PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000573382	[[44184675, 44184705], [44185186, 44185973]]	None
ENST00000576476	[[44184698, 44184731], [44185186, 44185835]]	None

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I043476	43476682	43479135	2	[{'connected_gene': 'TJAP1', 'score': 550.77}, {'connected_gene': 'MYMX', 'score': 12.57}, {'connected_gene': 'RSPH9', 'score': 7.42}, {'connected_gene': 'GC06P043482', 'score': 0.77}, {'connected_gene': 'GC06P043362', 'score': 0.13}]
chr6	GH06I044312	44312135	44313973	2.13	[{'connected_gene': 'AARS2', 'score': 562.2}, {'connected_gene': 'ZNF318', 'score': 45.54}, {'connected_gene': 'ABCC10', 'score': 33.62}, {'connected_gene': 'RPS2P29', 'score': 32.97}, {'connected_gene': 'POLH', 'score': 28.46}, {'connected_gene': 'GTPBP2', 'score': 27.24}, {'connected_gene': 'POLR1C', 'score': 26.23}, {'connected_gene': 'XPO5', 'score': 23.88}, {'connected_gene': 'RPL34P14', 'score': 19.6}, {'connected_gene': 'ENSG00000271754', 'score': 18.56}, {'connected_gene': 'MYMX', 'score': 12.67}, {'connected_gene': 'CDC5L', 'score': 11.16}, {'connected_gene': 'ENSG00000271970', 'score': 11.12}, {'connected_gene': 'YIPF3', 'score': 10.01}, {'connected_gene': 'TMEM151B', 'score': 9.51}, {'connected_gene': 'TCTE1', 'score': 0.37}, {'connected_gene': 'ENSG00000272442', 'score': 0.28}]
chr6	GH06I043686	43686810	43688634	2.24	[{'connected_gene': 'MRPS18A', 'score': 550.77}, {'connected_gene': 'MYMX', 'score': 12.58}, {'connected_gene': 'RSPH9', 'score': 10.57}, {'connected_gene': 'MAD2L1BP', 'score': 10.53}, {'connected_gene': 'GTPBP2', 'score': 10.53}, {'connected_gene': 'GC06M043677', 'score': 0.44}, {'connected_gene': 'GC06P043362', 'score': 0.05}]
chr6	GH06I043624	43624351	43631726	2.34	[{'connected_gene': 'GTPBP2', 'score': 618.69}, {'connected_gene': 'MAD2L1BP', 'score': 550.77}, {'connected_gene': 'POLH', 'score': 61.08}, {'connected_gene': 'ZNF318', 'score': 57.24}, {'connected_gene': 'ABCC10', 'score': 53.86}, {'connected_gene': 'RRP36', 'score': 42.88}, {'connected_gene': 'RPS2P29', 'score': 35.13}, {'connected_gene': 'CUL7', 'score': 33.91}, {'connected_gene': 'BICRAL', 'score': 21.63}, {'connected_gene': 'XPO5', 'score': 14.05}, {'connected_gene': 'POLR1C', 'score': 13.55}, {'connected_gene': 'RPL34P14', 'score': 12.96}, {'connected_gene': 'MYMX', 'score': 12.57}, {'connected_gene': 'PEX6', 'score': 12.41}, {'connected_gene': 'AARS2', 'score': 11.59}, {'connected_gene': 'YIPF3', 'score': 11.49}, {'connected_gene': 'SLC35B2', 'score': 10.74}, {'connected_gene': 'ENSG00000271754', 'score': 10.61}, {'connected_gene': 'ENSG00000272223', 'score': 9.83}, {'connected_gene': 'PTK7', 'score': 9.69}, {'connected_gene': 'RSPH9', 'score': 8.7}, {'connected_gene': 'PIR56550', 'score': 0.44}, {'connected_gene': 'GC06P043623', 'score': 0.44}, {'connected_gene': 'GC06P043362', 'score': 0.06}]
chr6	GH06I044245	44245048	44250046	2.36	[{'connected_gene': 'HSP90AB1', 'score': 556.79}, {'connected_gene': 'ZNF318', 'score': 128.81}, {'connected_gene': 'POLH', 'score': 109.82}, {'connected_gene': 'GTPBP2', 'score': 104.43}, {'connected_gene': 'ABCC10', 'score': 87.01}, {'connected_gene': 'RPS2P29', 'score': 76.96}, {'connected_gene': 'POLR1C', 'score': 54.86}, {'connected_gene': 'AARS2', 'score': 41.52}, {'connected_gene': 'YIPF3', 'score': 31.99}, {'connected_gene': 'CDC5L', 'score': 31.95}, {'connected_gene': 'XPO5', 'score': 31.41}, {'connected_gene': 'RPL34P14', 'score': 21.46}, {'connected_gene': 'ENSG00000271970', 'score': 21.1}, {'connected_gene': 'SLC35B2', 'score': 19.44}, {'connected_gene': 'ENSG00000271754', 'score': 18.56}, {'connected_gene': 'MYMX', 'score': 12.77}, {'connected_gene': 'SLC29A1', 'score': 5.2}, {'connected_gene': 'MIR4647', 'score': 0.44}]
