PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000577730	[[61681145, 61686866], [61687822, 61688005], [61689373, 61689625], [61747744, 61747862], [61760997, 61761119], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055506]]	[[61686720, 61686866], [61687822, 61688005], [61689373, 61689625], [61747744, 61747862], [61760997, 61761119], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055307]]
ENST00000585315	[[61681145, 61688005], [61689373, 61689625], [61747744, 61747862], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055506], [62069983, 62070216]]	[[61747845, 61747862], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055307]]
ENST00000299345	[[61681145, 61681792], [61687785, 61688005], [61689373, 61689625], [61747744, 61747862], [61760997, 61761119], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055506], [62069983, 62070739]]	[[61681680, 61681792], [61687785, 61688005], [61689373, 61689625], [61747744, 61747862], [61760997, 61761119], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055307]]
ENST00000577390	[[61681145, 61688005], [61689373, 61689625], [61747744, 61747862], [61760997, 61761119], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055506], [62069983, 62070739]]	[[61687511, 61688005], [61689373, 61689625], [61747744, 61747862], [61760997, 61761119], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055307]]
ENST00000584337	[[61759069, 61761119], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055506], [62069983, 62070306]]	[[61760934, 61761119], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055307]]
ENST00000583382	[[61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055506], [62068986, 62069038]]	[[61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055307]]
ENST00000583483	[[61689463, 61689625], [61747744, 61747962]]	None
ENST00000580044	[[61701082, 61701635], [61747744, 61747862], [61748081, 61748188]]	None
ENST00000584966	[[61935033, 61935377], [62055055, 62055283]]	None
ENST00000577536	[[61744652, 61744708], [61745499, 61745555], [61747744, 61747862], [61748081, 61748175]]	None
ENST00000582242	[[61823379, 61823386], [61851382, 61851947]]	None
ENST00000577228	[[61935295, 61935377], [61952161, 61952618]]	None
ENST00000584506	[[62055063, 62055506], [62070823, 62070939]]	[[62055063, 62055307]]
ENST00000582980	[[62065894, 62065917], [62069983, 62070336]]	None
NM_001796	[[61685914, 61688005], [61689373, 61689625], [61747744, 61747862], [61760997, 61761119], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055506], [62069983, 62070739]]	[[61687511, 61688005], [61689373, 61689625], [61747744, 61747862], [61760997, 61761119], [61823249, 61823386], [61851382, 61851636], [61854829, 61855017], [61858915, 61859083], [61891022, 61891142], [61935082, 61935377], [62055055, 62055307]]

Promoter

Chrom	Start	End	Description
chr16	62070191	62070202	CAGE_peak_2_at_CDH8_5end
chr16	62070249	62070256	CAGE_peak_5_at_CDH8_5end
chr16	62070305	62070310	CAGE_peak_4_at_CDH8_5end
chr16	62070317	62070352	CAGE_peak_1_at_CDH8_5end
chr16	62070355	62070364	CAGE_peak_3_at_CDH8_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I061742	61742832	61743155	0.23	[{'connected_gene': 'RN7SKP76', 'score': 550.77}, {'connected_gene': 'CDH8', 'score': 1.38}, {'connected_gene': 'GC16P061739', 'score': 0.77}]
chr16	GH16I061926	61926917	61927066	0.46	[{'connected_gene': 'LOC105371305', 'score': 0.44}, {'connected_gene': 'GC16M061981', 'score': 0.23}, {'connected_gene': 'CDH8', 'score': 0.14}]
chr16	GH16I062037	62034457	62034606	0.31	[{'connected_gene': 'CDH8', 'score': 0.77}, {'connected_gene': 'GC16M061981', 'score': 0.23}]
chr16	GH16I062038	62036357	62036546	0.88	[{'connected_gene': 'CDH8', 'score': 550.77}, {'connected_gene': 'GC16M061981', 'score': 0.23}]
chr16	GH16I062021	62021019	62021786	0.2	[{'connected_gene': 'CDH8', 'score': 0.37}, {'connected_gene': 'GC16M061981', 'score': 0.28}]
chr16	GH16I062034	62034937	62035086	0.31	[{'connected_gene': 'CDH8', 'score': 0.77}, {'connected_gene': 'GC16M061981', 'score': 0.23}]
chr16	GH16I062035	62035657	62035786	0.38	[{'connected_gene': 'CDH8', 'score': 550.77}, {'connected_gene': 'GC16M061981', 'score': 0.23}]
chr16	GH16I062036	62035137	62035386	0.38	[{'connected_gene': 'CDH8', 'score': 550.77}, {'connected_gene': 'GC16M061981', 'score': 0.23}]
chr16	GH16I061791	61791091	61793464	0.62	[{'connected_gene': 'GC16M061797', 'score': 0.39}, {'connected_gene': 'RN7SKP76', 'score': 0.25}, {'connected_gene': 'CDH8', 'score': 0.07}]
chr16	GH16I061957	61957204	61957421	0.38	[{'connected_gene': 'GC16M061981', 'score': 0.34}, {'connected_gene': 'LOC105371305', 'score': 0.28}, {'connected_gene': 'CDH8', 'score': 0.18}]
chr16	GH16I061968	61968217	61969096	0.2	[{'connected_gene': 'GC16M061981', 'score': 0.39}, {'connected_gene': 'LOC105371305', 'score': 0.23}, {'connected_gene': 'CDH8', 'score': 0.2}]
chr16	GH16I061871	61871659	61874130	0.51	[{'connected_gene': 'PIR37105', 'score': 0.37}, {'connected_gene': 'GC16P061889', 'score': 0.37}, {'connected_gene': 'GC16M061797', 'score': 0.2}, {'connected_gene': 'CDH8', 'score': 0.1}]
chr16	GH16I061731	61731047	61731295	0.2	[{'connected_gene': 'GC16P061739', 'score': 0.44}, {'connected_gene': 'GC16P061695', 'score': 0.28}, {'connected_gene': 'CDH8', 'score': 0.06}]
chr16	GH16I061836	61836497	61837362	0.31	[{'connected_gene': 'GC16M061797', 'score': 0.29}, {'connected_gene': 'PIR37105', 'score': 0.23}, {'connected_gene': 'GC16P061889', 'score': 0.23}, {'connected_gene': 'CDH8', 'score': 0.08}]
chr16	GH16I062050	62050857	62051046	0.31	[{'connected_gene': 'GC16P062055', 'score': 0.77}, {'connected_gene': 'CDH8', 'score': 0.39}]
chr16	GH16I061887	61887949	61888646	0.98	[{'connected_gene': 'PIR37105', 'score': 550.77}, {'connected_gene': 'GC16P061889', 'score': 550.77}, {'connected_gene': 'GC16M061797', 'score': 0.17}, {'connected_gene': 'CDH8', 'score': 0.11}]
chr16	GH16I061829	61829697	61829846	0.2	[{'connected_gene': 'GC16M061797', 'score': 0.31}, {'connected_gene': 'PIR37105', 'score': 0.22}, {'connected_gene': 'GC16P061889', 'score': 0.22}, {'connected_gene': 'CDH8', 'score': 0.08}]
chr16	GH16I061828	61828045	61828501	0.2	[{'connected_gene': 'GC16M061797', 'score': 0.34}, {'connected_gene': 'PIR37105', 'score': 0.21}, {'connected_gene': 'GC16P061889', 'score': 0.21}, {'connected_gene': 'CDH8', 'score': 0.08}]