PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000333206	[[32831031, 32834345], [32843476, 32843621], [32843908, 32844419], [32870047, 32870172]]	[[32833413, 32834345], [32843476, 32843621], [32843908, 32844316]]
ENST00000420878	[[32831031, 32834345], [32843476, 32843621], [32843908, 32844419], [32847439, 32847643], [32870047, 32870196]]	[[32833413, 32834345], [32843476, 32843621], [32843908, 32844316]]
ENST00000590777	[[32832557, 32834585]]	None
ENST00000589178	[[32840606, 32843204], [32843476, 32843621], [32843908, 32844419], [32870047, 32870161]]	[[32843091, 32843204], [32843476, 32843621], [32843908, 32844316]]
ENST00000383091	[[32843091, 32843204], [32843476, 32843621], [32843908, 32844419], [32847439, 32847643], [32870047, 32870196]]	[[32843091, 32843204], [32843476, 32843621], [32843908, 32844316]]
ENST00000588448	[[32843259, 32843621], [32843908, 32844010]]	[[32843447, 32843621], [32843908, 32844010]]
ENST00000601405	[[32843259, 32843602], [32844181, 32844348]]	[[32843581, 32843602], [32844181, 32844316]]
ENST00000592278	[[32843548, 32843677], [32843908, 32844419], [32870094, 32870185]]	[[32843647, 32843677], [32843908, 32844316]]
ENST00000592598	[[32844109, 32844419], [32847439, 32847646], [32847841, 32847912]]	[[32844109, 32844316]]
ENST00000592211	[[32844173, 32844419], [32847439, 32847643], [32870094, 32870193]]	[[32844173, 32844316]]
ENST00000588832	[[32869308, 32869787], [32870094, 32870196]]	None
NM_001166012	[[32831021, 32834345], [32843476, 32843621], [32843908, 32844419], [32847439, 32847643], [32870047, 32870209]]	[[32833413, 32834345], [32843476, 32843621], [32843908, 32844316]]
NM_001112734	[[32831021, 32834345], [32843476, 32843621], [32843908, 32844419], [32870047, 32870209]]	[[32833413, 32834345], [32843476, 32843621], [32843908, 32844316]]
NM_001288711	[[32831021, 32834345], [32870094, 32870209]]	[[32833413, 32834337]]

Promoter

Chrom	Start	End	Description
chr18	32870122	32870133	CAGE_peak_2_at_ZSCAN30_5end
chr18	32870148	32870223	CAGE_peak_1_at_ZSCAN30_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr18	GH18I035230	35230957	35231400	1.06	[{'connected_gene': 'ZNF396', 'score': 10.65}, {'connected_gene': 'ZSCAN30', 'score': 4.26}, {'connected_gene': 'ZNF397', 'score': 0.44}, {'connected_gene': 'PIR47170', 'score': 0.44}]
chr18	GH18I034492	34492677	34494800	1.97	[{'connected_gene': 'DTNA', 'score': 550.77}, {'connected_gene': 'ZNF397', 'score': 10.68}, {'connected_gene': 'ZSCAN30', 'score': 4.06}, {'connected_gene': 'RPL10AP13', 'score': 0.18}]
chr18	GH18I034591	34591282	34594925	1.74	[{'connected_gene': 'DTNA', 'score': 550.15}, {'connected_gene': 'ZSCAN30', 'score': 4.32}, {'connected_gene': 'RPL10AP13', 'score': 0.37}, {'connected_gene': 'ENSG00000268873', 'score': 0.09}]
