PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000299642	[[78056411, 78056638], [78062003, 78062087], [78064343, 78066003]]	[[78056496, 78056638], [78062003, 78062087], [78064343, 78064738]]
ENST00000567430	[[78056411, 78056638], [78085854, 78086046], [78099873, 78100658]]	[[78056496, 78056638], [78085854, 78085865]]
ENST00000575655	[[78056442, 78056638], [78062003, 78062087], [78064343, 78065994]]	[[78056523, 78056638], [78062003, 78062087], [78064343, 78064738]]
ENST00000565808	[[78062985, 78063044], [78064343, 78064848]]	None
NM_005752	[[78056442, 78056638], [78062003, 78062087], [78064343, 78066003]]	[[78056496, 78056638], [78062003, 78062087], [78064343, 78064738]]
NM_001244755	[[78062985, 78063044], [78064343, 78066003]]	[[78063001, 78063044], [78064343, 78064738]]

Promoter

Chrom	Start	End	Description
chr16	78056435	78056451	CAGE_peak_1_at_CLEC3A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I077832	77832783	77835762	0.88	[{'connected_gene': 'VAT1L', 'score': 11.38}, {'connected_gene': 'CLEC3A', 'score': 9.53}, {'connected_gene': 'ENSG00000278926', 'score': 0.29}, {'connected_gene': 'PPIAP50', 'score': 0.22}]
chr16	GH16I078046	78046044	78046173	0.93	[{'connected_gene': 'WWOX', 'score': 10.85}, {'connected_gene': 'KRT8P22', 'score': 0.77}, {'connected_gene': 'ENSG00000261540', 'score': 0.39}, {'connected_gene': 'CLEC3A', 'score': 0.34}]
chr16	GH16I078098	78098644	78100726	2.1	[{'connected_gene': 'WWOX', 'score': 555.51}, {'connected_gene': 'CLEC3A', 'score': 17.82}, {'connected_gene': 'ENSG00000261707', 'score': 10.77}, {'connected_gene': 'GC16M078111', 'score': 0.39}]
chr16	GH16I078072	78072504	78072653	0.64	[{'connected_gene': 'WWOX', 'score': 11.94}, {'connected_gene': 'CLEC3A', 'score': 5.34}, {'connected_gene': 'ENSG00000261540', 'score': 0.39}]
chr16	GH16I078065	78065701	78065713	0.22	[{'connected_gene': 'WWOX', 'score': 10.69}, {'connected_gene': 'ENSG00000261540', 'score': 0.44}, {'connected_gene': 'CLEC3A', 'score': 0.26}]
chr16	GH16I078051	78051124	78051213	0.59	[{'connected_gene': 'KRT8P22', 'score': 550.77}, {'connected_gene': 'CLEC3A', 'score': 11.26}, {'connected_gene': 'WWOX', 'score': 10.36}, {'connected_gene': 'LOC100131126', 'score': 0.44}, {'connected_gene': 'ENSG00000261540', 'score': 0.44}]
chr16	GH16I077970	77970953	77972282	0.66	[{'connected_gene': 'NUDT7', 'score': 10.96}, {'connected_gene': 'VAT1L', 'score': 10.49}, {'connected_gene': 'WWOX', 'score': 9.83}, {'connected_gene': 'LOC105371351', 'score': 0.34}, {'connected_gene': 'CLEC3A', 'score': 0.23}]
chr16	GH16I077951	77951904	77952053	0.52	[{'connected_gene': 'NUDT7', 'score': 10.53}, {'connected_gene': 'VAT1L', 'score': 10.1}, {'connected_gene': 'LOC105371351', 'score': 0.77}, {'connected_gene': 'CLEC3A', 'score': 0.19}]
