PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000379661	[[57769641, 57769767], [57770889, 57771195], [57775598, 57775729], [57778305, 57778423], [57784738, 57784839], [57785172, 57785214], [57785552, 57785636], [57785851, 57785967], [57786441, 57786513], [57786689, 57786840], [57786988, 57787179], [57787300, 57787431], [57787856, 57787907], [57788841, 57788909], [57789030, 57789150], [57789256, 57789406], [57789752, 57789829], [57789903, 57789978], [57790267, 57790384], [57790725, 57791162]]	[[57771155, 57771195], [57775598, 57775729], [57778305, 57778423], [57784738, 57784839], [57785172, 57785214], [57785552, 57785636], [57785851, 57785967], [57786441, 57786513], [57786689, 57786840], [57786988, 57787179], [57787300, 57787431], [57787856, 57787907], [57788841, 57788909], [57789030, 57789150], [57789256, 57789406], [57789752, 57789829], [57789903, 57789978], [57790267, 57790384], [57790725, 57790858]]
ENST00000562592	[[57769650, 57769767], [57770889, 57770975], [57771137, 57771195], [57775598, 57775729], [57778305, 57778423], [57784738, 57784839], [57785172, 57785214], [57785552, 57785636], [57785851, 57785967]]	[[57771155, 57771195], [57775598, 57775729], [57778305, 57778423], [57784738, 57784839], [57785172, 57785214], [57785552, 57785636], [57785851, 57785967]]
ENST00000566726	[[57769702, 57769767], [57770889, 57770979], [57775598, 57775729], [57778305, 57778423], [57784738, 57784839], [57785172, 57785214], [57785552, 57785636], [57785851, 57785948]]	[[57770927, 57770979], [57775598, 57775729], [57778305, 57778423], [57784738, 57784839], [57785172, 57785214], [57785552, 57785636], [57785851, 57785948]]
ENST00000566611	[[57769775, 57770028], [57770889, 57771195], [57775598, 57775729], [57778305, 57778423], [57784738, 57784839], [57785172, 57785214], [57785552, 57785636], [57785851, 57787179], [57787300, 57787431], [57787856, 57787907], [57788841, 57788909], [57789030, 57789150], [57789256, 57789406], [57789752, 57789829], [57789903, 57790797]]	None
ENST00000566785	[[57770674, 57770790], [57770889, 57771195], [57775598, 57775729], [57778305, 57778371]]	[[57771155, 57771195], [57775598, 57775729], [57778305, 57778371]]
ENST00000569627	[[57770884, 57771195], [57775598, 57775729], [57778305, 57778423], [57785172, 57785214], [57785552, 57785572]]	[[57771155, 57771195], [57775598, 57775729], [57778305, 57778423], [57785172, 57785214], [57785552, 57785572]]
ENST00000563127	[[57771103, 57771195], [57775598, 57775729], [57778305, 57778423], [57784738, 57784839], [57785172, 57785214], [57785552, 57785636], [57785851, 57786016]]	None
ENST00000563462	[[57787368, 57787431], [57787856, 57787907], [57788841, 57788909], [57789030, 57789150], [57789256, 57789406], [57789701, 57789829], [57789903, 57789978], [57790267, 57790384], [57790725, 57790780]]	[[57787368, 57787431], [57787856, 57787907], [57788841, 57788909], [57789030, 57789150], [57789256, 57789406], [57789701, 57789829], [57789903, 57789978], [57790267, 57790384], [57790725, 57790780]]
ENST00000569018	[[57789057, 57789150], [57789256, 57789406], [57789752, 57789978], [57790267, 57790384], [57790725, 57790807]]	None
ENST00000562542	[[57789359, 57789406], [57789701, 57789978], [57790267, 57790384], [57790725, 57790796]]	None
NM_005886	[[57769659, 57769767], [57770889, 57771195], [57775598, 57775729], [57778305, 57778423], [57784738, 57784839], [57785172, 57785214], [57785552, 57785636], [57785851, 57785967], [57786441, 57786513], [57786689, 57786840], [57786988, 57787179], [57787300, 57787431], [57787856, 57787907], [57788841, 57788909], [57789030, 57789150], [57789256, 57789406], [57789752, 57789829], [57789903, 57789978], [57790267, 57790384], [57790725, 57791162]]	[[57771155, 57771195], [57775598, 57775729], [57778305, 57778423], [57784738, 57784839], [57785172, 57785214], [57785552, 57785636], [57785851, 57785967], [57786441, 57786513], [57786689, 57786840], [57786988, 57787179], [57787300, 57787431], [57787856, 57787907], [57788841, 57788909], [57789030, 57789150], [57789256, 57789406], [57789752, 57789829], [57789903, 57789978], [57790267, 57790384], [57790725, 57790858]]

Promoter

Chrom	Start	End	Description
chr16	57769635	57769702	CAGE_peak_1_at_KATNB1_5end
