIP1	1	MAP1LC3B	1	two hybrid	Rolland T (2014)	1
TNF	0	IKBKG	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Haas TL (2009), Ea CK (2006), Tokunaga F (2012), Verhelst K (2012), Draber P (2015), Pescatore A (2016)	6
CENPJ	6	CEP97	0	bioid, bioid, bioid	Firat-Karalar EN (2014), Gupta GD (2015), Gupta GD (2015)	3
GTF2B	1	TNIP1	1	two hybrid	Rolland T (2014)	1
RARG	2	RARA	5	affinity chromatography technology	Huttlin EL (2017)	1
TNIP1	1	CDIP1	1	two hybrid, two hybrid	Rolland T (2014), Yu H (2011)	2
MAP1LC3B	1	GABARAPL2	0	pull down	Maruyama Y (2014)	1
TRAF1	0	TNIP1	1	affinity chromatography technology	Greenfeld H (2015)	1
UBC	7	TNIP1	1	affinity chromatography technology, x-ray crystallography, pull down, pull down, pull down, pull down	Wagner S (2008), Wagner S (2008), Fenner BJ (2009), Verhelst K (2012), Zhang X (2017), Kliza K (2017)	6
IKBKE	2	RNF11	0	affinity chromatography technology, affinity chromatography technology	Charoenthongtrakul S (2013), Charoenthongtrakul S (2013)	2
PCM1	5	NDC80	4	affinity chromatography technology, bioid	Gupta GD (2015), Gupta GD (2015)	2
CEP44	2	TXLNA	3	two hybrid	Rolland T (2014)	1
OFD1	3	NDC80	4	bioid	Gupta GD (2015)	1
TNIP1	1	MAPK1	1	two hybrid, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology	Zhang S (2002), Zhang S (2002), Zhang S (2002), Wang J (2011), Chen Y (2015), Chen Y (2015)	6
PCM1	5	CEP97	0	bioid	Gupta GD (2015)	1
SSX2IP	0	OFD1	3	bioid, bioid, affinity chromatography technology	Gupta GD (2015), Gupta GD (2015), Hein MY (2015)	3
PCM1	5	TNIP1	1	bioid	Gupta GD (2015)	1
NFKB1	2	IKBKG	0	affinity chromatography technology, pull down	Bouwmeester T (2004), Smolle M (2004)	2
MAPK1	1	MAP3K1	4	affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study	Karandikar M (2000), Karandikar M (2000), Gallagher ED (2004), Tu Z (2003), Loke J (2014)	5
CEP135	2	TBK1	1	bioid	Gupta GD (2015)	1
OFD1	3	TNIP1	1	bioid	Gupta GD (2015)	1
XPO1	8	GABARAPL1	0	affinity chromatography technology	Kirli K (2015)	1
NINL	1	NME7	0	bioid	Gupta GD (2015)	1
MAP1LC3A	0	UBC	7	biochemical, imaging technique	Fujita N (2013), Govindaraju VK (2017)	2
PDCD6	2	UBC	7	affinity chromatography technology	McGourty CA (2016)	1
KIFC3	3	TNIP1	1	two hybrid	Rolland T (2014)	1
IKBKG	0	TAX1BP1	3	two hybrid	Wang J (2011)	1
TNIP1	1	SELPLG	0	affinity chromatography technology, affinity chromatography technology, two hybrid	Wang HB (2007), Wang HB (2007), Wang HB (2007)	3
SYNC	0	IKBKG	0	affinity chromatography technology	Huttlin EL (2017)	1
XPO1	8	TTF2	4	affinity chromatography technology	Kirli K (2015)	1
IKBKE	2	TNFAIP3	3	affinity chromatography technology, affinity chromatography technology	Gao L (2011), Saitoh T (2005)	2
IKBKE	2	MYD88	1	affinity chromatography technology	Zhou AY (2013)	1
