PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000580972	[[122288456, 122288583]]	None
NR_023343	[[122288455, 122288585]]	None

Promoter

Chrom	Start	End	Description
chr2	122288448	122288467	CAGE_peak_1_at_RNU4ATAC_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I121721	121721525	121723623	1.21	[{'connected_gene': 'CLASP1', 'score': 13.21}, {'connected_gene': 'RNU4ATAC', 'score': 13.1}, {'connected_gene': 'NPM1P32', 'score': 0.39}, {'connected_gene': 'NIFK', 'score': 0.39}, {'connected_gene': 'NIFK-AS1', 'score': 0.19}]
chr2	GH02I121718	121718601	121719200	0.83	[{'connected_gene': 'CLASP1', 'score': 13.22}, {'connected_gene': 'RNU4ATAC', 'score': 13.1}, {'connected_gene': 'NPM1P32', 'score': 0.44}, {'connected_gene': 'NIFK', 'score': 0.37}, {'connected_gene': 'NIFK-AS1', 'score': 0.2}]
chr2	GH02I121541	121541194	121541547	0.22	[{'connected_gene': 'CLASP1', 'score': 5.5}, {'connected_gene': 'RNU4ATAC', 'score': 0.39}, {'connected_gene': 'GC02P121556', 'score': 0.37}]
chr2	GH02I121539	121539401	121539800	0.49	[{'connected_gene': 'CLASP1', 'score': 4.74}, {'connected_gene': 'RNU4ATAC', 'score': 0.44}, {'connected_gene': 'GC02P121556', 'score': 0.37}]
chr2	GH02I121569	121569134	121570581	0.31	[{'connected_gene': 'RNU4ATAC', 'score': 11.84}, {'connected_gene': 'CLASP1', 'score': 11.75}, {'connected_gene': 'LINC01823', 'score': 6.2}, {'connected_gene': 'GC02P121556', 'score': 0.39}, {'connected_gene': 'ENSG00000222467', 'score': 0.29}]
chr2	GH02I121564	121564096	121569048	1.09	[{'connected_gene': 'RNU4ATAC', 'score': 11.84}, {'connected_gene': 'CLASP1', 'score': 11.74}, {'connected_gene': 'LINC01823', 'score': 6.2}, {'connected_gene': 'GC02P121556', 'score': 0.44}, {'connected_gene': 'ENSG00000222467', 'score': 0.28}]
chr2	GH02I121534	121534125	121535191	0.89	[{'connected_gene': 'RNU4ATAC', 'score': 0.77}, {'connected_gene': 'GC02P121556', 'score': 0.34}, {'connected_gene': 'CLASP1', 'score': 0.14}]
chr2	GH02I121524	121524431	121533647	2.04	[{'connected_gene': 'ENSG00000265451', 'score': 550.77}, {'connected_gene': 'RNU4ATAC', 'score': 550.77}, {'connected_gene': 'GC02P121532', 'score': 550.77}, {'connected_gene': 'TSN', 'score': 10.56}, {'connected_gene': 'NIFK', 'score': 10.56}, {'connected_gene': 'LINC01823', 'score': 6.23}, {'connected_gene': 'CLASP1', 'score': 4.79}, {'connected_gene': 'GC02M121346', 'score': 0.13}]