chr6	GH06I044040	44040234	44045150	1.75	[{'connected_gene': 'ZNF318', 'score': 85.89}, {'connected_gene': 'ABCC10', 'score': 78.37}, {'connected_gene': 'POLH', 'score': 74.43}, {'connected_gene': 'GTPBP2', 'score': 72.18}, {'connected_gene': 'CUL7', 'score': 66.48}, {'connected_gene': 'RPS2P29', 'score': 41.83}, {'connected_gene': 'RPL34P14', 'score': 32.15}, {'connected_gene': 'XPO5', 'score': 27.58}, {'connected_gene': 'POLR1C', 'score': 22.33}, {'connected_gene': 'SLC35B2', 'score': 21.73}, {'connected_gene': 'TJAP1', 'score': 18.55}, {'connected_gene': 'MYMX', 'score': 12.66}, {'connected_gene': 'AARS2', 'score': 11.62}, {'connected_gene': 'YIPF3', 'score': 10.87}, {'connected_gene': 'ENSG00000271970', 'score': 9.72}, {'connected_gene': 'MRPL14', 'score': 2.2}, {'connected_gene': 'C6orf223', 'score': 1.77}, {'connected_gene': 'VEGFA', 'score': 1.38}, {'connected_gene': 'GC06P044013', 'score': 0.31}, {'connected_gene': 'GC06M044069', 'score': 0.29}, {'connected_gene': 'LOC101929705', 'score': 0.29}]
chr6	GH06I044216	44216010	44230324	2.59	[{'connected_gene': 'SLC29A1', 'score': 564.04}, {'connected_gene': 'GTPBP2', 'score': 31.19}, {'connected_gene': 'POLH', 'score': 24.62}, {'connected_gene': 'RPS2P29', 'score': 24.3}, {'connected_gene': 'ZNF318', 'score': 21.16}, {'connected_gene': 'ABCC10', 'score': 20.02}, {'connected_gene': 'YIPF3', 'score': 19.66}, {'connected_gene': 'MYMX', 'score': 18.84}, {'connected_gene': 'SLC35B2', 'score': 11.01}, {'connected_gene': 'RPL34P14', 'score': 10.29}, {'connected_gene': 'MRPL14', 'score': 1.46}, {'connected_gene': 'GC06P044215', 'score': 0.44}, {'connected_gene': 'GC06P044236', 'score': 0.39}]
chr6	GH06I044200	44200587	44204018	1.3	[{'connected_gene': 'SLC29A1', 'score': 38.34}, {'connected_gene': 'CAPN11', 'score': 21.84}, {'connected_gene': 'HSP90AB1', 'score': 11.5}, {'connected_gene': 'NFKBIE', 'score': 10.6}, {'connected_gene': 'TMEM151B', 'score': 10.59}, {'connected_gene': 'SLC35B2', 'score': 10.55}, {'connected_gene': 'MRPL14', 'score': 10.49}, {'connected_gene': 'TMEM63B', 'score': 10.48}, {'connected_gene': 'MYMX', 'score': 5.27}, {'connected_gene': 'RN7SL811P', 'score': 0.44}]
chr6	GH06I044206	44206801	44207000	0.76	[{'connected_gene': 'CAPN11', 'score': 11.73}, {'connected_gene': 'HSP90AB1', 'score': 11.51}, {'connected_gene': 'NFKBIE', 'score': 10.61}, {'connected_gene': 'TMEM151B', 'score': 10.6}, {'connected_gene': 'SLC35B2', 'score': 10.56}, {'connected_gene': 'MRPL14', 'score': 10.48}, {'connected_gene': 'TMEM63B', 'score': 10.47}, {'connected_gene': 'RN7SL811P', 'score': 0.77}, {'connected_gene': 'MYMX', 'score': 0.39}]
chr6	GH06I044204	44204124	44204273	0.82	[{'connected_gene': 'CAPN11', 'score': 11.73}, {'connected_gene': 'HSP90AB1', 'score': 11.5}, {'connected_gene': 'NFKBIE', 'score': 10.6}, {'connected_gene': 'TMEM151B', 'score': 10.59}, {'connected_gene': 'SLC35B2', 'score': 10.56}, {'connected_gene': 'TMEM63B', 'score': 10.48}, {'connected_gene': 'MRPL14', 'score': 10.48}, {'connected_gene': 'RN7SL811P', 'score': 0.44}, {'connected_gene': 'MYMX', 'score': 0.39}]
chr6	GH06I044187	44186004	44186153	0.46	[{'connected_gene': 'LOC105375072', 'score': 550.77}, {'connected_gene': 'MYMX', 'score': 0.44}]
chr6	GH06I044186	44186401	44186600	0.56	[{'connected_gene': 'LOC105375072', 'score': 550.77}, {'connected_gene': 'MYMX', 'score': 0.44}]
chr6	GH06I044192	44192184	44193293	1.18	[{'connected_gene': 'MYMX', 'score': 550.77}, {'connected_gene': 'SLC29A1', 'score': 9.75}, {'connected_gene': 'RN7SL811P', 'score': 0.37}]
chr6	GH06I043950	43948069	43948168	0.56	[{'connected_gene': 'MYMX', 'score': 12.61}, {'connected_gene': 'LOC105375067', 'score': 0.25}, {'connected_gene': 'GC06M043993', 'score': 0.25}]
chr6	GH06I043955	43948179	43948276	0.52	[{'connected_gene': 'MYMX', 'score': 12.61}, {'connected_gene': 'LOC105375067', 'score': 0.25}, {'connected_gene': 'GC06M043993', 'score': 0.25}]
chr6	GH06I043947	43947857	43948058	0.57	[{'connected_gene': 'MYMX', 'score': 12.61}, {'connected_gene': 'LOC105375067', 'score': 0.25}, {'connected_gene': 'GC06M043993', 'score': 0.25}]