chr18	GH18I035495	35495482	35498608	2.35	[{'connected_gene': 'INO80C', 'score': 558.31}, {'connected_gene': 'ENSG00000267140', 'score': 550.77}, {'connected_gene': 'ENSG00000268573', 'score': 87.13}, {'connected_gene': 'ZNF397', 'score': 80.97}, {'connected_gene': 'ZSCAN30', 'score': 53.0}, {'connected_gene': 'ELP2', 'score': 48.88}, {'connected_gene': 'RPRD1A', 'score': 29.99}, {'connected_gene': 'C18orf21', 'score': 20.32}, {'connected_gene': 'ZNF271P', 'score': 11.06}, {'connected_gene': 'ZNF396', 'score': 10.37}, {'connected_gene': 'ENSG00000279074', 'score': 0.39}]
chr18	GH18I035249	35249710	35249817	0.22	[{'connected_gene': 'ZSCAN30', 'score': 5.15}, {'connected_gene': 'ZNF397', 'score': 2.71}, {'connected_gene': 'PIR50065', 'score': 0.77}, {'connected_gene': 'PIR48276', 'score': 0.77}]
chr18	GH18I035266	35266817	35268626	1.59	[{'connected_gene': 'ZSCAN30', 'score': 561.94}, {'connected_gene': 'ENSG00000274184', 'score': 550.77}, {'connected_gene': 'ZNF24', 'score': 7.17}, {'connected_gene': 'ENSG00000279989', 'score': 0.39}, {'connected_gene': 'ZNF397', 'score': 0.31}]
chr18	GH18I035388	35388874	35389857	0.51	[{'connected_gene': 'ZSCAN30', 'score': 7.65}, {'connected_gene': 'ZNF24', 'score': 5.07}, {'connected_gene': 'RPL7AP67', 'score': 0.44}, {'connected_gene': 'LOC105372063', 'score': 0.37}]
chr18	GH18I035109	35109590	35112048	0.95	[{'connected_gene': 'ZSCAN30', 'score': 5.3}, {'connected_gene': 'MAPRE2', 'score': 4.89}, {'connected_gene': 'ENSG00000280096', 'score': 0.31}, {'connected_gene': 'ENSG00000274400', 'score': 0.29}]
chr18	GH18I035325	35325037	35325206	0.2	[{'connected_gene': 'ZSCAN30', 'score': 12.35}, {'connected_gene': 'ENSG00000274918', 'score': 0.44}, {'connected_gene': 'GC18M035337', 'score': 0.39}, {'connected_gene': 'ZNF271P', 'score': 0.29}]
chr18	GH18I035153	35153592	35154706	0.69	[{'connected_gene': 'ZSCAN30', 'score': 5.37}, {'connected_gene': 'ENSG00000274400', 'score': 0.44}, {'connected_gene': 'PIR47170', 'score': 0.19}]
chr18	GH18I035281	35281780	35283283	0.46	[{'connected_gene': 'PIR57805', 'score': 550.77}, {'connected_gene': 'ZNF24', 'score': 6.99}, {'connected_gene': 'ZNF396', 'score': 6.24}, {'connected_gene': 'MAPRE2', 'score': 4.73}, {'connected_gene': 'ZSCAN30', 'score': 0.44}, {'connected_gene': 'ENSG00000268573', 'score': 0.44}, {'connected_gene': 'ENSG00000274184', 'score': 0.39}]
chr18	GH18I035289	35289144	35291444	2.1	[{'connected_gene': 'ENSG00000268573', 'score': 573.92}, {'connected_gene': 'ZSCAN30', 'score': 555.26}, {'connected_gene': 'ZNF271P', 'score': 550.77}, {'connected_gene': 'ZNF397', 'score': 31.34}, {'connected_gene': 'C18orf21', 'score': 12.57}, {'connected_gene': 'ZNF24', 'score': 8.02}, {'connected_gene': 'GC18M035301', 'score': 0.39}, {'connected_gene': 'PIR53427', 'score': 0.39}]
chr18	GH18I035268	35268937	35269086	0.2	[{'connected_gene': 'ENSG00000274184', 'score': 550.77}, {'connected_gene': 'ZSCAN30', 'score': 11.94}, {'connected_gene': 'PIR57805', 'score': 0.37}]