PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000558195	[[84841241, 84841337], [84842759, 84842909], [84850733, 84850986]]	[[84841253, 84841337], [84842759, 84842909], [84850733, 84850895]]
NM_001243531	[[84841241, 84841337], [84842759, 84842909], [84850733, 84850985]]	[[84841253, 84841337], [84842759, 84842909], [84850733, 84850895]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I084833	84832570	84832719	0.79	[{'connected_gene': 'ZNF592', 'score': 10.21}, {'connected_gene': 'UBE2Q2L', 'score': 4.24}, {'connected_gene': 'ALPK3', 'score': 0.37}, {'connected_gene': 'GC15P084852', 'score': 0.37}]
chr15	GH15I084816	84816588	84826227	2.03	[{'connected_gene': 'WDR73', 'score': 26.56}, {'connected_gene': 'ZNF592', 'score': 20.32}, {'connected_gene': 'ALPK3', 'score': 17.96}, {'connected_gene': 'NMB', 'score': 15.37}, {'connected_gene': 'GOLGA6L5P', 'score': 14.4}, {'connected_gene': 'ENSG00000200991', 'score': 11.86}, {'connected_gene': 'SLC28A1', 'score': 11.82}, {'connected_gene': 'GOLGA6L3', 'score': 11.4}, {'connected_gene': 'SEC11A', 'score': 10.35}, {'connected_gene': 'ENSG00000259683', 'score': 5.02}, {'connected_gene': 'SCAND2P', 'score': 4.7}, {'connected_gene': 'UBE2Q2L', 'score': 4.25}, {'connected_gene': 'GC15P084852', 'score': 0.31}]
chr15	GH15I083561	83561164	83569051	0.66	[{'connected_gene': 'ADAMTSL3', 'score': 6.03}, {'connected_gene': 'HOMER2', 'score': 5.67}, {'connected_gene': 'GOLGA6L5P', 'score': 5.56}, {'connected_gene': 'ACTG1P17', 'score': 5.13}, {'connected_gene': 'RN7SL331P', 'score': 5.0}, {'connected_gene': 'UBE2Q2L', 'score': 4.83}, {'connected_gene': 'GOLGA2P7', 'score': 4.6}, {'connected_gene': 'GC15P083560', 'score': 0.77}, {'connected_gene': 'GC15M083567', 'score': 0.77}, {'connected_gene': 'SH3GL3', 'score': 0.13}]
chr15	GH15I084714	84714243	84717679	2.32	[{'connected_gene': 'SEC11A', 'score': 550.77}, {'connected_gene': 'SCAND2P', 'score': 83.97}, {'connected_gene': 'WDR73', 'score': 74.75}, {'connected_gene': 'NMB', 'score': 39.58}, {'connected_gene': 'GOLGA6L5P', 'score': 33.07}, {'connected_gene': 'ZNF592', 'score': 28.76}, {'connected_gene': 'LINC00933', 'score': 22.65}, {'connected_gene': 'UBE2Q2P1', 'score': 21.97}, {'connected_gene': 'GOLGA6L4', 'score': 21.78}, {'connected_gene': 'CSPG4P12', 'score': 21.28}, {'connected_gene': 'ENSG00000259683', 'score': 16.05}, {'connected_gene': 'ALPK3', 'score': 15.9}, {'connected_gene': 'GOLGA6L3', 'score': 15.87}, {'connected_gene': 'DNM1P51', 'score': 13.42}, {'connected_gene': 'CSPG4P11', 'score': 12.06}, {'connected_gene': 'UBE2Q2L', 'score': 11.64}, {'connected_gene': 'LOC103171574', 'score': 11.16}, {'connected_gene': 'RN7SL331P', 'score': 4.74}, {'connected_gene': 'ENSG00000259654', 'score': 0.29}]
chr15	GH15I083970	83970187	83970934	0.38	[{'connected_gene': 'RNU6-401P', 'score': 9.71}, {'connected_gene': 'UBE2Q2L', 'score': 5.97}, {'connected_gene': 'RN7SL331P', 'score': 4.48}, {'connected_gene': 'ENSG00000274128', 'score': 0.44}, {'connected_gene': 'LOC642677', 'score': 0.14}, {'connected_gene': 'ADAMTSL3', 'score': 0.06}]
chr15	GH15I084832	84832734	84843179	1.28	[{'connected_gene': 'NMB', 'score': 48.72}, {'connected_gene': 'ALPK3', 'score': 22.4}, {'connected_gene': 'ZNF592', 'score': 16.6}, {'connected_gene': 'GOLGA6L5P', 'score': 13.7}, {'connected_gene': 'GOLGA6L4', 'score': 11.93}, {'connected_gene': 'LINC00933', 'score': 11.18}, {'connected_gene': 'CSPG4P11', 'score': 10.53}, {'connected_gene': 'WDR73', 'score': 10.4}, {'connected_gene': 'SCAND2P', 'score': 8.38}, {'connected_gene': 'ENSG00000259683', 'score': 4.65}, {'connected_gene': 'UBE2Q2L', 'score': 4.24}, {'connected_gene': 'GC15P084852', 'score': 0.39}]
chr15	GH15I083570	83570418	83576206	0.59	[{'connected_gene': 'GC15P083571', 'score': 550.77}, {'connected_gene': 'ADAMTSL3', 'score': 6.07}, {'connected_gene': 'ENSG00000259683', 'score': 5.19}, {'connected_gene': 'ACTG1P17', 'score': 5.14}, {'connected_gene': 'GOLGA6L5P', 'score': 5.09}, {'connected_gene': 'GOLGA2P7', 'score': 5.06}, {'connected_gene': 'UBE2Q2L', 'score': 5.02}, {'connected_gene': 'UBE2Q2P1', 'score': 3.97}, {'connected_gene': 'GC15P083593', 'score': 0.37}, {'connected_gene': 'SH3GL3', 'score': 0.13}]
chr15	GH15I085023	85023142	85023600	0.38	[{'connected_gene': 'GC15P085023', 'score': 550.77}, {'connected_gene': 'DNM1P51', 'score': 20.27}, {'connected_gene': 'ENSG00000259683', 'score': 18.37}, {'connected_gene': 'UBE2Q2L', 'score': 18.12}, {'connected_gene': 'GOLGA6L3', 'score': 16.73}, {'connected_gene': 'LOC103171574', 'score': 16.59}, {'connected_gene': 'CSPG4P12', 'score': 13.66}, {'connected_gene': 'GOLGA2P7', 'score': 4.42}, {'connected_gene': 'GC15P085002', 'score': 0.34}, {'connected_gene': 'PDE8A', 'score': 0.26}]
chr15	GH15I084172	84172200	84173801	1.11	[{'connected_gene': 'ENSG00000259694', 'score': 550.77}, {'connected_gene': 'UBE2Q2L', 'score': 550.77}, {'connected_gene': 'WDR73', 'score': 14.36}, {'connected_gene': 'SCAND2P', 'score': 12.07}, {'connected_gene': 'RN7SL331P', 'score': 10.7}, {'connected_gene': 'LINC00933', 'score': 9.86}]