TNIP1	1	ZNHIT1	0	two hybrid	Rolland T (2014)	1
PIGT	3	TNIP1	1	affinity chromatography technology	Huttlin EL (2017)	1
ODF2	1	TNIP1	1	bioid	Gupta GD (2015)	1
XPO1	8	AP1M1	3	affinity chromatography technology	Kirli K (2015)	1
PCM1	5	TXLNA	3	bioid	Gupta GD (2015)	1
MAP3K1	4	ODF2	1	enzymatic study	Charlaftis N (2014)	1
ODF2	1	NME7	0	bioid	Gupta GD (2015)	1
TNIP1	1	CCDC112	4	two hybrid	Rolland T (2014)	1
TNIP1	1	GABARAPL2	0	two hybrid	Rolland T (2014)	1
TNIP1	1	NFKB1	2	affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology	Cohen S (2009), Cohen S (2009), Wang J (2011), Li X (2015)	4
CEP135	2	PCM1	5	bioid, affinity chromatography technology	Gupta GD (2015), Hein MY (2015)	2
ABI2	4	TNIP1	1	affinity chromatography technology	Huttlin EL (2017)	1
TAX1BP1	3	TBK1	1	affinity chromatography technology, affinity chromatography technology	Gao L (2011), Goodwin JM (2017)	2
TNIP1	1	SYT6	1	two hybrid	Rolland T (2014)	1
NINL	1	TBK1	1	bioid	Gupta GD (2015)	1
GIT2	2	TNIP1	1	affinity chromatography technology, two hybrid	Wang J (2011), Wang J (2011)	2
EXOC1	3	GIT2	2	affinity chromatography technology	Huttlin EL (2017)	1
FBF1	2	TXLNA	3	bioid	Gupta GD (2015)	1
RALBP1	2	IKBKG	0	imaging technique	Chen TC (2014)	1
EFEMP1	1	TNIP1	1	two hybrid	Wang J (2011)	1
XPO1	8	NFKB1	2	affinity chromatography technology	Kirli K (2015)	1
IKBKG	0	TRAF1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Greenfeld H (2015), Greenfeld H (2015), Abdul-Sater AA (2017)	3
TNIP1	1	NDC80	4	two hybrid	Rolland T (2014)	1
MAP1LC3A	0	OPTN	1	two hybrid, affinity chromatography technology, pull down, pull down	Wild P (2011), Wild P (2011), Liu Z (2014), Wild P (2011)	4
PCM1	5	CCDC112	4	bioid	Gupta GD (2015)	1
OFD1	3	MCM10	2	affinity chromatography technology	Hein MY (2015)	1
RABAC1	0	TNIP1	1	two hybrid	Wang J (2011)	1
TNF	0	OPTN	1	affinity chromatography technology	Klingseisen L (2012)	1
PCM1	5	NME7	0	bioid	Gupta GD (2015)	1
UBC	7	TTF2	4	pull down	Zhang X (2017)	1
TCEA2	1	CEP44	2	two hybrid	Rolland T (2014)	1
CEP135	2	TXLNA	3	bioid	Gupta GD (2015)	1
TRAF1	0	FBF1	2	two hybrid, two hybrid	Rolland T (2014), Yu H (2011)	2
ODF2	1	OFD1	3	bioid	Gupta GD (2015)	1
HAO2	1	TNIP1	1	affinity chromatography technology	Huttlin EL (2017)	1
CDKN1A	1	TNIP1	1	two hybrid	Wang J (2011)	1
EHHADH	1	SSX2IP	0	two hybrid	Rolland T (2014)	1
ODF2	1	SSX2IP	0	bioid	Gupta GD (2015)	1
TNIP1	1	TNIP1	1	two hybrid, two hybrid	Wang J (2011), Rolland T (2014)	2
IKBKG	0	MCM10	2	pull down	Fenner BJ (2010)	1
OFD1	3	KIFC3	3	affinity chromatography technology	Hein MY (2015)	1
ERP44	1	TNIP1	1	affinity chromatography technology	Huttlin EL (2017)	1
EXOC1	3	NDC80	4	affinity chromatography technology	Huttlin EL (2017)	1
FBF1	2	TNIP1	1	bioid	Gupta GD (2015)	1
CENPJ	6	TNIP1	1	bioid	Gupta GD (2015)	1