chr16	57769709	57769747	CAGE_peak_2_at_KATNB1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I057583	57583460	57584776	0.2	[{'connected_gene': 'ADGRG1', 'score': 12.8}, {'connected_gene': 'ADGRG3', 'score': 12.49}, {'connected_gene': 'DRC7', 'score': 12.12}, {'connected_gene': 'KATNB1', 'score': 11.63}, {'connected_gene': 'CNGB1', 'score': 9.87}, {'connected_gene': 'CCDC102A', 'score': 5.3}, {'connected_gene': 'FAM192A', 'score': 4.68}, {'connected_gene': 'GC16P057594', 'score': 0.39}, {'connected_gene': 'GC16P057566', 'score': 0.37}, {'connected_gene': 'LOC105371291', 'score': 0.34}, {'connected_gene': 'ADGRG5', 'score': 0.23}]
chr16	GH16I057581	57581592	57582616	0.43	[{'connected_gene': 'ADGRG1', 'score': 12.4}, {'connected_gene': 'ADGRG3', 'score': 12.25}, {'connected_gene': 'DRC7', 'score': 12.12}, {'connected_gene': 'KATNB1', 'score': 11.63}, {'connected_gene': 'CNGB1', 'score': 9.66}, {'connected_gene': 'CCDC102A', 'score': 5.42}, {'connected_gene': 'GC16P057594', 'score': 0.39}, {'connected_gene': 'GC16P057566', 'score': 0.37}, {'connected_gene': 'LOC105371291', 'score': 0.31}, {'connected_gene': 'ADGRG5', 'score': 0.23}]
chr16	GH16I057739	57739726	57742504	0.31	[{'connected_gene': 'ADGRG1', 'score': 10.86}, {'connected_gene': 'CNGB1', 'score': 10.18}, {'connected_gene': 'DRC7', 'score': 6.6}, {'connected_gene': 'KIFC3', 'score': 5.08}, {'connected_gene': 'GC16M057746', 'score': 0.44}, {'connected_gene': 'KATNB1', 'score': 0.44}]
chr16	GH16I057645	57645114	57649778	2.17	[{'connected_gene': 'ADGRG1', 'score': 550.28}, {'connected_gene': 'KATNB1', 'score': 12.08}, {'connected_gene': 'RSPRY1', 'score': 11.07}, {'connected_gene': 'CNOT1', 'score': 10.91}, {'connected_gene': 'POLR2C', 'score': 9.86}, {'connected_gene': 'ADGRG5', 'score': 2.22}, {'connected_gene': 'CFAP20', 'score': 1.62}, {'connected_gene': 'GC16P057639', 'score': 0.44}, {'connected_gene': 'GC16M057649', 'score': 0.44}]
chr16	GH16I057684	57683141	57683468	0.78	[{'connected_gene': 'RSPRY1', 'score': 21.15}, {'connected_gene': 'CNOT1', 'score': 18.9}, {'connected_gene': 'ADGRG1', 'score': 13.1}, {'connected_gene': 'KATNB1', 'score': 12.0}, {'connected_gene': 'POLR2C', 'score': 9.85}, {'connected_gene': 'ADGRG3', 'score': 3.96}, {'connected_gene': 'ZNF319', 'score': 3.12}, {'connected_gene': 'FAM192A', 'score': 1.86}, {'connected_gene': 'DRC7', 'score': 0.39}, {'connected_gene': 'ENSG00000260467', 'score': 0.37}]
chr16	GH16I057683	57683703	57685647	0.31	[{'connected_gene': 'DRC7', 'score': 32.63}, {'connected_gene': 'ADGRG1', 'score': 13.1}, {'connected_gene': 'KATNB1', 'score': 12.03}, {'connected_gene': 'ENSG00000260467', 'score': 0.37}, {'connected_gene': 'ADGRG3', 'score': 0.37}]
chr16	GH16I057754	57754957	57755670	0.49	[{'connected_gene': 'LOC388282', 'score': 11.83}, {'connected_gene': 'KIFC3', 'score': 11.71}, {'connected_gene': 'CNGB1', 'score': 10.29}, {'connected_gene': 'ENSG00000276166', 'score': 0.77}, {'connected_gene': 'GC16M057746', 'score': 0.44}, {'connected_gene': 'KATNB1', 'score': 0.37}]
chr16	GH16I057756	57756106	57758037	1.11	[{'connected_gene': 'KIFC3', 'score': 18.65}, {'connected_gene': 'LOC388282', 'score': 11.61}, {'connected_gene': 'ENSG00000276166', 'score': 0.77}, {'connected_gene': 'GC16M057746', 'score': 0.44}, {'connected_gene': 'KATNB1', 'score': 0.34}]
chr16	GH16I057642	57642053	57644638	0.99	[{'connected_gene': 'CNOT1', 'score': 13.66}, {'connected_gene': 'KATNB1', 'score': 12.08}, {'connected_gene': 'RSPRY1', 'score': 11.37}, {'connected_gene': 'POLR2C', 'score': 10.59}, {'connected_gene': 'CNGB1', 'score': 9.19}, {'connected_gene': 'ADGRG1', 'score': 6.01}, {'connected_gene': 'GC16P057639', 'score': 0.77}, {'connected_gene': 'GC16M057649', 'score': 0.39}]
chr16	GH16I057734	57734440	57738244	2.08	[{'connected_gene': 'KATNB1', 'score': 550.77}, {'connected_gene': 'RSPRY1', 'score': 47.29}, {'connected_gene': 'CNOT1', 'score': 42.76}, {'connected_gene': 'SETD6', 'score': 14.17}, {'connected_gene': 'ADGRG1', 'score': 10.87}, {'connected_gene': 'CSNK2A2', 'score': 10.62}, {'connected_gene': 'CNGB1', 'score': 10.18}, {'connected_gene': 'DRC7', 'score': 7.56}, {'connected_gene': 'LOC101927556', 'score': 5.55}, {'connected_gene': 'GC16M057746', 'score': 0.39}]
chr16	GH16I057700	57700429	57702116	1.05	[{'connected_gene': 'ENSG00000260467', 'score': 550.77}, {'connected_gene': 'KATNB1', 'score': 13.4}, {'connected_gene': 'DRC7', 'score': 13.21}, {'connected_gene': 'ADGRG3', 'score': 13.09}, {'connected_gene': 'ADGRG1', 'score': 12.96}]