PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000409682	[[162164548, 162165115], [162172947, 162173080], [162175332, 162175384], [162223988, 162224060], [162224294, 162224414], [162226617, 162226688], [162227682, 162227833], [162241974, 162242082], [162247614, 162247689], [162251588, 162251714], [162265347, 162265410], [162267812, 162268228]]	[[162175336, 162175384], [162223988, 162224060], [162224294, 162224414], [162226617, 162226688], [162227682, 162227833], [162241974, 162242082], [162247614, 162247689], [162251588, 162251714], [162265347, 162265410], [162267812, 162267911]]
ENST00000477232	[[162237870, 162242082], [162247614, 162247689], [162251588, 162251714], [162265347, 162265410], [162267812, 162268226]]	None
ENST00000492908	[[162264038, 162265410], [162267812, 162268226]]	None
ENST00000478123	[[162164971, 162165115], [162172947, 162173080], [162175332, 162175533]]	None
ENST00000437630	[[162165110, 162165297], [162172947, 162173080], [162175332, 162175384], [162223988, 162224060], [162224294, 162224414], [162226617, 162226630]]	[[162175336, 162175384], [162223988, 162224060], [162224294, 162224414], [162226617, 162226630]]
NM_005805	[[162164785, 162165115], [162172947, 162173080], [162175332, 162175384], [162223988, 162224060], [162224294, 162224414], [162226617, 162226688], [162227682, 162227833], [162241974, 162242082], [162247614, 162247689], [162251588, 162251714], [162265347, 162265410], [162267812, 162268228]]	[[162175336, 162175384], [162223988, 162224060], [162224294, 162224414], [162226617, 162226688], [162227682, 162227833], [162241974, 162242082], [162247614, 162247689], [162251588, 162251714], [162265347, 162265410], [162267812, 162267911]]

Promoter

Chrom	Start	End	Description
chr2	162164918	162165013	CAGE_peak_1_at_PSMD14_5end
chr2	162165038	162165053	CAGE_peak_2_at_PSMD14_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I161307	161307300	161310231	2.1	[{'connected_gene': 'PSMD14', 'score': 550.77}, {'connected_gene': 'LOC101929512', 'score': 550.77}, {'connected_gene': 'LINC01806', 'score': 32.03}, {'connected_gene': 'TANK', 'score': 9.94}, {'connected_gene': 'GC02M161340', 'score': 0.29}]
chr2	GH02I161381	161381826	161382542	0.51	[{'connected_gene': 'LOC100506055', 'score': 12.45}, {'connected_gene': 'ENSG00000224076', 'score': 10.64}, {'connected_gene': 'SLC4A10', 'score': 10.64}, {'connected_gene': 'ENSG00000251621', 'score': 10.64}, {'connected_gene': 'RNA5SP108', 'score': 0.31}, {'connected_gene': 'PSMD14', 'score': 0.19}]
chr2	GH02I161356	161356126	161356370	0.4	[{'connected_gene': 'LOC100506055', 'score': 0.39}, {'connected_gene': 'PSMD14', 'score': 0.25}, {'connected_gene': 'RNA5SP108', 'score': 0.23}]
chr2	GH02I161340	161340801	161341401	1.03	[{'connected_gene': 'LOC100506055', 'score': 550.77}, {'connected_gene': 'GC02M161340', 'score': 550.77}, {'connected_gene': 'PSMD14', 'score': 0.29}]
chr2	GH02I161360	161360190	161360339	0.6	[{'connected_gene': 'LOC100506055', 'score': 0.37}, {'connected_gene': 'RNA5SP108', 'score': 0.25}, {'connected_gene': 'PSMD14', 'score': 0.23}]
chr2	GH02I161371	161371980	161372212	0.63	[{'connected_gene': 'LOC100506055', 'score': 11.97}, {'connected_gene': 'RNA5SP108', 'score': 0.28}, {'connected_gene': 'PSMD14', 'score': 0.21}]
chr2	GH02I161284	161282330	161282499	0.2	[{'connected_gene': 'ENSG00000225813', 'score': 550.77}, {'connected_gene': 'PSMD14', 'score': 0.31}, {'connected_gene': 'LOC101929512', 'score': 0.31}]