NINL	1	FAM161A	2	two hybrid	Rolland T (2014)	1
TNIP1	1	TAX1BP1	3	affinity chromatography technology, affinity chromatography technology, two hybrid	Gao L (2011), Gao L (2011), Rolland T (2014)	3
XPO1	8	TBK1	1	affinity chromatography technology	Kirli K (2015)	1
CEP135	2	CEP44	2	bioid	Gupta GD (2015)	1
ODF2	1	TBK1	1	bioid	Gupta GD (2015)	1
OFD1	3	PCM1	5	affinity chromatography technology, affinity chromatography technology, bioid, bioid, affinity chromatography technology	Gupta GD (2015), Gupta GD (2015), Gupta GD (2015), Gupta GD (2015), Hein MY (2015)	5
BYSL	3	TNIP1	1	two hybrid	Rolland T (2014)	1
PCM1	5	FUS	0	affinity chromatography technology	Akimov V (2011)	1
CDKN1A	1	IKBKG	0	two hybrid	Journo C (2009)	1
TNIP1	1	CFAP53	0	two hybrid	Rolland T (2014)	1
MCM10	2	CDKN1A	1	pull down	Ramachandran N (2004)	1
TCEA2	1	FBF1	2	two hybrid	Stelzl U (2005)	1
NFKB1	2	TBK1	1	affinity chromatography technology	Bouwmeester T (2004)	1
NAB2	2	MORF4L1	1	two hybrid	Rolland T (2014)	1
FUS	0	UBC	7	affinity chromatography technology	Wang T (2014)	1
XPO1	8	BYSL	3	affinity chromatography technology	Kirli K (2015)	1
ODF2	1	CEP97	0	bioid	Gupta GD (2015)	1
TYRO3	4	PIK3R1	6	two hybrid, affinity chromatography technology	Lan Z (2000), Lan Z (2000)	2
NINL	1	PCM1	5	bioid	Gupta GD (2015)	1
UBC	7	TAX1BP1	3	pull down, x-ray crystallography, pull down, pull down	Fenner BJ (2009), Tumbarello DA (2015), Tumbarello DA (2015), Zhang X (2017)	4
NINL	1	TNIP1	1	bioid	Gupta GD (2015)	1
TNIP1	1	MCM10	2	two hybrid	Yu H (2011)	1
TNIP1	1	TYRO3	4	two hybrid	Yu H (2011)	1
CDKN1A	1	TRAF1	0	two hybrid	Rolland T (2014)	1
TRAF1	0	UBC	7	affinity chromatography technology	Greenfeld H (2015)	1
RNF11	0	TNFAIP3	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid	Shembade N (2009), Pranski EL (2012), Kelly C (2012), Colland F (2004)	4
IKBKG	0	SSX2IP	0	two hybrid	Wang J (2011)	1
TRAF1	0	ABHD17A	1	two hybrid	Yu H (2011)	1
OPTN	1	TNIP1	1	two hybrid, two hybrid, two hybrid, affinity chromatography technology	Wang J (2011), Rolland T (2014), Yu H (2011), Huttlin EL (2017)	4
FBF1	2	PCM1	5	bioid	Gupta GD (2015)	1
GIT2	2	IKBKG	0	affinity chromatography technology, two hybrid	Wang J (2011), Wang J (2011)	2
GABARAPL1	0	OPTN	1	two hybrid, affinity chromatography technology, pull down	Wild P (2011), Wild P (2011), Wild P (2011)	3
SSX2IP	0	TBK1	1	bioid	Gupta GD (2015)	1
PDCD6	2	TNIP1	1	affinity chromatography technology	McGourty CA (2016)	1
GTF2H1	0	TNIP1	1	two hybrid	Wang J (2011)	1
TNIP1	1	RARA	5	two hybrid	Gurevich I (2009)	1
TAX1BP1	3	TNIP3	3	two hybrid	Rolland T (2014)	1
CEP152	2	TBK1	1	bioid	Gupta GD (2015)	1
IKBIP	2	EXOC1	3	affinity chromatography technology	Huttlin EL (2017)	1
TTF2	4	TNIP1	1	two hybrid	Leonard D (2003)	1
CENPJ	6	OFD1	3	bioid	Gupta GD (2015)	1
TNIP1	1	PNKP	3	two hybrid	Rolland T (2014)	1