chr16	GH16I077676	77675844	77676013	0.76	[{'connected_gene': 'NUDT7', 'score': 16.31}, {'connected_gene': 'VAT1L', 'score': 10.53}, {'connected_gene': 'CLEC3A', 'score': 10.37}, {'connected_gene': 'WWOX', 'score': 9.88}, {'connected_gene': 'ENSG00000278862', 'score': 0.37}]
chr16	GH16I077675	77675061	77675278	0.44	[{'connected_gene': 'NUDT7', 'score': 11.54}, {'connected_gene': 'VAT1L', 'score': 10.53}, {'connected_gene': 'CLEC3A', 'score': 10.37}, {'connected_gene': 'WWOX', 'score': 9.88}, {'connected_gene': 'ENSG00000278862', 'score': 0.37}]
chr16	GH16I077677	77677224	77677373	0.46	[{'connected_gene': 'NUDT7', 'score': 16.98}, {'connected_gene': 'VAT1L', 'score': 10.53}, {'connected_gene': 'CLEC3A', 'score': 10.37}, {'connected_gene': 'WWOX', 'score': 9.88}, {'connected_gene': 'ENSG00000278862', 'score': 0.34}]
chr16	GH16I077544	77544360	77556921	0.59	[{'connected_gene': 'ADAMTS18', 'score': 10.91}, {'connected_gene': 'CLEC3A', 'score': 4.89}, {'connected_gene': 'SYCE1L', 'score': 4.48}, {'connected_gene': 'LOC105376775', 'score': 0.29}, {'connected_gene': 'LINC02131', 'score': 0.26}]
chr16	GH16I077990	77990732	77995373	0.77	[{'connected_gene': 'CLEC3A', 'score': 23.16}, {'connected_gene': 'VAT1L', 'score': 10.34}, {'connected_gene': 'WWOX', 'score': 4.57}, {'connected_gene': 'LOC105371351', 'score': 0.26}]
chr16	GH16I077987	77987432	77988379	0.31	[{'connected_gene': 'CLEC3A', 'score': 17.11}, {'connected_gene': 'VAT1L', 'score': 10.34}, {'connected_gene': 'LOC105371351', 'score': 0.28}]
chr16	GH16I077966	77965739	77969136	0.49	[{'connected_gene': 'CLEC3A', 'score': 19.5}, {'connected_gene': 'WWOX', 'score': 14.86}, {'connected_gene': 'NUDT7', 'score': 11.24}, {'connected_gene': 'VAT1L', 'score': 10.5}, {'connected_gene': 'LOC105371351', 'score': 0.37}]
chr16	GH16I078002	78002801	78003600	1.03	[{'connected_gene': 'CLEC3A', 'score': 13.53}, {'connected_gene': 'WWOX', 'score': 5.22}, {'connected_gene': 'LOC105371351', 'score': 0.23}]
chr16	GH16I078022	78022499	78022558	0.5	[{'connected_gene': 'CLEC3A', 'score': 550.77}, {'connected_gene': 'KRT8P22', 'score': 0.31}, {'connected_gene': 'ENSG00000261540', 'score': 0.28}]
chr16	GH16I077961	77961011	77964636	0.65	[{'connected_gene': 'CLEC3A', 'score': 15.95}, {'connected_gene': 'NUDT7', 'score': 11.24}, {'connected_gene': 'VAT1L', 'score': 10.25}, {'connected_gene': 'WWOX', 'score': 5.41}, {'connected_gene': 'LOC105371351', 'score': 0.39}]
chr16	GH16I077965	77965239	77965732	0.31	[{'connected_gene': 'CLEC3A', 'score': 16.0}, {'connected_gene': 'NUDT7', 'score': 11.24}, {'connected_gene': 'VAT1L', 'score': 10.25}, {'connected_gene': 'LOC105371351', 'score': 0.37}]
chr16	GH16I078007	78007264	78007393	0.49	[{'connected_gene': 'CLEC3A', 'score': 0.37}, {'connected_gene': 'LOC105371351', 'score': 0.22}]
chr16	GH16I077657	77657104	77657253	0.74	[{'connected_gene': 'ENSG00000278862', 'score': 550.77}, {'connected_gene': 'NUDT7', 'score': 11.24}, {'connected_gene': 'CLEC3A', 'score': 10.54}]