PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000264463	[[24487208, 24488262], [24491684, 24491936], [24492925, 24493034], [24498506, 24498628], [24505220, 24505357], [24509674, 24509928], [24511435, 24511623], [24535220, 24535388], [24535811, 24535931], [24537488, 24537783], [24593368, 24593722], [24644702, 24645087]]	[[24487771, 24488262], [24491684, 24491936], [24492925, 24493034], [24498506, 24498628], [24505220, 24505357], [24509674, 24509928], [24511435, 24511623], [24535220, 24535388], [24535811, 24535931], [24537488, 24537783], [24593368, 24593599]]
ENST00000510477	[[24487456, 24488262], [24491684, 24491936], [24492925, 24493034], [24498506, 24498628], [24509674, 24509928], [24511435, 24511623], [24535220, 24535388], [24535811, 24535931], [24537488, 24537783], [24593368, 24593722], [24644702, 24644889]]	[[24498573, 24498628], [24509674, 24509928], [24511435, 24511623], [24535220, 24535388], [24535811, 24535931], [24537488, 24537783], [24593368, 24593599]]
ENST00000502921	[[24487254, 24488262], [24491684, 24491936], [24492925, 24493034], [24498506, 24498628], [24499446, 24499630]]	None
ENST00000503958	[[24487640, 24488262], [24491684, 24491936], [24492925, 24493072]]	None
NM_001317224	[[24487208, 24488256], [24491684, 24491936], [24492925, 24493034], [24498506, 24498628], [24505220, 24505357], [24509674, 24509928], [24511435, 24511623], [24535220, 24535388], [24535811, 24535931], [24537488, 24537783], [24593368, 24593608]]	[[24487771, 24488256], [24491684, 24491936], [24492925, 24493034], [24498506, 24498628], [24505220, 24505357], [24509674, 24509928], [24511435, 24511623], [24535220, 24535388], [24535811, 24535931], [24537488, 24537783], [24593368, 24593599]]
NM_006727	[[24487208, 24488262], [24491684, 24491936], [24492925, 24493034], [24498506, 24498628], [24505220, 24505357], [24509674, 24509928], [24511435, 24511623], [24535220, 24535388], [24535811, 24535931], [24537488, 24537783], [24593368, 24593722], [24644702, 24645087]]	[[24487771, 24488262], [24491684, 24491936], [24492925, 24493034], [24498506, 24498628], [24505220, 24505357], [24509674, 24509928], [24511435, 24511623], [24535220, 24535388], [24535811, 24535931], [24537488, 24537783], [24593368, 24593599]]
NM_001317222	[[24487208, 24488262], [24491684, 24491936], [24492925, 24493034], [24498506, 24498628], [24509674, 24509928], [24511435, 24511623], [24535220, 24535388], [24535811, 24535931], [24537488, 24537783], [24593368, 24593722], [24644702, 24645087]]	[[24487771, 24488262], [24491684, 24491778]]

Promoter

Chrom	Start	End	Description
chr5	24644821	24644834	CAGE_peak_3_at_CDH10_5end
chr5	24644839	24644850	CAGE_peak_6_at_CDH10_5end
chr5	24644851	24644868	CAGE_peak_5_at_CDH10_5end
chr5	24644931	24644947	CAGE_peak_4_at_CDH10_5end
chr5	24645032	24645068	CAGE_peak_1_at_CDH10_5end
chr5	24645078	24645096	CAGE_peak_2_at_CDH10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I024549	24549304	24549570	0.22	[{'connected_gene': 'CDH10', 'score': 1.77}, {'connected_gene': 'ENSG00000251294', 'score': 0.77}, {'connected_gene': 'PIR31830', 'score': 0.15}]
chr5	GH05I024567	24567005	24567023	0.23	[{'connected_gene': 'CDH10', 'score': 10.88}, {'connected_gene': 'ENSG00000251294', 'score': 0.39}, {'connected_gene': 'ENSG00000249562', 'score': 0.39}]
chr5	GH05I024614	24614563	24614950	0.22	[{'connected_gene': 'CDH10', 'score': 12.21}, {'connected_gene': 'GC05M024643', 'score': 0.31}, {'connected_gene': 'GC05P024585', 'score': 0.31}]
chr5	GH05I024644	24644572	24645381	1.52	[{'connected_gene': 'CDH10', 'score': 561.26}, {'connected_gene': 'GC05M024643', 'score': 550.77}]
chr5	GH05I024595	24595388	24595766	0.22	[{'connected_gene': 'ENSG00000251294', 'score': 11.03}, {'connected_gene': 'CDH10', 'score': 4.93}, {'connected_gene': 'GC05P024585', 'score': 0.44}, {'connected_gene': 'GC05M024643', 'score': 0.25}]
chr5	GH05I024740	24740052	24740218	0.22	[{'connected_gene': 'GC05M024751', 'score': 0.44}, {'connected_gene': 'CDH10', 'score': 0.15}]
chr5	GH05I024579	24579162	24579439	0.22	[{'connected_gene': 'ENSG00000249562', 'score': 550.77}, {'connected_gene': 'ENSG00000251294', 'score': 11.35}, {'connected_gene': 'CDH10', 'score': 1.96}, {'connected_gene': 'GC05P024585', 'score': 0.44}]
chr5	GH05I024547	24547272	24547421	0.52	[{'connected_gene': 'ENSG00000251294', 'score': 0.44}, {'connected_gene': 'PIR31830', 'score': 0.15}, {'connected_gene': 'CDH10', 'score': 0.15}]