XPO1	8	CEP97	0	affinity chromatography technology	Kirli K (2015)	1
MAPK1	1	RARA	5	enzymatic study, affinity chromatography technology	Dwivedi PP (2002), Dwivedi PP (2002)	2
PCM1	5	ODF2	1	bioid, bioid	Gupta GD (2015), Gupta GD (2015)	2
TNIP1	1	MAGEB18	0	two hybrid, affinity chromatography technology, two hybrid	Rual JF (2005), Rual JF (2005), Rolland T (2014)	3
TNFAIP3	3	TNIP1	1	affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, two hybrid	Heyninck K (1999), Heyninck K (1999), Bohgaki M (2008), Klinkenberg M (2001), Heyninck K (2003), Wang J (2011), Rodriguez MS (2014), Rolland T (2014)	8
SSX2IP	0	TNIP1	1	bioid	Gupta GD (2015)	1
OPTN	1	GABARAPL2	0	pull down	Wild P (2011)	1
NINL	1	CENPJ	6	bioid	Gupta GD (2015)	1
NINL	1	OFD1	3	bioid	Gupta GD (2015)	1
IKBKG	0	TNFAIP3	3	two hybrid, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology	Zhang SQ (2000), Zhang SQ (2000), Skaug B (2011), Skaug B (2011), Klinkenberg M (2001), Verhelst K (2012), Verhelst K (2012), Wang J (2011), Zilberman-Rudenko J (2016)	9
TAX1BP1	3	IKBKE	2	affinity chromatography technology	Gao L (2011)	1
NDC80	4	TXLNA	3	two hybrid	Rolland T (2014)	1
TRAF1	0	TRAF3	1	affinity chromatography technology, affinity chromatography technology	Pullen SS (1998), Greenfeld H (2015)	2
OPTN	1	TBK1	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, imaging technique, two hybrid, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, enzymatic study, imaging technique, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology	Li S (2011), Li S (2011), Li S (2011), Mankouri J (2010), Mankouri J (2010), Mankouri J (2010), Morton S (2008), Morton S (2008), Freischmidt A (2015), Freischmidt A (2015), Heo JM (2015), Heo JM (2015), Genin P (2015), Genin P (2015), Richter B (2016), Richter B (2016), Richter B (2016), Pourcelot M (2016)	18
TNF	0	TBK1	1	affinity chromatography technology	Kuai J (2004)	1
TNIP1	1	FAM168A	0	two hybrid	Rolland T (2014)	1
TAX1BP1	3	OPTN	1	affinity chromatography technology, affinity chromatography technology	Journo C (2009), Journo C (2009)	2
NINL	1	TXLNA	3	bioid	Gupta GD (2015)	1
TNIP1	1	IKBKE	2	affinity chromatography technology, affinity chromatography technology	Gao L (2011), Gao L (2011)	2
BYSL	3	SSX2IP	0	two hybrid	Rolland T (2014)	1
TNIP1	1	PIK3R1	6	affinity chromatography technology	Wang HB (2007)	1
TRAF3	1	TBK1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Kayagaki N (2007), Mankouri J (2010), Mankouri J (2010), Tzieply N (2012), Wang Y (2012), Ng MH (2011), Charoenthongtrakul S (2013), van Zuylen WJ (2012), van Zuylen WJ (2012), Karim R (2013), Chen X (2014), Peng Y (2014), Wang S (2013), Zhou Y (2016), Cai B (2017), Fang R (2017), Fang R (2017)	17
CEP135	2	TNIP1	1	bioid	Gupta GD (2015)	1
PCM1	5	CENPJ	6	bioid, bioid, affinity chromatography technology	Gupta GD (2015), Gupta GD (2015), Hein MY (2015)	3
TNFAIP3	3	TNIP3	3	affinity chromatography technology, two hybrid	Wullaert A (2007), Rolland T (2014)	2
CORO6	2	TNIP1	1	affinity chromatography technology	Huttlin EL (2017)	1
MAP1LC3B	1	TBK1	1	pull down	Wild P (2011)	1
TXLNA	3	FUS	0	biochemical	Wan C (2015)	1
OFD1	3	TBK1	1	bioid	Gupta GD (2015)	1
CEP152	2	PCM1	5	bioid	Gupta GD (2015)	1
OPTN	1	UBC	7	affinity chromatography technology, pull down, pull down, pull down, two hybrid, pull down, pull down, pull down, pull down, pull down, pull down, pull down, enzymatic study, pull down, pull down, pull down, pull down, pull down	Wild P (2011), Fenner BJ (2009), Zhu G (2007), Zhu G (2007), Wagner S (2008), Gleason CE (2011), Nagabhushana A (2011), Korac J (2012), Wild P (2011), Tumbarello DA (2015), Heo JM (2015), Ordureau A (2015), Richter B (2016), Richter B (2016), Nakazawa S (2016), Zhang X (2017), Kliza K (2017), Bansal M (2018)	18
TCEA2	1	TAX1BP1	3	two hybrid	Rolland T (2014)	1
TBK1	1	TXLNA	3	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology	Li S (2011), Li S (2011), Li S (2011), Li S (2011), Huttlin EL (2017)	5
MYD88	1	TRAF3	1	affinity chromatography technology	Zhou J (2011)	1
UBC	7	SUMO2	0	affinity chromatography technology	Sahin U (2014)	1
CEP135	2	SSX2IP	0	bioid, affinity chromatography technology	Gupta GD (2015), Hein MY (2015)	2
ZBTB25	2	TNIP1	1	two hybrid	Rolland T (2014)	1
NINL	1	CCDC112	4	bioid	Gupta GD (2015)	1
TAX1BP1	3	GABARAPL1	0	two hybrid	Tumbarello DA (2015)	1
RNF11	0	OPTN	1	two hybrid	Colland F (2004)	1
SUMO2	0	ZBTB25	2	pull down	Ouyang J (2009)	1
CEP44	2	OFD1	3	bioid	Gupta GD (2015)	1
FAM161A	2	SSX2IP	0	two hybrid	Rolland T (2014)	1
NAB2	2	NME7	0	two hybrid	Rolland T (2014)	1
CDKN1A	1	OPTN	1	two hybrid, affinity chromatography technology, affinity chromatography technology	Journo C (2009), Journo C (2009), Journo C (2009)	3
XPO1	8	SAMD4A	3	affinity chromatography technology	Kirli K (2015)	1
FBF1	2	OFD1	3	bioid	Gupta GD (2015)	1
EHHADH	1	TNIP1	1	two hybrid	Rolland T (2014)	1
TNIP1	1	TXLNA	3	two hybrid	Rolland T (2014)	1
IKBKG	0	MYD88	1	pull down	Emmerich CH (2013)	1
TNIP1	1	MOB1B	0	two hybrid	Rolland T (2014)	1
TNIP1	1	MAGEH1	0	two hybrid	Rolland T (2014)	1
TNIP1	1	RARG	2	two hybrid	Gurevich I (2009)	1
MAPK10	0	TNIP1	1	two hybrid	Wang J (2011)	1
SYNC	0	NDC80	4	affinity chromatography technology	Huttlin EL (2017)	1
RNF11	0	GTF2H1	0	affinity chromatography technology	Poulsen SL (2013)	1
TNIP1	1	TCEANC2	0	two hybrid	Rolland T (2014)	1
UBC	7	IKBKG	0	pull down, affinity chromatography technology, affinity chromatography technology, unspecified method, pull down, x-ray crystallography, pull down, unspecified method, x-ray crystallography, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, pull down, x-ray crystallography, pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down, two hybrid, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Dynek JN (2010), Dynek JN (2010), Chiaravalli J (2011), Laplantine E (2009), Hubeau M (2011), Lo YC (2009), Ikeda F (2010), Cordier F (2009), Cordier F (2009), Cordier F (2009), Renner F (2011), Fenner BJ (2009), Fenner BJ (2009), Ivins FJ (2009), Rahighi S (2009), Rahighi S (2009), Zhu G (2007), Zhu G (2007), Niu J (2011), Keusekotten K (2013), van Wijk SJ (2013), Hooper C (2014), Wagner S (2008), Saul VV (2014), Gleason CE (2011), Komander D (2009), Kensche T (2012), Skaug B (2011), Ea CK (2006), Ea CK (2006), Lo YC (2009), Laplantine E (2009), Laplantine E (2009), Emmerich CH (2013), Dubosclard V (2015), Vincendeau M (2015), Vincendeau M (2016), Zhang X (2017), Fang R (2017), Kliza K (2017), Joo D (2016), Fang R (2017), Hauenstein AV (2017)	43
TRAF3	1	TAX1BP1	3	affinity chromatography technology	Gao L (2011)	1
CEP135	2	OFD1	3	bioid, affinity chromatography technology	Gupta GD (2015), Hein MY (2015)	2
XPO1	8	MAP3K1	4	affinity chromatography technology	Kirli K (2015)	1
MAP1LC3A	0	GABARAPL1	0	imaging technique	Tanida I (2006)	1
FUS	0	ERP44	1	affinity chromatography technology	Wang T (2014)	1
TNIP1	1	SNIP1	0	two hybrid	Rolland T (2014)	1
TRAF1	0	FAM161A	2	two hybrid	Rolland T (2014)	1
CEP152	2	TTF2	4	bioid	Gupta GD (2015)	1
XPO1	8	PDCD6	2	affinity chromatography technology	Kirli K (2015)	1
TAX1BP1	3	GABARAPL2	0	two hybrid	Tumbarello DA (2015)	1
TNIP1	1	MAP1LC3A	0	two hybrid	Rolland T (2014)	1
BYSL	3	CEP44	2	two hybrid	Rolland T (2014)	1
TCEA2	1	TNIP1	1	two hybrid, two hybrid	Rolland T (2014), Yu H (2011)	2
NME7	0	TNIP1	1	two hybrid, two hybrid, two hybrid	Wang J (2011), Rolland T (2014), Yu H (2011)	3
CEP152	2	TXLNA	3	bioid	Gupta GD (2015)	1
ODF2	1	CEP44	2	bioid	Gupta GD (2015)	1
TNIP1	1	MORF4L1	1	two hybrid	Rolland T (2014)	1
IKBKG	0	TNIP1	1	affinity chromatography technology, affinity chromatography technology, two hybrid	Ashida H (2010), Wagner S (2008), Wang J (2011)	3
TNIP1	1	ABHD17A	1	two hybrid	Yu H (2011)	1
FBF1	2	SSX2IP	0	two hybrid, bioid	Rolland T (2014), Gupta GD (2015)	2
PIN1	0	RARA	5	pull down	Brondani V (2005)	1
RNF11	0	TAX1BP1	3	affinity chromatography technology, two hybrid	Shembade N (2009), Colland F (2004)	2
GIT2	2	TRAF1	0	affinity chromatography technology, two hybrid	Wang J (2011), Wang J (2011)	2
AP1M1	3	TNIP1	1	two hybrid	Rolland T (2014)	1
IKBIP	2	TNIP1	1	affinity chromatography technology	Huttlin EL (2017)	1
OPTN	1	TRAF3	1	affinity chromatography technology, affinity chromatography technology	Mankouri J (2010), Mankouri J (2010)	2
TNIP1	1	VPS33B	2	two hybrid	Rolland T (2014)	1
GABARAPL1	0	GABARAPL2	0	affinity chromatography technology	Behrends C (2010)	1
TNIP1	1	HDDC3	1	two hybrid	Rolland T (2014)	1
XPO1	8	TNIP1	1	affinity chromatography technology	Kirli K (2015)	1
TNIP1	1	TNIP3	3	two hybrid	Rolland T (2014)	1
CEP97	0	TNIP1	1	bioid	Gupta GD (2015)	1
NAB2	2	PIN1	0	two hybrid	Rolland T (2014)	1
RNF11	0	UBC	7	two hybrid, two hybrid	Li H (2004), Colland F (2004)	2
TNFAIP3	3	TBK1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Sowa ME (2009), Gao L (2011), Saitoh T (2005)	3
CEP152	2	CENPJ	6	bioid	Firat-Karalar EN (2014)	1
XPO1	8	SSX2IP	0	affinity chromatography technology	Kirli K (2015)	1
GIT2	2	TNFAIP3	3	two hybrid	Wang J (2011)	1
TNIP1	1	FAM161A	2	two hybrid	Rolland T (2014)	1
MAP3K1	4	TNIP1	1	enzymatic study	Charlaftis N (2014)	1
MAP1LC3B	1	OPTN	1	imaging technique, unspecified method, pull down, x-ray crystallography, affinity chromatography technology, pull down	Wild P (2011), Wild P (2011), Rogov VV (2013), Rogov VV (2013), Rogov VV (2013), Wild P (2011)	6
TNIP1	1	MOB3C	2	two hybrid	Rolland T (2014)	1
UBC	7	TNIP3	3	affinity chromatography technology, two hybrid	Wagner S (2008), Wagner S (2008)	2
TBK1	1	RNF11	0	affinity chromatography technology, affinity chromatography technology	Charoenthongtrakul S (2013), Charoenthongtrakul S (2013)	2
NINL	1	CEP97	0	bioid	Gupta GD (2015)	1
CEP135	2	NME7	0	bioid	Gupta GD (2015)	1
PIN1	0	TRAF1	0	two hybrid	Rolland T (2014)	1
IKBKG	0	TYRO3	4	pull down	Fenner BJ (2010)	1
EXOC1	3	TNIP1	1	affinity chromatography technology	Huttlin EL (2017)	1
CEP44	2	TNIP1	1	bioid	Gupta GD (2015)	1
CCNG1	1	TNIP1	1	affinity chromatography technology, two hybrid, two hybrid, two hybrid	Wang J (2011), Wang J (2011), Rolland T (2014), Yu H (2011)	4
AP1M1	3	SSX2IP	0	two hybrid	Rolland T (2014)	1
CRHBP	2	TNIP1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MAP1LC3B	1	MAP1LC3A	0	affinity chromatography technology	Behrends C (2010)	1
GRAP2	0	TNIP1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SYNC	0	TNIP1	1	affinity chromatography technology	Huttlin EL (2017)	1
CEP44	2	FAM161A	2	two hybrid	Rolland T (2014)	1
MAP1LC3B	1	TAX1BP1	3	pull down, two hybrid	Newman AC (2012), Tumbarello DA (2015)	2
CEP152	2	OFD1	3	bioid	Gupta GD (2015)	1
PIN1	0	ABI2	4	two hybrid	Rolland T (2014)	1
TNF	0	UBC	7	affinity chromatography technology, affinity chromatography technology	Haas TL (2009), Fritsch J (2014)	2
TNFAIP3	3	TAX1BP1	3	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	De Valck D (1999), De Valck D (1999), Klinkenberg M (2001), Kelly C (2012), Huttlin EL (2017)	5
PCM1	5	SSX2IP	0	affinity chromatography technology, affinity chromatography technology, bioid, bioid	Gupta GD (2015), Gupta GD (2015), Gupta GD (2015), Gupta GD (2015)	4